Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is recX [H]

Identifier: 222524507

GI number: 222524507

Start: 1566456

End: 1567133

Strand: Reverse

Name: recX [H]

Synonym: Chy400_1231

Alternate gene names: 222524507

Gene position: 1567133-1566456 (Counterclockwise)

Preceding gene: 222524509

Following gene: 222524506

Centisome position: 29.74

GC content: 56.19

Gene sequence:

>678_bases
ATGCCTGCTGGAACAATCACTGCAATTCGGCAACAAACGAACGACGCGCAGCGTGTGAATATCTTTATCGACGGTGAGTT
TGCGATTGGGATTAGCCTCAATACTCTCACCCGTATGCGCCTGGCGGTTGGCGTGCATCTCGACGATCACGGCTGGCAAC
AGCTCGTTGCTTGTGAAGAGGCTGATCAGGCGATGCAAAAGGCCCTGCGCCAGCTTGAACGACGACCACGTTCCGTCAAT
GAAATCTATCGCTATTTGCAACGCAAAGGCTTTCGCGAAGCGATCTGTCAACAGGTCGTTGCCCGGTTACAGGAATTAGG
CCTGCTCAATGATGCCGACTTCGCCGAGCGTTGGGTCGCAAACCGGCGTACACTGCGCTATCGAGGTGAACGGGCTTTGC
GCGCAGAACTACGCCAGAAAGGGATTGCACCCGAGTTGATCGAGGATGCACTATCCGGCGAGAAAGACGAACTTGGGGAA
GCGTTGCGGGCAGAGCAGGCAGCTCGTGCTGTGTTAGCGCGTTACCTCAGGCATACTGACTGGCTGACGTTCCAACGCCG
ACTGGGTGGATATTTGCTGCGTCGGGGTTTTGCGAGCGATCTGGTGCGTCCACTGCTCCTGCGCCTCTGGCGAGAAGCGC
ATCCTGCTGACGACATCGATGATGAGGAACCCTATTGA

Upstream 100 bases:

>100_bases
ACATGGGCGGTGTCGGGCGCACAAGGGGAAGCATCTGGCTGGCGAACCTCTGCGTCGTAGTGGCGGTGTCCGTCTCGTGC
GCCAATTCTGACTGTATCGT

Downstream 100 bases:

>100_bases
ACAGGTCGTGATTGTCCTGACATGCTCATACACGCACGGCGCGAGCGAGTACCCCTTGACCGGCAAGAATTGTGATAAGC
GTACCTTTCAGCGTACCGTG

Product: regulatory protein RecX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEEADQAMQKALRQLERRPRSVN
EIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVANRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGE
ALRAEQAARAVLARYLRHTDWLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY

Sequences:

>Translated_225_residues
MPAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEEADQAMQKALRQLERRPRSVN
EIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVANRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGE
ALRAEQAARAVLARYLRHTDWLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY
>Mature_224_residues
PAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEEADQAMQKALRQLERRPRSVNE
IYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVANRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGEA
LRAEQAARAVLARYLRHTDWLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY

Specific function: Modulates recA activity [H]

COG id: COG2137

COG function: function code R; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003783 [H]

Pfam domain/function: PF02631 RecX [H]

EC number: NA

Molecular weight: Translated: 26003; Mature: 25872

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEE
CCCCHHHHHHHHCCCCEEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ADQAMQKALRQLERRPRSVNEIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGEALRAEQAARAVLARYLRHTD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PAGTITAIRQQTNDAQRVNIFIDGEFAIGISLNTLTRMRLAVGVHLDDHGWQQLVACEE
CCCHHHHHHHHCCCCEEEEEEEECCEEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ADQAMQKALRQLERRPRSVNEIYRYLQRKGFREAICQQVVARLQELGLLNDADFAERWVA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NRRTLRYRGERALRAELRQKGIAPELIEDALSGEKDELGEALRAEQAARAVLARYLRHTD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WLTFQRRLGGYLLRRGFASDLVRPLLLRLWREAHPADDIDDEEPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA