| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is nadE [H]
Identifier: 222524771
GI number: 222524771
Start: 1894441
End: 1896534
Strand: Reverse
Name: nadE [H]
Synonym: Chy400_1498
Alternate gene names: 222524771
Gene position: 1896534-1894441 (Counterclockwise)
Preceding gene: 222524776
Following gene: 222524770
Centisome position: 35.99
GC content: 59.46
Gene sequence:
>2094_bases ATGCAACCATTCTTCTCGATCTATCGCCACAATCTGGCCCGATTAGCGGTGGCTATTCCCGCAGTACGGATTGCCGAACC GGTCTTCAACGCTGAACGAACGATTGCTCTGGCCCGGCGTGCTGCGGCTGAAGGGGCAATTCTCGTGCTGTTCCCCGAAC TCGGCATCTCGGCCTACAGCAACGATGATCTCTTTCAGCAGTCAACCCTCCTCGATGCGGTTGAGCAGGCACTACTCACG ATTGCTGCGGCGGCCAACGACATCAATGCCCTGCTGCTCGTCGGCGCTCCCCTTCGGCACGAAGGCCGGCTTTTCAACTG TGCGGTAGCCATCTACCGCGGACAGATTATTGGCGTTACGCCGAAGAGTTATTTACCGAATTACCGGGAATTTTACGAAA AACGCCATTTTGCCGCTGCCCGTGATGCTATCGGTGACACTATCCAACTGGCCGGTCAGAACGTACCTTTTGGCACCGAT GTAATCTATGACGTTACAACCCTGCCCGGTCTTGCTGTACACGTTGAAATTTGTGAGGATTTGTGGACGCCGCTCCCACC CAGTACCTTTGCGGCGCTAGCCGGGGCGACAGTTCTCTGCAATCTGTCGGCATCAAACATCACGATTGGCAAAGCCGATT ACCGGCGGGCGTTGTGTATGAATCAATCGGCGCGCACCCTTGCCGCCTACCTCTACTCGGCTGCCGGGCCGGGTGAGAGT ACGACCGACCTGGCGTGGGATGGACACGCGCTGATCTGCGAAAACGGCGAGCTGTTGGCCGAGTCGCAGCGCTTCTGCGA CGAGGAACAGATCATTTTTGCCGATGTCGATCTGGAACGCCTGCTTCAGGAGCGCGCCCGCCAGACCAGCTTTAGCGACA GTATTGGCGACTACCGCTCACACGTGCGTCACATGCGCCGTATCCCGCTCGCCATCACCCTGCCGGTTGTGACCGACCTG CGGCGCAGTGTTGCCCGCTTCCCCTTTGTGCCCAACGATCCGGCGACCCGTGATGAACGCTGCTACGAAGCCTACAACAT CCAGATGCACGGTCTCATGCAGCGCATGCGCAGTGCTGGAGTGGAAAAAGTGGTGATTGGTGTTTCGGGCGGTCTCGACA GCACCCAGGCGCTGATCGTCGCGGCCCGCACGATGGATCGGCTGGGGTTGCCGCGTCAGAATGTCCTGGCCTACACGATG CCCGGCTTTGCGACCAGCAGCCAAACCCGGCGCAACGCGCACGCGCTGATGACAGCGCTCGGCGTGAGTGCGCATGAAAT TGACATCCGCCCCTCGGCGTTGCAAATGCTCCGCGATCTGGGCCATCCGGCAGGCGAAGGCGCAGCCGTCTACGATGTCA CGTTTGAAAATGTACAGGCCGGCGAACGAACCTCGCATCTGTTTCGCCTCGCCAACTACCACAATGCGATTGTCGTCGGC ACCGGTGATCTGAGTGAATTAGCACTCGGCTGGTGTACCTACGGAGTAGGCGATCAGATGGCGCACTACAACGTCAATGC GTCGGTGCCGAAAACCCTCATCCAGCACCTGATTCGCTACGTCATCCGCAGCGGCGAACTGGGAGACGAAGCCAACCGGG TGCTAGAGTCAATTCTGGCGACTGAAATCTCGCCTGAGCTGGTACCGGCTTCGAGCAGCGACGACAAACCGGCGCAACGC ACCGAAGAGATTATCGGGCCATACGCGCTTCAGGATTTCAACCTCTACTACATCACCCGCTACGGCTTTCGTCCGGGTAA AGTTGCCTTCCTCGCCATGCACGCCTGGGGTAATGCCGACGTTGGTGCCTGGCCAGAGGGGTTACCGGCAAACGAGCGGC GCGCTTACGACCTGCCGACCATCCTGCACTGGTTACGGGTCTTCCTGTTCCGCTTCTTCCAGATCAGCCAGTTCAAGCGG TCGGCCATGCCCAACGGTCCCAAAGTCGGCTCAGGTGGCTCGCTCTCGCCGCGCGGCGATTGGCGGGCACCGAGTGATGC GCGGGCAACGGTGTGGCTGGCTGAACTTGATCGGGTGGTGGCGGAGGTGGGGGATACGCTTGAGAAAAAGCATTGGGATG TGCGAAATGCATGA
Upstream 100 bases:
>100_bases GAAATCACCTTTCTGGCAGGCCGACATTTCTTTCAGGTAACGGCTATCCTGATAGCACGCCAACCTGTTCATTAATCGCA ACACAGCCGTGGATGATTAT
Downstream 100 bases:
>100_bases TCGCACCGATCTGACGCATGAGAAAGTGAGATAATCACCAGCGAAGAGAAAATCGGTGTCATCCACGCAAAGCCATCACA CCGTACCACAACGAGTCTGG
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 697; Mature: 697
Protein sequence:
>697_residues MQPFFSIYRHNLARLAVAIPAVRIAEPVFNAERTIALARRAAAEGAILVLFPELGISAYSNDDLFQQSTLLDAVEQALLT IAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVTPKSYLPNYREFYEKRHFAAARDAIGDTIQLAGQNVPFGTD VIYDVTTLPGLAVHVEICEDLWTPLPPSTFAALAGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGES TTDLAWDGHALICENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRSHVRHMRRIPLAITLPVVTDL RRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAGVEKVVIGVSGGLDSTQALIVAARTMDRLGLPRQNVLAYTM PGFATSSQTRRNAHALMTALGVSAHEIDIRPSALQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVG TGDLSELALGWCTYGVGDQMAHYNVNASVPKTLIQHLIRYVIRSGELGDEANRVLESILATEISPELVPASSSDDKPAQR TEEIIGPYALQDFNLYYITRYGFRPGKVAFLAMHAWGNADVGAWPEGLPANERRAYDLPTILHWLRVFLFRFFQISQFKR SAMPNGPKVGSGGSLSPRGDWRAPSDARATVWLAELDRVVAEVGDTLEKKHWDVRNA
Sequences:
>Translated_697_residues MQPFFSIYRHNLARLAVAIPAVRIAEPVFNAERTIALARRAAAEGAILVLFPELGISAYSNDDLFQQSTLLDAVEQALLT IAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVTPKSYLPNYREFYEKRHFAAARDAIGDTIQLAGQNVPFGTD VIYDVTTLPGLAVHVEICEDLWTPLPPSTFAALAGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGES TTDLAWDGHALICENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRSHVRHMRRIPLAITLPVVTDL RRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAGVEKVVIGVSGGLDSTQALIVAARTMDRLGLPRQNVLAYTM PGFATSSQTRRNAHALMTALGVSAHEIDIRPSALQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVG TGDLSELALGWCTYGVGDQMAHYNVNASVPKTLIQHLIRYVIRSGELGDEANRVLESILATEISPELVPASSSDDKPAQR TEEIIGPYALQDFNLYYITRYGFRPGKVAFLAMHAWGNADVGAWPEGLPANERRAYDLPTILHWLRVFLFRFFQISQFKR SAMPNGPKVGSGGSLSPRGDWRAPSDARATVWLAELDRVVAEVGDTLEKKHWDVRNA >Mature_697_residues MQPFFSIYRHNLARLAVAIPAVRIAEPVFNAERTIALARRAAAEGAILVLFPELGISAYSNDDLFQQSTLLDAVEQALLT IAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVTPKSYLPNYREFYEKRHFAAARDAIGDTIQLAGQNVPFGTD VIYDVTTLPGLAVHVEICEDLWTPLPPSTFAALAGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGES TTDLAWDGHALICENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRSHVRHMRRIPLAITLPVVTDL RRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAGVEKVVIGVSGGLDSTQALIVAARTMDRLGLPRQNVLAYTM PGFATSSQTRRNAHALMTALGVSAHEIDIRPSALQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVG TGDLSELALGWCTYGVGDQMAHYNVNASVPKTLIQHLIRYVIRSGELGDEANRVLESILATEISPELVPASSSDDKPAQR TEEIIGPYALQDFNLYYITRYGFRPGKVAFLAMHAWGNADVGAWPEGLPANERRAYDLPTILHWLRVFLFRFFQISQFKR SAMPNGPKVGSGGSLSPRGDWRAPSDARATVWLAELDRVVAEVGDTLEKKHWDVRNA
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=594, Percent_Identity=23.5690235690236, Blast_Score=99, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17538756, Length=259, Percent_Identity=29.3436293436293, Blast_Score=105, Evalue=8e-23, Organism=Saccharomyces cerevisiae, GI6321865, Length=638, Percent_Identity=23.6677115987461, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI24641841, Length=647, Percent_Identity=23.6476043276662, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24641843, Length=647, Percent_Identity=23.6476043276662, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 76720; Mature: 76720
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPFFSIYRHNLARLAVAIPAVRIAEPVFNAERTIALARRAAAEGAILVLFPELGISAYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC NDDLFQQSTLLDAVEQALLTIAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECCEEEEEC PKSYLPNYREFYEKRHFAAARDAIGDTIQLAGQNVPFGTDVIYDVTTLPGLAVHVEICED CHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEECCCCCCCEEEHHHHHH LWTPLPPSTFAALAGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGES HCCCCCCHHHHHHCCCEEEEECCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC TTDLAWDGHALICENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRS CCCEEECCCEEEECCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHH HVRHMRRIPLAITLPVVTDLRRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAG HHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VEKVVIGVSGGLDSTQALIVAARTMDRLGLPRQNVLAYTMPGFATSSQTRRNAHALMTAL CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH GVSAHEIDIRPSALQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVG CCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEE TGDLSELALGWCTYGVGDQMAHYNVNASVPKTLIQHLIRYVIRSGELGDEANRVLESILA CCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TEISPELVPASSSDDKPAQRTEEIIGPYALQDFNLYYITRYGFRPGKVAFLAMHAWGNAD HCCCCCEECCCCCCCCHHHHHHHHHCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCCC VGAWPEGLPANERRAYDLPTILHWLRVFLFRFFQISQFKRSAMPNGPKVGSGGSLSPRGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WRAPSDARATVWLAELDRVVAEVGDTLEKKHWDVRNA CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQPFFSIYRHNLARLAVAIPAVRIAEPVFNAERTIALARRAAAEGAILVLFPELGISAYS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC NDDLFQQSTLLDAVEQALLTIAAAANDINALLLVGAPLRHEGRLFNCAVAIYRGQIIGVT CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEECCEEEEEC PKSYLPNYREFYEKRHFAAARDAIGDTIQLAGQNVPFGTDVIYDVTTLPGLAVHVEICED CHHHCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEECCCCCCCEEEHHHHHH LWTPLPPSTFAALAGATVLCNLSASNITIGKADYRRALCMNQSARTLAAYLYSAAGPGES HCCCCCCHHHHHHCCCEEEEECCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC TTDLAWDGHALICENGELLAESQRFCDEEQIIFADVDLERLLQERARQTSFSDSIGDYRS CCCEEECCCEEEECCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHH HVRHMRRIPLAITLPVVTDLRRSVARFPFVPNDPATRDERCYEAYNIQMHGLMQRMRSAG HHHHHHHCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VEKVVIGVSGGLDSTQALIVAARTMDRLGLPRQNVLAYTMPGFATSSQTRRNAHALMTAL CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH GVSAHEIDIRPSALQMLRDLGHPAGEGAAVYDVTFENVQAGERTSHLFRLANYHNAIVVG CCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEE TGDLSELALGWCTYGVGDQMAHYNVNASVPKTLIQHLIRYVIRSGELGDEANRVLESILA CCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TEISPELVPASSSDDKPAQRTEEIIGPYALQDFNLYYITRYGFRPGKVAFLAMHAWGNAD HCCCCCEECCCCCCCCHHHHHHHHHCCEEEECCCEEEEEEECCCCCCEEEEEEECCCCCC VGAWPEGLPANERRAYDLPTILHWLRVFLFRFFQISQFKRSAMPNGPKVGSGGSLSPRGD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WRAPSDARATVWLAELDRVVAEVGDTLEKKHWDVRNA CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]