| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524768
Identifier: 222524768
GI number: 222524768
Start: 1891250
End: 1891684
Strand: Reverse
Name: 222524768
Synonym: Chy400_1495
Alternate gene names: NA
Gene position: 1891684-1891250 (Counterclockwise)
Preceding gene: 222524770
Following gene: 222524764
Centisome position: 35.9
GC content: 50.57
Gene sequence:
>435_bases TTGCGTACCATTATCGTCTTGTGCCTGTTGTTGAGCTTGACCGCTTGCACCACAGCTCAACCTACACCCACGCCCACTGA TGAATTAATCATTCCAACCCCGGTAAGTGGGCAGGCTGTTGTCTATGGTCGGGTACTTTCCAGTATTACTGGACAACCAA TCTATCGAGTTCGGGTGGCTTTCGCGGAAGTGATTCGCAATGGTGAAACGGCGATCTTTGTCGATGACGCTGCCTTTAGT CCTTTCGCCGAAACTGACACCGATGGTCGTTTTGTGCTGCCAGATTTGCCACCCAAAGAGTACGTGATTGTCATCGGTGA CCCGTTTGGCCTCAATGATGTGGTGCGTAATCCTGATGGATTACCAAAGGTGTGGAACATCGAAGCCGGTCAACAGCTTG ATATTGGCGAGGTGCGTGTCAATATCGGGGTCTAA
Upstream 100 bases:
>100_bases AGATCGCGCTGGTTGTGCTTGTGTAAAAATGGAAGAAGCTACGTTCTTCTGAGATAACAAGATTTATTCGCTCGTTGCCA ATGATGAGGTGGAGGGAGCC
Downstream 100 bases:
>100_bases TACTTTTGGGTTATTGGCTTGTTTTGGGTATTAATGAGCGATACAGCCGTTCATATTGTCGCGCCGCAGCGGTGATCGAG AATTGTGCTGCTCGTTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRTIIVLCLLLSLTACTTAQPTPTPTDELIIPTPVSGQAVVYGRVLSSITGQPIYRVRVAFAEVIRNGETAIFVDDAAFS PFAETDTDGRFVLPDLPPKEYVIVIGDPFGLNDVVRNPDGLPKVWNIEAGQQLDIGEVRVNIGV
Sequences:
>Translated_144_residues MRTIIVLCLLLSLTACTTAQPTPTPTDELIIPTPVSGQAVVYGRVLSSITGQPIYRVRVAFAEVIRNGETAIFVDDAAFS PFAETDTDGRFVLPDLPPKEYVIVIGDPFGLNDVVRNPDGLPKVWNIEAGQQLDIGEVRVNIGV >Mature_144_residues MRTIIVLCLLLSLTACTTAQPTPTPTDELIIPTPVSGQAVVYGRVLSSITGQPIYRVRVAFAEVIRNGETAIFVDDAAFS PFAETDTDGRFVLPDLPPKEYVIVIGDPFGLNDVVRNPDGLPKVWNIEAGQQLDIGEVRVNIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15549; Mature: 15549
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIIVLCLLLSLTACTTAQPTPTPTDELIIPTPVSGQAVVYGRVLSSITGQPIYRVRVA CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHCCCCCHHHHHHH FAEVIRNGETAIFVDDAAFSPFAETDTDGRFVLPDLPPKEYVIVIGDPFGLNDVVRNPDG HHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHCCCCC LPKVWNIEAGQQLDIGEVRVNIGV CCEEEECCCCCEECCCEEEEEECC >Mature Secondary Structure MRTIIVLCLLLSLTACTTAQPTPTPTDELIIPTPVSGQAVVYGRVLSSITGQPIYRVRVA CHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHCCCCCHHHHHHH FAEVIRNGETAIFVDDAAFSPFAETDTDGRFVLPDLPPKEYVIVIGDPFGLNDVVRNPDG HHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHHCCCCC LPKVWNIEAGQQLDIGEVRVNIGV CCEEEECCCCCEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA