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The map label for this gene is ycdQ [C]

Identifier: 222524713

GI number: 222524713

Start: 1828938

End: 1829630

Strand: Reverse

Name: ycdQ [C]

Synonym: Chy400_1440

Alternate gene names: 222524713

Gene position: 1829630-1828938 (Counterclockwise)

Preceding gene: 222524719

Following gene: 222524712

Centisome position: 34.72

GC content: 47.62

Gene sequence:

>693_bases
ATGAAACGTCCATTGCTTTCAGTTATTATTCCCTGTTATAACGAAGCTGCTACCCTTCCGCTGATCCTTAATCAGGTTGA
AGCTGTTAATCTCGATAAAGAGATTATCATCGTTGATGATCACTCTACCGACGAGACACCGGCCATTCTGGAAGAGCTAC
GTCGTTCTCGTCCCCATATTACTGTCATCCGTCACCCTCACAATCGCGGCAAGGGCGCAGCAGTGCGTAGTGGTCTGGCG
CATGCCCGTGGTGAGATTACTATCGTGCAGGATGCCGATCTGGAGTATGATCCCCAGGATTATTACGAACTGGTCAAGCC
AATTGCCTCCGGTCGCGTTGATGTCGTCTTCGGCAGCCGTTTTCTTGGTCGCCATACCGGTATGTATTTCTGGAATGCGC
TGGGGAATAAGTTTTTAACCTTCCTGACCAATTTTTTGTTTAATTGCTGGATCTCCGATATGGAGACCTGCTACAAGGTG
GTACGAACCGATATTTTGCGTGATTTGCGGTTGGAAAGTGATGATTTTCGGATTGAGCCGGAGATTGCAGCGAAGGTTCT
GCGCCGAGGTTATCGCATTTATGAAGTGCCGGTGAGCTATTTGGGGCGTACTTATGAAGAGGGAAAGAAGATGAAGCCTA
TTCAAGGGTTTTACGCGATTTTTGCCCTCTTTAAGTATCGGTTTTGGTGGTAA

Upstream 100 bases:

>100_bases
CACGTATTTACCTCTTGCTGCTATAATAGCTGCTATGGCTGTCTGAGGTCTTTCCTCGGTTGTATCAAACACCGATTTCT
GTATGAACCATCATCTTCCA

Downstream 100 bases:

>100_bases
CCTCAACGACCAGTTGGGGGCAGAAATCATTTATCACCTTTTGGTGTTTCGTCGAGGAGAAAACGCTTCTGGCTTCGCTT
GCCATCGCTCTCTTCCCATA

Product: glycosyl transferase family 2 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKRPLLSVIIPCYNEAATLPLILNQVEAVNLDKEIIIVDDHSTDETPAILEELRRSRPHITVIRHPHNRGKGAAVRSGLA
HARGEITIVQDADLEYDPQDYYELVKPIASGRVDVVFGSRFLGRHTGMYFWNALGNKFLTFLTNFLFNCWISDMETCYKV
VRTDILRDLRLESDDFRIEPEIAAKVLRRGYRIYEVPVSYLGRTYEEGKKMKPIQGFYAIFALFKYRFWW

Sequences:

>Translated_230_residues
MKRPLLSVIIPCYNEAATLPLILNQVEAVNLDKEIIIVDDHSTDETPAILEELRRSRPHITVIRHPHNRGKGAAVRSGLA
HARGEITIVQDADLEYDPQDYYELVKPIASGRVDVVFGSRFLGRHTGMYFWNALGNKFLTFLTNFLFNCWISDMETCYKV
VRTDILRDLRLESDDFRIEPEIAAKVLRRGYRIYEVPVSYLGRTYEEGKKMKPIQGFYAIFALFKYRFWW
>Mature_230_residues
MKRPLLSVIIPCYNEAATLPLILNQVEAVNLDKEIIIVDDHSTDETPAILEELRRSRPHITVIRHPHNRGKGAAVRSGLA
HARGEITIVQDADLEYDPQDYYELVKPIASGRVDVVFGSRFLGRHTGMYFWNALGNKFLTFLTNFLFNCWISDMETCYKV
VRTDILRDLRLESDDFRIEPEIAAKVLRRGYRIYEVPVSYLGRTYEEGKKMKPIQGFYAIFALFKYRFWW

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=215, Percent_Identity=31.6279069767442, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI1787259, Length=118, Percent_Identity=34.7457627118644, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1788588, Length=209, Percent_Identity=27.7511961722488, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71999402, Length=235, Percent_Identity=31.9148936170213, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI25146207, Length=110, Percent_Identity=39.0909090909091, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6325029, Length=224, Percent_Identity=29.4642857142857, Blast_Score=70, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24585265, Length=214, Percent_Identity=28.5046728971963, Blast_Score=98, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 26778; Mature: 26778

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPLLSVIIPCYNEAATLPLILNQVEAVNLDKEIIIVDDHSTDETPAILEELRRSRPHI
CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCE
TVIRHPHNRGKGAAVRSGLAHARGEITIVQDADLEYDPQDYYELVKPIASGRVDVVFGSR
EEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCH
FLGRHTGMYFWNALGNKFLTFLTNFLFNCWISDMETCYKVVRTDILRDLRLESDDFRIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECH
EIAAKVLRRGYRIYEVPVSYLGRTYEEGKKMKPIQGFYAIFALFKYRFWW
HHHHHHHHCCCEEEECCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRPLLSVIIPCYNEAATLPLILNQVEAVNLDKEIIIVDDHSTDETPAILEELRRSRPHI
CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCE
TVIRHPHNRGKGAAVRSGLAHARGEITIVQDADLEYDPQDYYELVKPIASGRVDVVFGSR
EEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCH
FLGRHTGMYFWNALGNKFLTFLTNFLFNCWISDMETCYKVVRTDILRDLRLESDDFRIEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECH
EIAAKVLRRGYRIYEVPVSYLGRTYEEGKKMKPIQGFYAIFALFKYRFWW
HHHHHHHHCCCEEEECCHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]