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The map label for this gene is recA

Identifier: 222524755

GI number: 222524755

Start: 1876385

End: 1877440

Strand: Reverse

Name: recA

Synonym: Chy400_1482

Alternate gene names: 222524755

Gene position: 1877440-1876385 (Counterclockwise)

Preceding gene: 222524764

Following gene: 222524741

Centisome position: 35.63

GC content: 56.82

Gene sequence:

>1056_bases
ATGGCTATCACCCCGGAGAAAGAAAAAGCGCTCGCGGCAACAATGGCGCAGATCGACCGCAAGTTCGGTAAAGGTTCGAT
CATGAAGATGGGCGAGGCGAGCAGTCGGCTGGCAATTGAAGCCATCCCGACCGGTTCCATCGCGCTCGATATTGCCCTCG
GCATTGGTGGTGTACCGCGAGGGCGCGTTGTCGAAATCTTTGGCCCTGAGAGCAGCGGTAAAACCACACTGGCCCAGCAT
ATCATTGCAGAAGCGCAGAAGATGGGCGGAGTCTGCGCCTTCATCGACGCCGAGCATGCCTTTGACCCGGTCTACGCTGC
GCGGTGTGGAGTCAACATTGATGACTTGCTCGTTTCGCAGCCGGACACCGGCGAACAGGCGCTCGAAATCTGTGAGATGC
TGGTTCGCTCGAATGCAATTGACGTGATCGTTATCGACTCGGTCGCCGCTCTGGTACCGCGTGCCGAAATCGAGGGCGAG
ATGGGCGATTCGATGCCCGGTATGCAGGCCCGGCTGATGAGTCAGGCGTTGCGCAAGTTGTCAGGTGCCATCAGCAAGAG
CCGTACAGTCGTAATCTTCATCAATCAGTTGCGCATGAAGATCGGCGTTATGTTCGGCTCGCCGGAAACCACGACCGGTG
GTCAGGCCCTGAAGTTCTACGCCTCGGTACGGCTCGACATTCGTCGTGTGGAAACCCTCAAGCAAGGGCAGGAGGCAATC
GGTTCGCGGGTACGGGTGAAGGTGATCAAGAATAAGGTTGCACCGCCCTTCCGCCAGGCGGAGTTCGATATTCTGGCCAA
CGAAGGTATCTCGCGTGAGGGCAATATCATCGATATCGGTACTGAATTGGGGATTATTCGCAAGAGTGGCGCATGGTTCT
ACCTCGGCGAGGATCGGCTCGGCCAGGGGCGGGAAAATGTGCGCGAGTTTCTGAAGAATAATCCTGCCCTTACCGATGAG
ATCGAGCGCCTGATCAAAGCGCAGGCATTGACGAATCCAACGGTGATTGCGCCGAGCGTCGATGTTGGTGACGATGACGC
TATTTTTGAAGAGTAG

Upstream 100 bases:

>100_bases
TATGTACGGGGCAGGCAACGGCGTTGACAGCGCCCTCCCCATCAAGTAGAGTAGCAAGAGGAGTGTACGTGTGAGCAAGA
ACAATGGAGGAGCGCCCGCG

Downstream 100 bases:

>100_bases
TACGCTCGGCGTGCGAACGAAATAGCGATCTTGGGGGCAGGTTTTGAAACCTGCCCTTTTCTGTTGGTCCAATGGTAGGG
TGGTTATTGGTGGCAAGATT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MAITPEKEKALAATMAQIDRKFGKGSIMKMGEASSRLAIEAIPTGSIALDIALGIGGVPRGRVVEIFGPESSGKTTLAQH
IIAEAQKMGGVCAFIDAEHAFDPVYAARCGVNIDDLLVSQPDTGEQALEICEMLVRSNAIDVIVIDSVAALVPRAEIEGE
MGDSMPGMQARLMSQALRKLSGAISKSRTVVIFINQLRMKIGVMFGSPETTTGGQALKFYASVRLDIRRVETLKQGQEAI
GSRVRVKVIKNKVAPPFRQAEFDILANEGISREGNIIDIGTELGIIRKSGAWFYLGEDRLGQGRENVREFLKNNPALTDE
IERLIKAQALTNPTVIAPSVDVGDDDAIFEE

Sequences:

>Translated_351_residues
MAITPEKEKALAATMAQIDRKFGKGSIMKMGEASSRLAIEAIPTGSIALDIALGIGGVPRGRVVEIFGPESSGKTTLAQH
IIAEAQKMGGVCAFIDAEHAFDPVYAARCGVNIDDLLVSQPDTGEQALEICEMLVRSNAIDVIVIDSVAALVPRAEIEGE
MGDSMPGMQARLMSQALRKLSGAISKSRTVVIFINQLRMKIGVMFGSPETTTGGQALKFYASVRLDIRRVETLKQGQEAI
GSRVRVKVIKNKVAPPFRQAEFDILANEGISREGNIIDIGTELGIIRKSGAWFYLGEDRLGQGRENVREFLKNNPALTDE
IERLIKAQALTNPTVIAPSVDVGDDDAIFEE
>Mature_350_residues
AITPEKEKALAATMAQIDRKFGKGSIMKMGEASSRLAIEAIPTGSIALDIALGIGGVPRGRVVEIFGPESSGKTTLAQHI
IAEAQKMGGVCAFIDAEHAFDPVYAARCGVNIDDLLVSQPDTGEQALEICEMLVRSNAIDVIVIDSVAALVPRAEIEGEM
GDSMPGMQARLMSQALRKLSGAISKSRTVVIFINQLRMKIGVMFGSPETTTGGQALKFYASVRLDIRRVETLKQGQEAIG
SRVRVKVIKNKVAPPFRQAEFDILANEGISREGNIIDIGTELGIIRKSGAWFYLGEDRLGQGRENVREFLKNNPALTDEI
ERLIKAQALTNPTVIAPSVDVGDDDAIFEE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=350, Percent_Identity=59.4285714285714, Blast_Score=436, Evalue=1e-123,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CHLAA (O52394)

Other databases:

- EMBL:   AF037259
- EMBL:   CP000909
- RefSeq:   YP_001634976.1
- ProteinModelPortal:   O52394
- SMR:   O52394
- GeneID:   5828464
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_1359
- HOGENOM:   HBG339889
- OMA:   GRDNTIT
- ProtClustDB:   PRK09354
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 37837; Mature: 37706

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITPEKEKALAATMAQIDRKFGKGSIMKMGEASSRLAIEAIPTGSIALDIALGIGGVPR
CCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC
GRVVEIFGPESSGKTTLAQHIIAEAQKMGGVCAFIDAEHAFDPVYAARCGVNIDDLLVSQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHCCCCHHHHHCCCCHHHHEECC
PDTGEQALEICEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKL
CCCCHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
SGAISKSRTVVIFINQLRMKIGVMFGSPETTTGGQALKFYASVRLDIRRVETLKQGQEAI
HHHHHCCCEEEEEEEHHEEEEEEEECCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHH
GSRVRVKVIKNKVAPPFRQAEFDILANEGISREGNIIDIGTELGIIRKSGAWFYLGEDRL
CCCEEEEEEHHCCCCCHHHCCHHEEECCCCCCCCCEEEECCCCCEEEECCCEEEECCCCC
GQGRENVREFLKNNPALTDEIERLIKAQALTNPTVIAPSVDVGDDDAIFEE
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
AITPEKEKALAATMAQIDRKFGKGSIMKMGEASSRLAIEAIPTGSIALDIALGIGGVPR
CCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEECCCCCEEEEEEECCCCCCC
GRVVEIFGPESSGKTTLAQHIIAEAQKMGGVCAFIDAEHAFDPVYAARCGVNIDDLLVSQ
CCEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEECHHCCCCHHHHHCCCCHHHHEECC
PDTGEQALEICEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKL
CCCCHHHHHHHHHHHHCCCCEEEEECHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHH
SGAISKSRTVVIFINQLRMKIGVMFGSPETTTGGQALKFYASVRLDIRRVETLKQGQEAI
HHHHHCCCEEEEEEEHHEEEEEEEECCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHH
GSRVRVKVIKNKVAPPFRQAEFDILANEGISREGNIIDIGTELGIIRKSGAWFYLGEDRL
CCCEEEEEEHHCCCCCHHHCCHHEEECCCCCCCCCEEEECCCCCEEEECCCEEEECCCCC
GQGRENVREFLKNNPALTDEIERLIKAQALTNPTVIAPSVDVGDDDAIFEE
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9595663