| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pleC [H]
Identifier: 222524660
GI number: 222524660
Start: 1766774
End: 1768213
Strand: Reverse
Name: pleC [H]
Synonym: Chy400_1387
Alternate gene names: 222524660
Gene position: 1768213-1766774 (Counterclockwise)
Preceding gene: 222524661
Following gene: 222524659
Centisome position: 33.56
GC content: 56.53
Gene sequence:
>1440_bases ATGGTTGCGCGTACTCTCAACCCCGCTCGCACTCCGGTCGCAACACCCGATGAAGGGTTGGTCACCGACCTGTTACCACC GATGCTCATCCTGCTGGCTACGCTGGCGGGAGCGGCGACCGGTATTTTGCTCCTCAATCGCTGGAGTGGCAATTTCTGGC CCTACCTGATTATCGGCTTACTGCTCGTCTGTCTCGCGGTGAGTGATCGGCTGCGGCGGCGAGGCGATTTACGCATGGCC AGTATCGTTGTCGTTGCCGCGATAACATTATTGCCCGTGCTGAGTTGTGCTGCCTTTGGGTTTACAAACAATATCTTTAT CTACCTCTCGGTACTGGGGGTTTTTGCTGCCGGGATCATAGTCTCGTCGCGCGCACCGTTTCGTGCCGGGCAGGCCGCGA TTCTGCTGTACCTGCTTCTCTTGCTGGGTGCCGACCTGATCGGGCAGCCACGACCGACCTGGTTCGAGGTGATCGGTCAT CTGTTGCTGCTGATCGCCTTGTTGTTCGGCGCAGCGACGCTCAGTTGGGCGGCAGCCTATGTGGTGCGCGGGACGATCAG TTGGGCGATTGATACGGCTCAAAAATCCGAGCGGCGTGAGCAGTTGCTGCGAGAGACGCAGGCGACGCTGGAGCGGGCAC TGCTTGAGCGTGATCTCTTGAATGAGCAGCTCTACCGTACCACGCTTGAGCTTGAAGAAGCGCGTGCTGCTGCCGAAGCG GCGTATCGCTCGAAATCCAATTTTATGGCCACAATGTCGCACGAATTGCGTACTCCGCTCAACATTATTATCGGTTTCAG CACGGCGATGCTGGAACATCCTGAAATGTACGGTGATGTTCGGATTGATGAGCAGGTACTGCAAGACATCGCCGAAATCC GGCGGAGTGGTCAGCATCTGTTAGGGCTGATCAACGACATCCTCGATCTGGCGAAGGTTGAGGCCGGGAAACTTGAGCTG AACAAGACAAATCTGGCACTAGGCCCACTCCTTGAAGAAACGCTTCGTACTGCGCAGGCACTGATCAACGACCGCCCTAT CCAGTTGCGCCGCGAGTATCGCGAACCATTGCCGACGGTGTTTGCCGATGAGGTGCGGGTACGGCAGGTCTTGCTGAACC TGGTTTCAAATGCCTGTAAGTTTACGCATGCAGGTGAGATTGCCGTTGGTGCTCGTGTCGATACCAATGAGATTGTGCTT TGGGTGCGTGATACCGGTATCGGCATCGCACCGGCAGATCAAGAGCGTATCTTCCAGCAATTTGAGCAGATCGAAAATGC CGACACTCGCCAGCATGCCGGTACCGGGCTTGGTCTCTCGATCTGCCGCTGGTTAGTTGAACTGCACGGTGGTCGGATGT GGGTAGAGAGTGAATTGGGTAAAGGCAGCATCTTCTTCTTCTCGCTACCGCGGACACGGGCCGGTAGTGAACCGGCGTAA
Upstream 100 bases:
>100_bases TCCGGCCTCTTTCATCATTTTTCAATCTTTATGACAGGTACACAACAGCTACAATACGAACAGGCAATCCATTCATAACG CTCGCGAAGGATAAAGGCCA
Downstream 100 bases:
>100_bases GGCGAGAGGTTGATTGACCGGCAATGTCGTTGGTTATCTATCACCGGTGATGGTTGGGTTAGCAAAGGAGCAAGAACGAT GGCCCGAATTCTCCTTGTCG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 479; Mature: 479
Protein sequence:
>479_residues MVARTLNPARTPVATPDEGLVTDLLPPMLILLATLAGAATGILLLNRWSGNFWPYLIIGLLLVCLAVSDRLRRRGDLRMA SIVVVAAITLLPVLSCAAFGFTNNIFIYLSVLGVFAAGIIVSSRAPFRAGQAAILLYLLLLLGADLIGQPRPTWFEVIGH LLLLIALLFGAATLSWAAAYVVRGTISWAIDTAQKSERREQLLRETQATLERALLERDLLNEQLYRTTLELEEARAAAEA AYRSKSNFMATMSHELRTPLNIIIGFSTAMLEHPEMYGDVRIDEQVLQDIAEIRRSGQHLLGLINDILDLAKVEAGKLEL NKTNLALGPLLEETLRTAQALINDRPIQLRREYREPLPTVFADEVRVRQVLLNLVSNACKFTHAGEIAVGARVDTNEIVL WVRDTGIGIAPADQERIFQQFEQIENADTRQHAGTGLGLSICRWLVELHGGRMWVESELGKGSIFFFSLPRTRAGSEPA
Sequences:
>Translated_479_residues MVARTLNPARTPVATPDEGLVTDLLPPMLILLATLAGAATGILLLNRWSGNFWPYLIIGLLLVCLAVSDRLRRRGDLRMA SIVVVAAITLLPVLSCAAFGFTNNIFIYLSVLGVFAAGIIVSSRAPFRAGQAAILLYLLLLLGADLIGQPRPTWFEVIGH LLLLIALLFGAATLSWAAAYVVRGTISWAIDTAQKSERREQLLRETQATLERALLERDLLNEQLYRTTLELEEARAAAEA AYRSKSNFMATMSHELRTPLNIIIGFSTAMLEHPEMYGDVRIDEQVLQDIAEIRRSGQHLLGLINDILDLAKVEAGKLEL NKTNLALGPLLEETLRTAQALINDRPIQLRREYREPLPTVFADEVRVRQVLLNLVSNACKFTHAGEIAVGARVDTNEIVL WVRDTGIGIAPADQERIFQQFEQIENADTRQHAGTGLGLSICRWLVELHGGRMWVESELGKGSIFFFSLPRTRAGSEPA >Mature_479_residues MVARTLNPARTPVATPDEGLVTDLLPPMLILLATLAGAATGILLLNRWSGNFWPYLIIGLLLVCLAVSDRLRRRGDLRMA SIVVVAAITLLPVLSCAAFGFTNNIFIYLSVLGVFAAGIIVSSRAPFRAGQAAILLYLLLLLGADLIGQPRPTWFEVIGH LLLLIALLFGAATLSWAAAYVVRGTISWAIDTAQKSERREQLLRETQATLERALLERDLLNEQLYRTTLELEEARAAAEA AYRSKSNFMATMSHELRTPLNIIIGFSTAMLEHPEMYGDVRIDEQVLQDIAEIRRSGQHLLGLINDILDLAKVEAGKLEL NKTNLALGPLLEETLRTAQALINDRPIQLRREYREPLPTVFADEVRVRQVLLNLVSNACKFTHAGEIAVGARVDTNEIVL WVRDTGIGIAPADQERIFQQFEQIENADTRQHAGTGLGLSICRWLVELHGGRMWVESELGKGSIFFFSLPRTRAGSEPA
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=292, Percent_Identity=36.986301369863, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI87081816, Length=264, Percent_Identity=36.7424242424242, Blast_Score=146, Evalue=4e-36, Organism=Escherichia coli, GI145693157, Length=247, Percent_Identity=36.8421052631579, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI48994928, Length=249, Percent_Identity=35.3413654618474, Blast_Score=131, Evalue=9e-32, Organism=Escherichia coli, GI1788713, Length=260, Percent_Identity=34.6153846153846, Blast_Score=125, Evalue=7e-30, Organism=Escherichia coli, GI1786600, Length=228, Percent_Identity=34.2105263157895, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1786912, Length=297, Percent_Identity=29.96632996633, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=27.2340425531915, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=32.1888412017167, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786783, Length=233, Percent_Identity=27.8969957081545, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790346, Length=223, Percent_Identity=30.0448430493274, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1788279, Length=227, Percent_Identity=26.431718061674, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1787894, Length=228, Percent_Identity=28.5087719298246, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788549, Length=232, Percent_Identity=26.2931034482759, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789808, Length=240, Percent_Identity=27.5, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI87082128, Length=234, Percent_Identity=26.4957264957265, Blast_Score=62, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=73, Percent_Identity=50.6849315068493, Blast_Score=77, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52896; Mature: 52896
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARTLNPARTPVATPDEGLVTDLLPPMLILLATLAGAATGILLLNRWSGNFWPYLIIGL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH LLVCLAVSDRLRRRGDLRMASIVVVAAITLLPVLSCAAFGFTNNIFIYLSVLGVFAAGII HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VSSRAPFRAGQAAILLYLLLLLGADLIGQPRPTWFEVIGHLLLLIALLFGAATLSWAAAY HCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGTISWAIDTAQKSERREQLLRETQATLERALLERDLLNEQLYRTTLELEEARAAAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYRSKSNFMATMSHELRTPLNIIIGFSTAMLEHPEMYGDVRIDEQVLQDIAEIRRSGQHL HHHHHCCHHHHHHHHHCCCHHHEEEHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH LGLINDILDLAKVEAGKLELNKTNLALGPLLEETLRTAQALINDRPIQLRREYREPLPTV HHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH FADEVRVRQVLLNLVSNACKFTHAGEIAVGARVDTNEIVLWVRDTGIGIAPADQERIFQQ HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEECCCCEEEEEECCCCCCCCCCHHHHHHH FEQIENADTRQHAGTGLGLSICRWLVELHGGRMWVESELGKGSIFFFSLPRTRAGSEPA HHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MVARTLNPARTPVATPDEGLVTDLLPPMLILLATLAGAATGILLLNRWSGNFWPYLIIGL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHH LLVCLAVSDRLRRRGDLRMASIVVVAAITLLPVLSCAAFGFTNNIFIYLSVLGVFAAGII HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH VSSRAPFRAGQAAILLYLLLLLGADLIGQPRPTWFEVIGHLLLLIALLFGAATLSWAAAY HCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVRGTISWAIDTAQKSERREQLLRETQATLERALLERDLLNEQLYRTTLELEEARAAAEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYRSKSNFMATMSHELRTPLNIIIGFSTAMLEHPEMYGDVRIDEQVLQDIAEIRRSGQHL HHHHHCCHHHHHHHHHCCCHHHEEEHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH LGLINDILDLAKVEAGKLELNKTNLALGPLLEETLRTAQALINDRPIQLRREYREPLPTV HHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHH FADEVRVRQVLLNLVSNACKFTHAGEIAVGARVDTNEIVLWVRDTGIGIAPADQERIFQQ HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEECCCCEEEEEECCCCCCCCCCHHHHHHH FEQIENADTRQHAGTGLGLSICRWLVELHGGRMWVESELGKGSIFFFSLPRTRAGSEPA HHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]