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The map label for this gene is ycjN [C]

Identifier: 222524487

GI number: 222524487

Start: 1543942

End: 1545339

Strand: Direct

Name: ycjN [C]

Synonym: Chy400_1211

Alternate gene names: 222524487

Gene position: 1543942-1545339 (Clockwise)

Preceding gene: 222524486

Following gene: 222524488

Centisome position: 29.3

GC content: 51.86

Gene sequence:

>1398_bases
ATGCGTCGCATCTTTGCGCTACCGCTTGCGATTATTAGCCTGATCAGCCTCACCCTGAGTGCGTGTGGTTCATCAACCCC
TCAGACTGCTCAACCACAAATCGTTACTCAAATCGTTCGGGAAACCCAAATTGTTGAAGTCGAAAAGACGGTTGAGGTCG
TCGTCACACCAACACCTGGCCCCCATCCTGAAGCTGTCATCAGTGGGGTGGAAGAGGGAGCAGAAATTACCTTCTGGACA
TTCTACCTCTCACCAACATTTGATCAGTACATCAAAGACACCATAGCGCGTTTCAATGAAGCCTATCCGGGTGTTAAGGT
CAGATGGGAAGACCGTCAGGCTACCTTGCAAGAAGAGTACCGCAACAGTCTAGCCGCCGGTAATGCCCCAGATGTCGTCA
ACATTCCAACCGATTGGGTTCTGGAGTTTGCCCAAAAAGGGCAGCTCTTGAATATGAGCGAAGCCTTACCGCCAGAGGTG
CAGAAACAGTATTTTGAAGGTCTCTTCAATCAGGTTAATGTTGGCGGTGCCAGCTATCAGGTGCCGTGGTATCAGGCAGT
CGATGGGTATCTGGTGAACAAGCAGCTCCTGACACAAGCCGGATTGACCATCGACGACCTACCCAAAACCTTCGACGAAC
AGAAAGAGTTCTGTGCCAGAGTGAAAGCCGCGACCGGCATTCCCTGTGGTCTGCGGCTAAATACCGGCAATTTGTTGCAG
AGTATGGCCTACGAAGGCAATGTCACGATTATGGATGCCAATGGCCGTTTCGTCTTCGACTCGCCGGAAGCGGTAAGCTG
GCTTCAGTACTACGTCGATATGATCAAGGACGAAACAACTGCGCGTGACATTCTCTTGCTCAACAGCAGTGACGACCGGA
TCGGTCTGGAGCGCTTCTCGGCAGGGCAAATGCCGTTTTACGTTACTGGTCCACAATTGATCCGATTGGTGCGTGAGAGC
AATCCCGGATTATACGGCTATCTGGCAATGGTTCCCCGGGCAGTAGGGCGCTCTGGAAAGCTCCCGCCGGTCTCGATGTC
AATTGTCGTATCGAAGAATACCAAGTATCCTCGTGCAGCGGCGGCACTGGCTGTGTTCTTCACCAATCCTCGGAGCATGC
TTGAATTCTCGAAACTGGTGCAAATCTTTCCTTCCACTCCAGCCTCTTATGATGATCCCTTCTTCACACAGCCACCGGTC
GCAATTGAAGATCAGATCCGGCCAATTGCGCGTGACATTATCGCACGGCAAAGCAATATTTTGCCCGAAATCCCGCGCTT
GAACGAGGTGAATGAGATTGTACGTCAGGCGATTGAAGCAGCCATTTTCGGCGGTGTACCGGCAGAACAGGCGCTAAAAG
ATGCCGTTACGCAGGCGAATACGTTGATCGGAAAGTAG

Upstream 100 bases:

>100_bases
TCCAGTATCTACACGAGAAAGGAGGTGACAACTGACGTAAAGCCAGTTAATAACCCGATACACTTGCAACATTTAGTCTT
CAGTGCAAAGGAGAAGTCTT

Downstream 100 bases:

>100_bases
GGTTAACGACAGACCATCGTTTGCCCATTCAAACGGGGCGGTCGTTACCGCCCCGTTAATGGAGAAAGGTATGAAGGCAC
GAATATGGTCGCGGGTAACA

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MRRIFALPLAIISLISLTLSACGSSTPQTAQPQIVTQIVRETQIVEVEKTVEVVVTPTPGPHPEAVISGVEEGAEITFWT
FYLSPTFDQYIKDTIARFNEAYPGVKVRWEDRQATLQEEYRNSLAAGNAPDVVNIPTDWVLEFAQKGQLLNMSEALPPEV
QKQYFEGLFNQVNVGGASYQVPWYQAVDGYLVNKQLLTQAGLTIDDLPKTFDEQKEFCARVKAATGIPCGLRLNTGNLLQ
SMAYEGNVTIMDANGRFVFDSPEAVSWLQYYVDMIKDETTARDILLLNSSDDRIGLERFSAGQMPFYVTGPQLIRLVRES
NPGLYGYLAMVPRAVGRSGKLPPVSMSIVVSKNTKYPRAAAALAVFFTNPRSMLEFSKLVQIFPSTPASYDDPFFTQPPV
AIEDQIRPIARDIIARQSNILPEIPRLNEVNEIVRQAIEAAIFGGVPAEQALKDAVTQANTLIGK

Sequences:

>Translated_465_residues
MRRIFALPLAIISLISLTLSACGSSTPQTAQPQIVTQIVRETQIVEVEKTVEVVVTPTPGPHPEAVISGVEEGAEITFWT
FYLSPTFDQYIKDTIARFNEAYPGVKVRWEDRQATLQEEYRNSLAAGNAPDVVNIPTDWVLEFAQKGQLLNMSEALPPEV
QKQYFEGLFNQVNVGGASYQVPWYQAVDGYLVNKQLLTQAGLTIDDLPKTFDEQKEFCARVKAATGIPCGLRLNTGNLLQ
SMAYEGNVTIMDANGRFVFDSPEAVSWLQYYVDMIKDETTARDILLLNSSDDRIGLERFSAGQMPFYVTGPQLIRLVRES
NPGLYGYLAMVPRAVGRSGKLPPVSMSIVVSKNTKYPRAAAALAVFFTNPRSMLEFSKLVQIFPSTPASYDDPFFTQPPV
AIEDQIRPIARDIIARQSNILPEIPRLNEVNEIVRQAIEAAIFGGVPAEQALKDAVTQANTLIGK
>Mature_465_residues
MRRIFALPLAIISLISLTLSACGSSTPQTAQPQIVTQIVRETQIVEVEKTVEVVVTPTPGPHPEAVISGVEEGAEITFWT
FYLSPTFDQYIKDTIARFNEAYPGVKVRWEDRQATLQEEYRNSLAAGNAPDVVNIPTDWVLEFAQKGQLLNMSEALPPEV
QKQYFEGLFNQVNVGGASYQVPWYQAVDGYLVNKQLLTQAGLTIDDLPKTFDEQKEFCARVKAATGIPCGLRLNTGNLLQ
SMAYEGNVTIMDANGRFVFDSPEAVSWLQYYVDMIKDETTARDILLLNSSDDRIGLERFSAGQMPFYVTGPQLIRLVRES
NPGLYGYLAMVPRAVGRSGKLPPVSMSIVVSKNTKYPRAAAALAVFFTNPRSMLEFSKLVQIFPSTPASYDDPFFTQPPV
AIEDQIRPIARDIIARQSNILPEIPRLNEVNEIVRQAIEAAIFGGVPAEQALKDAVTQANTLIGK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 51460; Mature: 51460

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRIFALPLAIISLISLTLSACGSSTPQTAQPQIVTQIVRETQIVEVEKTVEVVVTPTPG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECEEEEEEECCCC
PHPEAVISGVEEGAEITFWTFYLSPTFDQYIKDTIARFNEAYPGVKVRWEDRQATLQEEY
CCHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH
RNSLAAGNAPDVVNIPTDWVLEFAQKGQLLNMSEALPPEVQKQYFEGLFNQVNVGGASYQ
HHHHCCCCCCCEEECCHHHHHHHHHCCCEECCHHCCCHHHHHHHHHHHHHHCCCCCCEEC
VPWYQAVDGYLVNKQLLTQAGLTIDDLPKTFDEQKEFCARVKAATGIPCGLRLNTGNLLQ
CCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHH
SMAYEGNVTIMDANGRFVFDSPEAVSWLQYYVDMIKDETTARDILLLNSSDDRIGLERFS
HHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHC
AGQMPFYVTGPQLIRLVRESNPGLYGYLAMVPRAVGRSGKLPPVSMSIVVSKNTKYPRAA
CCCCCEEECCHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHH
AALAVFFTNPRSMLEFSKLVQIFPSTPASYDDPFFTQPPVAIEDQIRPIARDIIARQSNI
HEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
LPEIPRLNEVNEIVRQAIEAAIFGGVPAEQALKDAVTQANTLIGK
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRIFALPLAIISLISLTLSACGSSTPQTAQPQIVTQIVRETQIVEVEKTVEVVVTPTPG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEECEEEEEEECCCC
PHPEAVISGVEEGAEITFWTFYLSPTFDQYIKDTIARFNEAYPGVKVRWEDRQATLQEEY
CCHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH
RNSLAAGNAPDVVNIPTDWVLEFAQKGQLLNMSEALPPEVQKQYFEGLFNQVNVGGASYQ
HHHHCCCCCCCEEECCHHHHHHHHHCCCEECCHHCCCHHHHHHHHHHHHHHCCCCCCEEC
VPWYQAVDGYLVNKQLLTQAGLTIDDLPKTFDEQKEFCARVKAATGIPCGLRLNTGNLLQ
CCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHH
SMAYEGNVTIMDANGRFVFDSPEAVSWLQYYVDMIKDETTARDILLLNSSDDRIGLERFS
HHHCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHC
AGQMPFYVTGPQLIRLVRESNPGLYGYLAMVPRAVGRSGKLPPVSMSIVVSKNTKYPRAA
CCCCCEEECCHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHH
AALAVFFTNPRSMLEFSKLVQIFPSTPASYDDPFFTQPPVAIEDQIRPIARDIIARQSNI
HEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
LPEIPRLNEVNEIVRQAIEAAIFGGVPAEQALKDAVTQANTLIGK
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA