| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524527
Identifier: 222524527
GI number: 222524527
Start: 1592278
End: 1594371
Strand: Reverse
Name: 222524527
Synonym: Chy400_1251
Alternate gene names: NA
Gene position: 1594371-1592278 (Counterclockwise)
Preceding gene: 222524528
Following gene: 222524525
Centisome position: 30.26
GC content: 55.54
Gene sequence:
>2094_bases ATGGCAGACCAAAAGCAATCACGGCGACTGAGTTTCGAGATTCCCCTCGATGCAAGCAGCGTTGATGATTTCTCTCCTGA GACGCCGGTCAAAGTCGTGGTTGAGGGTGCCGGTAACATTTTGCACTCTTCACTGGCTCGTTTTGATAAAACGGGCAGAG CGGTAGTCCGCGTTGAACTGAGTGGTGCTCCTGATACCCTGAACATCATCGTTGGTCCAGCCGATGCTGAGGACGAGGAT TTGCCTCGTCTCCAAAGCATTAGTCGCACTATATCAGCACGGACGTTGCAGGAGCGCCAGTTTAAGCTGGAACCGATCTC GATCTCAACTTACTACTGGCATTGGTGGCGACGCTGGTGTCGCTATTTTGTGATCACCGGTCGGGTTGTCTGTCCTGATG GAAAGCCGGTCCCTGGGGCACGGGTGTGTGCCTTCGATATCGACCACTGGTGGTGGTGGTCCAGTCGCCAACAGGTGGGG TGTGATACGACCGATGCCAATGGTGCGTTCACCATCAAGTTTCGCTGGTGTTGTGGCTGGTGGCCATGGTGGTGGTGGCG AATTCGCTACTGGCAGCTTGAACCCTGGCTCGTCGATCTGTTACGCCCGATTGTCGAGCAGGTACCTGATTTTCCCATTC CTATCCCCGATCCGCGGCCCTCACCCGCTGTCTTTGCGCCATTGCTGGAACGCGATGGTCAGGCAATGGCCCTGGTGAGC CAACCATTCGATACAGCCGTGTTGCCAGCACTGCGTGAGAAGCTACGCACACGTCTGCCACATATCCCCGAACTTGAACA ATTGCGCATCTGGCCCTGGGCACCCTGGCAACCATGGTGGGATTGTACACCGGATATTATCTTTCAAGTCACCCAGCAAT GCGAAGGTCGACTCAAAGTCATCGTTGACGAGACTATCGCCGATACGCGCTGGAATATTCCCACGAATATGAGTGTGACG CTGGTCGCTAACGAGGCAGCGTGTTGCATTGACAATCCACCGCCACCTGAAGGCAACTGCGTTGTGGTAGCGAATGTGTG CAGTAGCCTGAGCAACAATATCGGCGGGAATATGGGCGCTATTCCAGCACCGGCTGGTTATCTAAATCCGAATGTCGCAG CCCTGTACGGTGATCGCCCCTTTGCCGGTACGGTATCAATTGGCGGACAGTTTGGCAGTGCAGCGATGGTTGATTTCTAC GAATTTGAATGGGCGACCAGTCCAGGTGGGCCGTGGCAACCCATGCCACCCGCGGCAGTTGGGAATTTTACGCGCACCTT CTGGGGGCCGGCACTGCCTGCGGGGCCGGTTGACTTCCATACGGTCCCGATCAATTTCACCCCGATCAGCGGACGACTGG TTGCTCCTTCACGGACATTCTTCGAGGCAAACAATGCTCCGGGGAGCTGGGGGCTGAGCCGTTTCTGGGTGAGTAATCCC AATCTGCTACTCCAGTGGCTGACTACCAATACCTTTACCGATGGTACGTACTATTTGCGTCTGGTCGGTTATCAAAACAC CGGGACAGGAGCGAATCCGCAATTGGGTCATCCCCAAATCCTGCCGATCTGCAATACCGATCACCCGAACTACCTGGTGC TTACCATTGACAACAGTACCAGCAATCTTGAGCCGGCAGCCGATATTGTCGCAGTACGCATCAATGGTAGTCTGGCCGAT CCCTGTGCCAATATCATTGCCGACAGCGGCGGCACGCTTGAGATTGATTTTATCGCCTACGATGTCGGTCAGCATCTGGC GTTCTACACCCTCGAAGCAACCTACGGCAAGAACGGTCGTGTCAATCTGCTGACGTGTCCGGGGGCCACACTAACGCCTA TTTCTCTACCGCCAACTGCTCCCGCCGCTGATCAGGTTGGTCCCGATTACGGAGCAGCACGTAGTCAGGGGGCAACGGCA CCACACTGGCGTGGTGGGGGATTACGCTTAACCATTCCTGACCTGCGCTGCGCCTTCCCGATCACATGCTGCTATCAAAT CGAGTTGCGGGTCTACAAGCGCACCATCGTCAATTGCAACTACGATTATCACCCGCGAAAGCTCAGTTTCTACAGCCTGA CGGTTGCCGTCTAG
Upstream 100 bases:
>100_bases TTTACAACTAACTCCATCCACGACCACGAAGCAAGGCACTGTTCTGGTCTCAGTACGCACGTCGGGATTAGAAGGATTCA GTATTAGAAGGAGGTTCGTA
Downstream 100 bases:
>100_bases GAGAGCGGTGAGTGCGTGTTAGCCGGTACGGCATTTTCTACCGAATCGGCTAACACCACTCGCCAACACTGAATATCACG GATTGCTGTTATGTCATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MADQKQSRRLSFEIPLDASSVDDFSPETPVKVVVEGAGNILHSSLARFDKTGRAVVRVELSGAPDTLNIIVGPADAEDED LPRLQSISRTISARTLQERQFKLEPISISTYYWHWWRRWCRYFVITGRVVCPDGKPVPGARVCAFDIDHWWWWSSRQQVG CDTTDANGAFTIKFRWCCGWWPWWWWRIRYWQLEPWLVDLLRPIVEQVPDFPIPIPDPRPSPAVFAPLLERDGQAMALVS QPFDTAVLPALREKLRTRLPHIPELEQLRIWPWAPWQPWWDCTPDIIFQVTQQCEGRLKVIVDETIADTRWNIPTNMSVT LVANEAACCIDNPPPPEGNCVVVANVCSSLSNNIGGNMGAIPAPAGYLNPNVAALYGDRPFAGTVSIGGQFGSAAMVDFY EFEWATSPGGPWQPMPPAAVGNFTRTFWGPALPAGPVDFHTVPINFTPISGRLVAPSRTFFEANNAPGSWGLSRFWVSNP NLLLQWLTTNTFTDGTYYLRLVGYQNTGTGANPQLGHPQILPICNTDHPNYLVLTIDNSTSNLEPAADIVAVRINGSLAD PCANIIADSGGTLEIDFIAYDVGQHLAFYTLEATYGKNGRVNLLTCPGATLTPISLPPTAPAADQVGPDYGAARSQGATA PHWRGGGLRLTIPDLRCAFPITCCYQIELRVYKRTIVNCNYDYHPRKLSFYSLTVAV
Sequences:
>Translated_697_residues MADQKQSRRLSFEIPLDASSVDDFSPETPVKVVVEGAGNILHSSLARFDKTGRAVVRVELSGAPDTLNIIVGPADAEDED LPRLQSISRTISARTLQERQFKLEPISISTYYWHWWRRWCRYFVITGRVVCPDGKPVPGARVCAFDIDHWWWWSSRQQVG CDTTDANGAFTIKFRWCCGWWPWWWWRIRYWQLEPWLVDLLRPIVEQVPDFPIPIPDPRPSPAVFAPLLERDGQAMALVS QPFDTAVLPALREKLRTRLPHIPELEQLRIWPWAPWQPWWDCTPDIIFQVTQQCEGRLKVIVDETIADTRWNIPTNMSVT LVANEAACCIDNPPPPEGNCVVVANVCSSLSNNIGGNMGAIPAPAGYLNPNVAALYGDRPFAGTVSIGGQFGSAAMVDFY EFEWATSPGGPWQPMPPAAVGNFTRTFWGPALPAGPVDFHTVPINFTPISGRLVAPSRTFFEANNAPGSWGLSRFWVSNP NLLLQWLTTNTFTDGTYYLRLVGYQNTGTGANPQLGHPQILPICNTDHPNYLVLTIDNSTSNLEPAADIVAVRINGSLAD PCANIIADSGGTLEIDFIAYDVGQHLAFYTLEATYGKNGRVNLLTCPGATLTPISLPPTAPAADQVGPDYGAARSQGATA PHWRGGGLRLTIPDLRCAFPITCCYQIELRVYKRTIVNCNYDYHPRKLSFYSLTVAV >Mature_696_residues ADQKQSRRLSFEIPLDASSVDDFSPETPVKVVVEGAGNILHSSLARFDKTGRAVVRVELSGAPDTLNIIVGPADAEDEDL PRLQSISRTISARTLQERQFKLEPISISTYYWHWWRRWCRYFVITGRVVCPDGKPVPGARVCAFDIDHWWWWSSRQQVGC DTTDANGAFTIKFRWCCGWWPWWWWRIRYWQLEPWLVDLLRPIVEQVPDFPIPIPDPRPSPAVFAPLLERDGQAMALVSQ PFDTAVLPALREKLRTRLPHIPELEQLRIWPWAPWQPWWDCTPDIIFQVTQQCEGRLKVIVDETIADTRWNIPTNMSVTL VANEAACCIDNPPPPEGNCVVVANVCSSLSNNIGGNMGAIPAPAGYLNPNVAALYGDRPFAGTVSIGGQFGSAAMVDFYE FEWATSPGGPWQPMPPAAVGNFTRTFWGPALPAGPVDFHTVPINFTPISGRLVAPSRTFFEANNAPGSWGLSRFWVSNPN LLLQWLTTNTFTDGTYYLRLVGYQNTGTGANPQLGHPQILPICNTDHPNYLVLTIDNSTSNLEPAADIVAVRINGSLADP CANIIADSGGTLEIDFIAYDVGQHLAFYTLEATYGKNGRVNLLTCPGATLTPISLPPTAPAADQVGPDYGAARSQGATAP HWRGGGLRLTIPDLRCAFPITCCYQIELRVYKRTIVNCNYDYHPRKLSFYSLTVAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77450; Mature: 77318
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQKQSRRLSFEIPLDASSVDDFSPETPVKVVVEGAGNILHSSLARFDKTGRAVVRVEL CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEE SGAPDTLNIIVGPADAEDEDLPRLQSISRTISARTLQERQFKLEPISISTYYWHWWRRWC CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCEEECEEEEEEEHHHHHHHHH RYFVITGRVVCPDGKPVPGARVCAFDIDHWWWWSSRQQVGCDTTDANGAFTIKFRWCCGW EEEEEECEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECC WPWWWWRIRYWQLEPWLVDLLRPIVEQVPDFPIPIPDPRPSPAVFAPLLERDGQAMALVS CCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE QPFDTAVLPALREKLRTRLPHIPELEQLRIWPWAPWQPWWDCTPDIIFQVTQQCEGRLKV CCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEE IVDETIADTRWNIPTNMSVTLVANEAACCIDNPPPPEGNCVVVANVCSSLSNNIGGNMGA EEECCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCC IPAPAGYLNPNVAALYGDRPFAGTVSIGGQFGSAAMVDFYEFEWATSPGGPWQPMPPAAV CCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHH GNFTRTFWGPALPAGPVDFHTVPINFTPISGRLVAPSRTFFEANNAPGSWGLSRFWVSNP CCCHHHHCCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEECCCCCCCCCCEEEEECCC NLLLQWLTTNTFTDGTYYLRLVGYQNTGTGANPQLGHPQILPICNTDHPNYLVLTIDNST CEEEEEEECCEECCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCC SNLEPAADIVAVRINGSLADPCANIIADSGGTLEIDFIAYDVGQHLAFYTLEATYGKNGR CCCCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCE VNLLTCPGATLTPISLPPTAPAADQVGPDYGAARSQGATAPHWRGGGLRLTIPDLRCAFP EEEEECCCCEECCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC ITCCYQIELRVYKRTIVNCNYDYHPRKLSFYSLTVAV EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEC >Mature Secondary Structure ADQKQSRRLSFEIPLDASSVDDFSPETPVKVVVEGAGNILHSSLARFDKTGRAVVRVEL CCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEEEE SGAPDTLNIIVGPADAEDEDLPRLQSISRTISARTLQERQFKLEPISISTYYWHWWRRWC CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCEEECEEEEEEEHHHHHHHHH RYFVITGRVVCPDGKPVPGARVCAFDIDHWWWWSSRQQVGCDTTDANGAFTIKFRWCCGW EEEEEECEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEEEECC WPWWWWRIRYWQLEPWLVDLLRPIVEQVPDFPIPIPDPRPSPAVFAPLLERDGQAMALVS CCCCEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEE QPFDTAVLPALREKLRTRLPHIPELEQLRIWPWAPWQPWWDCTPDIIFQVTQQCEGRLKV CCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHCCCEEEE IVDETIADTRWNIPTNMSVTLVANEAACCIDNPPPPEGNCVVVANVCSSLSNNIGGNMGA EEECCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCEEEEHHHHHHHHHHCCCCCCC IPAPAGYLNPNVAALYGDRPFAGTVSIGGQFGSAAMVDFYEFEWATSPGGPWQPMPPAAV CCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHH GNFTRTFWGPALPAGPVDFHTVPINFTPISGRLVAPSRTFFEANNAPGSWGLSRFWVSNP CCCHHHHCCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEECCCCCCCCCCEEEEECCC NLLLQWLTTNTFTDGTYYLRLVGYQNTGTGANPQLGHPQILPICNTDHPNYLVLTIDNST CEEEEEEECCEECCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCC SNLEPAADIVAVRINGSLADPCANIIADSGGTLEIDFIAYDVGQHLAFYTLEATYGKNGR CCCCCCCEEEEEEECCCCCCHHHHHHCCCCCEEEEEEEEEECCCCEEEEEEEEECCCCCE VNLLTCPGATLTPISLPPTAPAADQVGPDYGAARSQGATAPHWRGGGLRLTIPDLRCAFP EEEEECCCCEECCEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC ITCCYQIELRVYKRTIVNCNYDYHPRKLSFYSLTVAV EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA