| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524695
Identifier: 222524695
GI number: 222524695
Start: 1804932
End: 1806839
Strand: Reverse
Name: 222524695
Synonym: Chy400_1422
Alternate gene names: NA
Gene position: 1806839-1804932 (Counterclockwise)
Preceding gene: 222524696
Following gene: 222524694
Centisome position: 34.29
GC content: 58.28
Gene sequence:
>1908_bases ATGCCGAACAATCGCTACTATCAGGAATATGGCCCGATCTATCGCCGTCGAGCCGGACAACGTCCACCGCTTGCCGACGA CGAACTACCACCTGATGAGCCGCGCCGCCCCCGTGTGCGGCGGCCAGTGCGCCATCGGCGGCGGGTACCGGTCTGGTTGT GGCTGGTGGTAGGCTTAGTCCTGCTTGTCGCAATTCCCACCGGTGCGCTGTACGCCGTGGATATAGTGTATCCTGAAACG ATTTTGCCTGGCGTTTCGCTCAATGGCGAGTCAATTGGTGGTTATACGCGCACCGATTTGATTATCGAGTTGCGGCGGCG CTATCGTTCCTTCGAACAACAGCCGGTGACACTTACCTTTCGTGATCAGCAGTGGCAACCGACACTCGCTGAGTTGGGGG TCGCCTTTGATGTGGAACGGCTGGTGAATAGTGCCTTTGCGCTTGGGCGGAGCGGTGATCCGCTGACCCGGGCCTATGAG TTGTGGTTGCTCTGGCAAGAAGGAATTGATATAACGCCTCGTCTGACCGTCGATCTCGCGCAAACCCAACGCTATCTGCT GGGTCTGGCGCCACAGATCGAGCGATTGCCGGCTGATGCTGTCCTCAGTCTGGCCGATGCCCGCGTGGTTGGTCAGCCCA GTCAACCGGGTACGCAGCTTTTGGTTGACGCGACGGCAAATGATGTGCTGCTGGCTATCCGTGCGCTTCAACCACAAACG GTGCCGATCCGCACTCGTCAGATCGTGCCACAGATTGACGATACCGATCTGGTGGTTGCCCAGCAGATTGCCGACCAATT GCTGCGGAGTGCGCTTGAGTTGAAGGTCGAAGACCAGACAATCGTCTGGACGCCTGAACGTCTGGCAGAACTGCTGCGGG TAACACCGGTTGATGGTCGACTAACAATAGAAGTTGATCCAGATCGTCTTGCCCGTGCCGTGGAAGGGCTGGCGCAGATG ATTGATACCGGTACCGCCGAACCGCGCCTGCGCTTCAGTGACGGTCGGGTGCGGATCGTCGCCGAGGGACAGCCGGGGCG GCGGTTGCGTCAGGCTGACGCGGTGACTGCTATTGCCGATGTGCTGATGCAGCCTTCACCGGTAACCCGCACGCTGACTC TACCGGTTGAGCGGGTTGAACCGCAAATTACGGCAGCAACCCTCGACAATCTGGGCATTGTCGAGCTGGTGGCAGAAGGG CGGAGCAGTTTTGCCGGCTCAGCTCCATACCGCATCACCAACATTCGCGCCGGTGCAGCCCGTATGAACGGCGTATTGAT TGCGCCCGGCGAAGAATTTTCGTTTAACCGCCAGTTGGGGGAAGTCAACGCCGAAAATGGCTTTGTTGAAGGGTATGCCA TTATCGGCAACCGGACTCAGCTCGAATGGGGTGGTGGGGTGTGTCAGGTGAGCACAACCGTCTTTCGAGCCGCGTTTTGG GCCGGTCTGCCGATCACCGAACGCCATGCCCACTCGTTTTACATAAGCTGGTACGACCGTTTCGGACTCGGCCCGAACGG CGATGGTCAGGGTCTCGATGCCGCAATCTTTACCGGGGTGCAAGACCTCAAGTTCATCAACGATACCGGGCGCTGGCTGC TGATGCAAACGAGTATTGATGAGCAGGCACAGGTGCTGGTCGTCCAATTGTATGGCACCCGTCCTGAACGCGAGGTGCGG ATCGAAGGCCCAATCATCGCTAACGAGGTACGTGCACCGACTGAGCCGGTCTATATTGATGATCCTTCACTGCCGCGTGG AACAATACGGCAAACCGATGTTGCGCGCAGTGGTCGTGATATTTCCATCTACCGCATCGTGACCGAAGCAGATGGTGAGG TGCGACGCGAGCTGTTCTTCACCCGTTTCCGCCCATGGCCTAATATTTTCGTTCGTGGTAGCGGGTAG
Upstream 100 bases:
>100_bases CTGCCAGATTCACTTTCATATCCTGATCCGAAACTTGTCGCCACGCTCAAGGTTTTGTACAATGCGAGTAATCCGGTGTT ATTAAGGTTGCTGCATCCGT
Downstream 100 bases:
>100_bases GTGTGCTCGTGCAGTGATCGGTGTGTGAATGTGTTTCCGCAGGTACGATTTGTGCGTAAGCATGGAGAAAACTTCTACGT ATCGCACAGCGAGAAGGTTG
Product: VanW family protein
Products: NA
Alternate protein names: Vancomycin Resistance Protein; Vancomycin B-Type Resistance Protein VanW; VanW-Like Family Protein; VanW Like Protein; VanW-Like Protein; Vanw Family Protein; VanW Domain-Containing Protein; VanW Domain Protein; Secreted Protein; Exported Protein; G5 Domain Family; VanW Protein; Vancomycin B-Type Resistance Protein; Copper Amine Oxidase-Like; Conserved Vancomycin B-Type Resistance Domain Protein; Vancomycin Resistance Gene; LOW QUALITY PROTEIN VanW Like Protein; Vancomycin Resistance Protein-Like Protein; Lipoprotein
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MPNNRYYQEYGPIYRRRAGQRPPLADDELPPDEPRRPRVRRPVRHRRRVPVWLWLVVGLVLLVAIPTGALYAVDIVYPET ILPGVSLNGESIGGYTRTDLIIELRRRYRSFEQQPVTLTFRDQQWQPTLAELGVAFDVERLVNSAFALGRSGDPLTRAYE LWLLWQEGIDITPRLTVDLAQTQRYLLGLAPQIERLPADAVLSLADARVVGQPSQPGTQLLVDATANDVLLAIRALQPQT VPIRTRQIVPQIDDTDLVVAQQIADQLLRSALELKVEDQTIVWTPERLAELLRVTPVDGRLTIEVDPDRLARAVEGLAQM IDTGTAEPRLRFSDGRVRIVAEGQPGRRLRQADAVTAIADVLMQPSPVTRTLTLPVERVEPQITAATLDNLGIVELVAEG RSSFAGSAPYRITNIRAGAARMNGVLIAPGEEFSFNRQLGEVNAENGFVEGYAIIGNRTQLEWGGGVCQVSTTVFRAAFW AGLPITERHAHSFYISWYDRFGLGPNGDGQGLDAAIFTGVQDLKFINDTGRWLLMQTSIDEQAQVLVVQLYGTRPEREVR IEGPIIANEVRAPTEPVYIDDPSLPRGTIRQTDVARSGRDISIYRIVTEADGEVRRELFFTRFRPWPNIFVRGSG
Sequences:
>Translated_635_residues MPNNRYYQEYGPIYRRRAGQRPPLADDELPPDEPRRPRVRRPVRHRRRVPVWLWLVVGLVLLVAIPTGALYAVDIVYPET ILPGVSLNGESIGGYTRTDLIIELRRRYRSFEQQPVTLTFRDQQWQPTLAELGVAFDVERLVNSAFALGRSGDPLTRAYE LWLLWQEGIDITPRLTVDLAQTQRYLLGLAPQIERLPADAVLSLADARVVGQPSQPGTQLLVDATANDVLLAIRALQPQT VPIRTRQIVPQIDDTDLVVAQQIADQLLRSALELKVEDQTIVWTPERLAELLRVTPVDGRLTIEVDPDRLARAVEGLAQM IDTGTAEPRLRFSDGRVRIVAEGQPGRRLRQADAVTAIADVLMQPSPVTRTLTLPVERVEPQITAATLDNLGIVELVAEG RSSFAGSAPYRITNIRAGAARMNGVLIAPGEEFSFNRQLGEVNAENGFVEGYAIIGNRTQLEWGGGVCQVSTTVFRAAFW AGLPITERHAHSFYISWYDRFGLGPNGDGQGLDAAIFTGVQDLKFINDTGRWLLMQTSIDEQAQVLVVQLYGTRPEREVR IEGPIIANEVRAPTEPVYIDDPSLPRGTIRQTDVARSGRDISIYRIVTEADGEVRRELFFTRFRPWPNIFVRGSG >Mature_634_residues PNNRYYQEYGPIYRRRAGQRPPLADDELPPDEPRRPRVRRPVRHRRRVPVWLWLVVGLVLLVAIPTGALYAVDIVYPETI LPGVSLNGESIGGYTRTDLIIELRRRYRSFEQQPVTLTFRDQQWQPTLAELGVAFDVERLVNSAFALGRSGDPLTRAYEL WLLWQEGIDITPRLTVDLAQTQRYLLGLAPQIERLPADAVLSLADARVVGQPSQPGTQLLVDATANDVLLAIRALQPQTV PIRTRQIVPQIDDTDLVVAQQIADQLLRSALELKVEDQTIVWTPERLAELLRVTPVDGRLTIEVDPDRLARAVEGLAQMI DTGTAEPRLRFSDGRVRIVAEGQPGRRLRQADAVTAIADVLMQPSPVTRTLTLPVERVEPQITAATLDNLGIVELVAEGR SSFAGSAPYRITNIRAGAARMNGVLIAPGEEFSFNRQLGEVNAENGFVEGYAIIGNRTQLEWGGGVCQVSTTVFRAAFWA GLPITERHAHSFYISWYDRFGLGPNGDGQGLDAAIFTGVQDLKFINDTGRWLLMQTSIDEQAQVLVVQLYGTRPEREVRI EGPIIANEVRAPTEPVYIDDPSLPRGTIRQTDVARSGRDISIYRIVTEADGEVRRELFFTRFRPWPNIFVRGSG
Specific function: Unknown
COG id: COG2720
COG function: function code V; Uncharacterized vancomycin resistance protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70942; Mature: 70811
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNRYYQEYGPIYRRRAGQRPPLADDELPPDEPRRPRVRRPVRHRRRVPVWLWLVVGLV CCCCCCHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCHHHHHHHHHH LLVAIPTGALYAVDIVYPETILPGVSLNGESIGGYTRTDLIIELRRRYRSFEQQPVTLTF HHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE RDQQWQPTLAELGVAFDVERLVNSAFALGRSGDPLTRAYELWLLWQEGIDITPRLTVDLA CCCCCCCHHHHCCCCEEHHHHHHHHHHCCCCCCCHHEEEEEEEEEECCCCCCCEEEEEHH QTQRYLLGLAPQIERLPADAVLSLADARVVGQPSQPGTQLLVDATANDVLLAIRALQPQT HHHHHHHCCCCHHHHCCHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEEEEECCCCCC VPIRTRQIVPQIDDTDLVVAQQIADQLLRSALELKVEDQTIVWTPERLAELLRVTPVDGR CCEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEEECCCEEEECHHHHHHHHHCCCCCCE LTIEVDPDRLARAVEGLAQMIDTGTAEPRLRFSDGRVRIVAEGQPGRRLRQADAVTAIAD EEEEECHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHH VLMQPSPVTRTLTLPVERVEPQITAATLDNLGIVELVAEGRSSFAGSAPYRITNIRAGAA HHCCCCCCCEEEECCHHHCCCEEEEEHHCCCCHHHHHHHCHHCCCCCCCEEEEEEECCHH RMNGVLIAPGEEFSFNRQLGEVNAENGFVEGYAIIGNRTQLEWGGGVCQVSTTVFRAAFW HHCCEEEECCCCCCCCCHHCCCCCCCCEEEEEEEECCCEEEECCCCEEEHHHHHHHHHHH AGLPITERHAHSFYISWYDRFGLGPNGDGQGLDAAIFTGVQDLKFINDTGRWLLMQTSID CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCHHHHEEECCCCCEEEEECCCC EQAQVLVVQLYGTRPEREVRIEGPIIANEVRAPTEPVYIDDPSLPRGTIRQTDVARSGRD CCCEEEEEEEECCCCCCEEEEECCEEECCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCC ISIYRIVTEADGEVRRELFFTRFRPWPNIFVRGSG EEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCC >Mature Secondary Structure PNNRYYQEYGPIYRRRAGQRPPLADDELPPDEPRRPRVRRPVRHRRRVPVWLWLVVGLV CCCCCHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCHHHHHHHHHH LLVAIPTGALYAVDIVYPETILPGVSLNGESIGGYTRTDLIIELRRRYRSFEQQPVTLTF HHHHCCCCCEEEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE RDQQWQPTLAELGVAFDVERLVNSAFALGRSGDPLTRAYELWLLWQEGIDITPRLTVDLA CCCCCCCHHHHCCCCEEHHHHHHHHHHCCCCCCCHHEEEEEEEEEECCCCCCCEEEEEHH QTQRYLLGLAPQIERLPADAVLSLADARVVGQPSQPGTQLLVDATANDVLLAIRALQPQT HHHHHHHCCCCHHHHCCHHHHHHHHHHHEECCCCCCCCEEEEECCCCCEEEEEECCCCCC VPIRTRQIVPQIDDTDLVVAQQIADQLLRSALELKVEDQTIVWTPERLAELLRVTPVDGR CCEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEEECCCEEEECHHHHHHHHHCCCCCCE LTIEVDPDRLARAVEGLAQMIDTGTAEPRLRFSDGRVRIVAEGQPGRRLRQADAVTAIAD EEEEECHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHH VLMQPSPVTRTLTLPVERVEPQITAATLDNLGIVELVAEGRSSFAGSAPYRITNIRAGAA HHCCCCCCCEEEECCHHHCCCEEEEEHHCCCCHHHHHHHCHHCCCCCCCEEEEEEECCHH RMNGVLIAPGEEFSFNRQLGEVNAENGFVEGYAIIGNRTQLEWGGGVCQVSTTVFRAAFW HHCCEEEECCCCCCCCCHHCCCCCCCCEEEEEEEECCCEEEECCCCEEEHHHHHHHHHHH AGLPITERHAHSFYISWYDRFGLGPNGDGQGLDAAIFTGVQDLKFINDTGRWLLMQTSID CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHCCHHHHEEECCCCCEEEEECCCC EQAQVLVVQLYGTRPEREVRIEGPIIANEVRAPTEPVYIDDPSLPRGTIRQTDVARSGRD CCCEEEEEEEECCCCCCEEEEECCEEECCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCC ISIYRIVTEADGEVRRELFFTRFRPWPNIFVRGSG EEEEEEEECCCCHHHHHHHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA