| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is gpmI
Identifier: 222524528
GI number: 222524528
Start: 1595803
End: 1597425
Strand: Reverse
Name: gpmI
Synonym: Chy400_1252
Alternate gene names: 222524528
Gene position: 1597425-1595803 (Counterclockwise)
Preceding gene: 222524529
Following gene: 222524527
Centisome position: 30.32
GC content: 58.41
Gene sequence:
>1623_bases ATGACACGTCCACGTCCGGTGGTCTTGATAATTATGGATGGCTGGGGTATTGCGCCGCCAGGGCCGGGTAATGCGGCTGA TTTGGCCGATACGCCCCATGTTGATGCGTGGATGGCGAATTGCCCCTTTACAACATTGGGAGCTTCAGGGCTTGATGTTG GCCTGCCTGAAGGTCAGATTGGGAACTCCGAGGTAGGCCATCTCAATATTGGGGCCGGTTTTGTGGTCTATCAAGAACTG ACGCGCATCAGCAAAGCGATTGCCGATGGTGATTTTTTTACCAACCCGGTCTTGCTCCAGGCTATCGAACACGTCAAACA GCGCAACTCGGCCTTACATTTGATGGGGTTGTTTGGGCCTGGAGGCGTCCATGCCCATGAAGATCACCTGCACGCGCTGC TGGAACTGGCCCACCGCCATCATCTCCAGCGCGTCTATCTCCACCTCTTCCTCGACGGGCGCGATGTGTTGCCGCGCAGT GCCCTGGGTTTTCTCGACACCCTCGAAGGGGTGATCGCCCGGCTTGGCGTCGGCACGATTGCTACCGTTTCCGGTCGTTA CTATGCGATGGATCGTGATAAGCGCTGGGAACGCACGGGACGGGCGTATGCGGCCCTGGTTGATGGGGTGGGTGAGAAGG CACCTTCAGCGCGGGCAGCGATTGAGGCATCGTATGCCCGTGATGTCAGTGATGAATTTGTCTTACCCACAGTGATTGTC ACCGCCAGCGGCGAACCAACCGCTACCGTGCGCGATGGCGATGCCGTGATCTTTACCAACTTCCGCCCCGACCGCGGTCG GCAGTTGACCCGCGCTTTTGTTGATCCAGACCTCAACGAACGTATTCGTCAGCACTATGAACGGCAAAAGGCTGAAGGCC AGCCGTTGCCTGCCACGATCTGGCAGCGTGAGCGTCAGTTGCGCGATCTCTGTTTCGTGACCATGACCCAATACGAAGAG GGCTTGCCGGTACTGGTTGCCTTCCCGCCCCGTTACGTCACCAATCCGCTGGCCGCTGTGATCAGTCAGGCCGGGCTGCG CCAGTTTCATATTGCCGAGACCGAGAAATACCCGCACGTCACCTTCTTCCTCAATGGTGGGCGCGAAGAGCCGTTTCCTG GCGAAGATCGTCAGCTCATTCCATCACCCAAAGTCGCCACTTACGATCTGAAACCGGAAATGAGTGCCCCGGAAGTCACC GAGGCTCTGCTGGCCGCAATTGATAGCGATCAATACGATTTCATCGTGGTCAATTACGCCAACCCTGATATGGTTGGTCA CACCGGGAGTATCCCGGCGGTGATCAAAGCCTGTGAAGCCGTTGATGCCGGGTTGGCGCGGGTGGTGCCGGCCATTCTGG AGCGGGGCGGCGTGGCCCTCGTCATCGCCGATCACGGGAACGCCGAGCAGATGATTGACCCGGAAACTGGGGGGCCGCAC ACGGCACACACCACCAATCCGGCACCTTGTTTCCTGATCGGTGGTGCCGGTTATGGCAAAGATGCTATCGAACTGCGGCA CGGTGGACGATTGGCCGACGTGGCACCAACACTGCTCGAACTGTTGGAGTTAGAACCGTCACCCGATATGACCGGGCAGA GCCTGATTGTGCGTCGTGCTTAG
Upstream 100 bases:
>100_bases GCTGACCGTTGTTCCTCTACTCGGAGCCGCGCTGCTTGGGCTACTGGCAGCGTGGCGCATCGTTCAGGTAGCTCTTGGTT TGGGATAAGGAGAACGTCCA
Downstream 100 bases:
>100_bases TCAATCTGGACAGGTTGAACCCTGCCGCACAAGTAGCCTGTCAGGTGCTGTTTCAGCAAAGGGATGTCTCTGAACAACAC CCCTCGTTGTACAAGCGGTG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MTRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCPFTTLGASGLDVGLPEGQIGNSEVGHLNIGAGFVVYQEL TRISKAIADGDFFTNPVLLQAIEHVKQRNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRS ALGFLDTLEGVIARLGVGTIATVSGRYYAMDRDKRWERTGRAYAALVDGVGEKAPSARAAIEASYARDVSDEFVLPTVIV TASGEPTATVRDGDAVIFTNFRPDRGRQLTRAFVDPDLNERIRQHYERQKAEGQPLPATIWQRERQLRDLCFVTMTQYEE GLPVLVAFPPRYVTNPLAAVISQAGLRQFHIAETEKYPHVTFFLNGGREEPFPGEDRQLIPSPKVATYDLKPEMSAPEVT EALLAAIDSDQYDFIVVNYANPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH TAHTTNPAPCFLIGGAGYGKDAIELRHGGRLADVAPTLLELLELEPSPDMTGQSLIVRRA
Sequences:
>Translated_540_residues MTRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCPFTTLGASGLDVGLPEGQIGNSEVGHLNIGAGFVVYQEL TRISKAIADGDFFTNPVLLQAIEHVKQRNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRS ALGFLDTLEGVIARLGVGTIATVSGRYYAMDRDKRWERTGRAYAALVDGVGEKAPSARAAIEASYARDVSDEFVLPTVIV TASGEPTATVRDGDAVIFTNFRPDRGRQLTRAFVDPDLNERIRQHYERQKAEGQPLPATIWQRERQLRDLCFVTMTQYEE GLPVLVAFPPRYVTNPLAAVISQAGLRQFHIAETEKYPHVTFFLNGGREEPFPGEDRQLIPSPKVATYDLKPEMSAPEVT EALLAAIDSDQYDFIVVNYANPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH TAHTTNPAPCFLIGGAGYGKDAIELRHGGRLADVAPTLLELLELEPSPDMTGQSLIVRRA >Mature_539_residues TRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCPFTTLGASGLDVGLPEGQIGNSEVGHLNIGAGFVVYQELT RISKAIADGDFFTNPVLLQAIEHVKQRNSALHLMGLFGPGGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSA LGFLDTLEGVIARLGVGTIATVSGRYYAMDRDKRWERTGRAYAALVDGVGEKAPSARAAIEASYARDVSDEFVLPTVIVT ASGEPTATVRDGDAVIFTNFRPDRGRQLTRAFVDPDLNERIRQHYERQKAEGQPLPATIWQRERQLRDLCFVTMTQYEEG LPVLVAFPPRYVTNPLAAVISQAGLRQFHIAETEKYPHVTFFLNGGREEPFPGEDRQLIPSPKVATYDLKPEMSAPEVTE ALLAAIDSDQYDFIVVNYANPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPHT AHTTNPAPCFLIGGAGYGKDAIELRHGGRLADVAPTLLELLELEPSPDMTGQSLIVRRA
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family
Homologues:
Organism=Escherichia coli, GI1790041, Length=538, Percent_Identity=48.1412639405204, Blast_Score=499, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17507741, Length=538, Percent_Identity=42.9368029739777, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI32564249, Length=538, Percent_Identity=42.9368029739777, Blast_Score=402, Evalue=1e-112,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GPMI_CHLAA (A9WJ95)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001634761.1 - ProteinModelPortal: A9WJ95 - SMR: A9WJ95 - GeneID: 5825944 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1142 - HOGENOM: HBG613255 - OMA: DNKTDEF - ProtClustDB: PRK05434 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_01038 - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 - Gene3D: G3DSA:3.40.720.10 - Gene3D: G3DSA:3.40.1450.10 - PIRSF: PIRSF001492 - TIGRFAMs: TIGR01307
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core; SSF64158 BPG-indep_PGM_N
EC number: =5.4.2.1
Molecular weight: Translated: 58598; Mature: 58467
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: ACT_SITE 63-63
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCPFTTLGASGLDVGLPEGQI CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCCCCCCCCCC GNSEVGHLNIGAGFVVYQELTRISKAIADGDFFTNPVLLQAIEHVKQRNSALHLMGLFGP CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC GGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSALGFLDTLEGVIARLGVGTI CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEE ATVSGRYYAMDRDKRWERTGRAYAALVDGVGEKAPSARAAIEASYARDVSDEFVLPTVIV EEECCEEEEECCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE TASGEPTATVRDGDAVIFTNFRPDRGRQLTRAFVDPDLNERIRQHYERQKAEGQPLPATI EECCCCCEEEECCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH WQRERQLRDLCFVTMTQYEEGLPVLVAFPPRYVTNPLAAVISQAGLRQFHIAETEKYPHV HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEE TFFLNGGREEPFPGEDRQLIPSPKVATYDLKPEMSAPEVTEALLAAIDSDQYDFIVVNYA EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECC NPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC TAHTTNPAPCFLIGGAGYGKDAIELRHGGRLADVAPTLLELLELEPSPDMTGQSLIVRRA CCCCCCCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECC >Mature Secondary Structure TRPRPVVLIIMDGWGIAPPGPGNAADLADTPHVDAWMANCPFTTLGASGLDVGLPEGQI CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHCCCCCCCCCCCCCCC GNSEVGHLNIGAGFVVYQELTRISKAIADGDFFTNPVLLQAIEHVKQRNSALHLMGLFGP CCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC GGVHAHEDHLHALLELAHRHHLQRVYLHLFLDGRDVLPRSALGFLDTLEGVIARLGVGTI CCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEE ATVSGRYYAMDRDKRWERTGRAYAALVDGVGEKAPSARAAIEASYARDVSDEFVLPTVIV EEECCEEEEECCCHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEE TASGEPTATVRDGDAVIFTNFRPDRGRQLTRAFVDPDLNERIRQHYERQKAEGQPLPATI EECCCCCEEEECCCEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHH WQRERQLRDLCFVTMTQYEEGLPVLVAFPPRYVTNPLAAVISQAGLRQFHIAETEKYPHV HHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCEE TFFLNGGREEPFPGEDRQLIPSPKVATYDLKPEMSAPEVTEALLAAIDSDQYDFIVVNYA EEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECC NPDMVGHTGSIPAVIKACEAVDAGLARVVPAILERGGVALVIADHGNAEQMIDPETGGPH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC TAHTTNPAPCFLIGGAGYGKDAIELRHGGRLADVAPTLLELLELEPSPDMTGQSLIVRRA CCCCCCCCCEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA