| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222524478
Identifier: 222524478
GI number: 222524478
Start: 1532367
End: 1533191
Strand: Direct
Name: 222524478
Synonym: Chy400_1202
Alternate gene names: NA
Gene position: 1532367-1533191 (Clockwise)
Preceding gene: 222524477
Following gene: 222524479
Centisome position: 29.08
GC content: 59.03
Gene sequence:
>825_bases TTGACGACTGACGTAGTTATAGCCGGATTGGTTGCGCTTTTGCTATATCCGGGTATATTATTTGCAATAGGGTTAAGTAT CGGTTATCGAATCCTGTCCGGTCGGCCACTGCCATTTCCCGGTAAAATGATCGTCAGTCCTGATCTCACCGGCGGTCTGG GGTTGACATCGCTGGCGTTGATCGGTGGGGGTCTGGCCGGTTTGACCTGGCCAGGGCATCCGTGGTCATTACCGTTCGGT TGGATCGGTAGCTGGGCATTGTTTGAACTGGCTGCATGGTTACCATTGTTGCCGGCCCTGATGGCAGGTGCACCTCGTAC AGTCCGTGCTGCGCTACGGGAAGCGCAAATCGGCATGCTGGCACGGGCGATACTGTGGGGAAGTATTGCCACCGGCCTGG CCGCCGCCGACAATCTCAATGGCTGGTCACTAAGCGGACACGGCTTCGTCCTGGTGAGTGCTCTCCTGAGCCTGCCGGCA GCTATCAACTGGGGACCATTCGGCCCTGAACCATCACTTGGCCCGCAGGGGATCACGGAAGGTCTTTCCACCCGGGCGGC AACAACGCTGACGTTCGCCCGCGATACACTGGCTGCGGCACTCATTGCCACCATCTGGCTGGCCGGTTTCCCAATAGCAG TGCTGCCAGTGTGGCTGGGCTTGTTGGTGATTGGGATTGGGAGTATCATCACCACACTGGGATTACGGTGGCTCAACGGA CGCTTTCCGCGCTTTAGCGTGCCGGCTGCGCTGCGAGTCATCCTCATCGGGGCAGGTAGCCTGGCCGGAGTGGCCCTGGT AGCCTTGTCTGTGGGGCAGATGTAG
Upstream 100 bases:
>100_bases ATTGGGATGACCCCGCAAACATTACTGACCACGATTGAAGCCGCCGTGCGCAGCCTGGCAGCACTGAGTTCGGGATAACC GGTGGTCATGGGAGGCAAAA
Downstream 100 bases:
>100_bases CCACGGTAGAGACCATGAACTGGAGATCAACCTAATGACCGATGTCATCGTTGTCGAAGGACTTACCAAAAGCTACGGTC ATGTCTCGGTCTTGCGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTTDVVIAGLVALLLYPGILFAIGLSIGYRILSGRPLPFPGKMIVSPDLTGGLGLTSLALIGGGLAGLTWPGHPWSLPFG WIGSWALFELAAWLPLLPALMAGAPRTVRAALREAQIGMLARAILWGSIATGLAAADNLNGWSLSGHGFVLVSALLSLPA AINWGPFGPEPSLGPQGITEGLSTRAATTLTFARDTLAAALIATIWLAGFPIAVLPVWLGLLVIGIGSIITTLGLRWLNG RFPRFSVPAALRVILIGAGSLAGVALVALSVGQM
Sequences:
>Translated_274_residues MTTDVVIAGLVALLLYPGILFAIGLSIGYRILSGRPLPFPGKMIVSPDLTGGLGLTSLALIGGGLAGLTWPGHPWSLPFG WIGSWALFELAAWLPLLPALMAGAPRTVRAALREAQIGMLARAILWGSIATGLAAADNLNGWSLSGHGFVLVSALLSLPA AINWGPFGPEPSLGPQGITEGLSTRAATTLTFARDTLAAALIATIWLAGFPIAVLPVWLGLLVIGIGSIITTLGLRWLNG RFPRFSVPAALRVILIGAGSLAGVALVALSVGQM >Mature_273_residues TTDVVIAGLVALLLYPGILFAIGLSIGYRILSGRPLPFPGKMIVSPDLTGGLGLTSLALIGGGLAGLTWPGHPWSLPFGW IGSWALFELAAWLPLLPALMAGAPRTVRAALREAQIGMLARAILWGSIATGLAAADNLNGWSLSGHGFVLVSALLSLPAA INWGPFGPEPSLGPQGITEGLSTRAATTLTFARDTLAAALIATIWLAGFPIAVLPVWLGLLVIGIGSIITTLGLRWLNGR FPRFSVPAALRVILIGAGSLAGVALVALSVGQM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28159; Mature: 28028
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDVVIAGLVALLLYPGILFAIGLSIGYRILSGRPLPFPGKMIVSPDLTGGLGLTSLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHH IGGGLAGLTWPGHPWSLPFGWIGSWALFELAAWLPLLPALMAGAPRTVRAALREAQIGML HCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ARAILWGSIATGLAAADNLNGWSLSGHGFVLVSALLSLPAAINWGPFGPEPSLGPQGITE HHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH GLSTRAATTLTFARDTLAAALIATIWLAGFPIAVLPVWLGLLVIGIGSIITTLGLRWLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RFPRFSVPAALRVILIGAGSLAGVALVALSVGQM CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TTDVVIAGLVALLLYPGILFAIGLSIGYRILSGRPLPFPGKMIVSPDLTGGLGLTSLAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHH IGGGLAGLTWPGHPWSLPFGWIGSWALFELAAWLPLLPALMAGAPRTVRAALREAQIGML HCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH ARAILWGSIATGLAAADNLNGWSLSGHGFVLVSALLSLPAAINWGPFGPEPSLGPQGITE HHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH GLSTRAATTLTFARDTLAAALIATIWLAGFPIAVLPVWLGLLVIGIGSIITTLGLRWLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RFPRFSVPAALRVILIGAGSLAGVALVALSVGQM CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA