| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524544
Identifier: 222524544
GI number: 222524544
Start: 1614872
End: 1615663
Strand: Reverse
Name: 222524544
Synonym: Chy400_1268
Alternate gene names: NA
Gene position: 1615663-1614872 (Counterclockwise)
Preceding gene: 222524552
Following gene: 222524543
Centisome position: 30.66
GC content: 46.84
Gene sequence:
>792_bases GTGGATAACCCAGTCAATGATGATCAACCAGTATATGCAGGATGTACTGAAGCTCTACTAAGACAATATCTTCATCCGCA AGATAGCTGGTATGTCATGACCCGGTACTCAACGAGGAGCGGTATTGTTGGGAGTTGTGGATGGGTTAACAGCCTAACTC CTGACTTTTCATCTCCCCTTACATGGTCAAGTCCTGAGAGTGGTATTAAGTTACACGCACTTAGCGCTCTGAGCCTGCGA CACCATCGGCTAGGTAAGCAAGTTCTTCCAACACCGTTATATCGAAAGTATCCCCTATCATCTGATGTAAGGCGCCGAAG TAGACTTTGTTGCCTGTTGGTATCCTCAGACAACAGTAGCCAGACAGTAAACATTGCCTCTGCCAAACGCCTGCATGTTA CCTTCCGCTTGCATCTGGGCAGTCTAACGTGCCGAACCATCCATGGCGCTCGATCCCTGCCCAAACTGCCTTTAGGCATG TACCCTGGTCGGTGCTGTGGACAATTTCTGCATTCCTTACAACACGCTGACCAGTATTCGAGACTATCCCTGTACGTTAG ATACAGTCACAGAGTTGATCAAATCTGGACGATTGCCAAATTGCCTCGTTACTACATGTTATTTCCGCACCGGCAGTCGC ACAGAAGCCAAGAACTGTGTTCCAAAGTATTGGCCTATCAAGTACTGAGCAAGATGATCAGCATTTTGTGGGTATTTACC AACAAACAACACAACAAGCATACAGTGCTGATGTACTCGCAATTCGTTTCTACCAAATGGAGATACAGATGA
Upstream 100 bases:
>100_bases TTATCGTGAGCAGCTTCATTCCATCTGCTCCTGGAAACTCAACTGAGCTGGTGTACATGCATGCCAGAGAAGCGTAGATT CGTATCCAAAGGGGGATACT
Downstream 100 bases:
>100_bases CACTAGAAGAAATTGCGCGCCTTGCCGGTTGTTCACGCTCGACAGTCTCTCGGGTGATTAACCACGATCCACATGTGAGT CCAGAAATGCGAGAGCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MDNPVNDDQPVYAGCTEALLRQYLHPQDSWYVMTRYSTRSGIVGSCGWVNSLTPDFSSPLTWSSPESGIKLHALSALSLR HHRLGKQVLPTPLYRKYPLSSDVRRRSRLCCLLVSSDNSSQTVNIASAKRLHVTFRLHLGSLTCRTIHGARSLPKLPLGM YPGRCCGQFLHSLQHADQYSRLSLYVRYSHRVDQIWTIAKLPRYYMLFPHRQSHRSQELCSKVLAYQVLSKMISILWVFT NKQHNKHTVLMYSQFVSTKWRYR
Sequences:
>Translated_263_residues MDNPVNDDQPVYAGCTEALLRQYLHPQDSWYVMTRYSTRSGIVGSCGWVNSLTPDFSSPLTWSSPESGIKLHALSALSLR HHRLGKQVLPTPLYRKYPLSSDVRRRSRLCCLLVSSDNSSQTVNIASAKRLHVTFRLHLGSLTCRTIHGARSLPKLPLGM YPGRCCGQFLHSLQHADQYSRLSLYVRYSHRVDQIWTIAKLPRYYMLFPHRQSHRSQELCSKVLAYQVLSKMISILWVFT NKQHNKHTVLMYSQFVSTKWRYR >Mature_263_residues MDNPVNDDQPVYAGCTEALLRQYLHPQDSWYVMTRYSTRSGIVGSCGWVNSLTPDFSSPLTWSSPESGIKLHALSALSLR HHRLGKQVLPTPLYRKYPLSSDVRRRSRLCCLLVSSDNSSQTVNIASAKRLHVTFRLHLGSLTCRTIHGARSLPKLPLGM YPGRCCGQFLHSLQHADQYSRLSLYVRYSHRVDQIWTIAKLPRYYMLFPHRQSHRSQELCSKVLAYQVLSKMISILWVFT NKQHNKHTVLMYSQFVSTKWRYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30442; Mature: 30442
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNPVNDDQPVYAGCTEALLRQYLHPQDSWYVMTRYSTRSGIVGSCGWVNSLTPDFSSPL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCC TWSSPESGIKLHALSALSLRHHRLGKQVLPTPLYRKYPLSSDVRRRSRLCCLLVSSDNSS CCCCCCCCEEEEEHHHHHHHHHHHCHHHCCCCCHHCCCCCHHHHHHCCEEEEEEECCCCC QTVNIASAKRLHVTFRLHLGSLTCRTIHGARSLPKLPLGMYPGRCCGQFLHSLQHADQYS CEEEECCCEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC RLSLYVRYSHRVDQIWTIAKLPRYYMLFPHRQSHRSQELCSKVLAYQVLSKMISILWVFT EEEEEEEECCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHEE NKQHNKHTVLMYSQFVSTKWRYR CCCCCCEEEEEEEHHHCCCCCCC >Mature Secondary Structure MDNPVNDDQPVYAGCTEALLRQYLHPQDSWYVMTRYSTRSGIVGSCGWVNSLTPDFSSPL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCCC TWSSPESGIKLHALSALSLRHHRLGKQVLPTPLYRKYPLSSDVRRRSRLCCLLVSSDNSS CCCCCCCCEEEEEHHHHHHHHHHHCHHHCCCCCHHCCCCCHHHHHHCCEEEEEEECCCCC QTVNIASAKRLHVTFRLHLGSLTCRTIHGARSLPKLPLGMYPGRCCGQFLHSLQHADQYS CEEEECCCEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC RLSLYVRYSHRVDQIWTIAKLPRYYMLFPHRQSHRSQELCSKVLAYQVLSKMISILWVFT EEEEEEEECCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEHEE NKQHNKHTVLMYSQFVSTKWRYR CCCCCCEEEEEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA