| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524468
Identifier: 222524468
GI number: 222524468
Start: 1513515
End: 1516169
Strand: Reverse
Name: 222524468
Synonym: Chy400_1192
Alternate gene names: NA
Gene position: 1516169-1513515 (Counterclockwise)
Preceding gene: 222524469
Following gene: 222524466
Centisome position: 28.78
GC content: 62.22
Gene sequence:
>2655_bases ATGCGGCGTCTTTGTCTCTTCTTTGCTGTTGCCGCACTTTTAGTAGTGGCTGCGCCTGCAACCTGGGCGCAGCCATCCAC CGGCCTGATCCTGCACCAACGGCCCGATGGGGTTGAGATTGTCTGGACGGCAGATCAGTCATCTGAGCCGCAACGATTGT TACTCTACCTCACGGCGGATGCTTCACCGTCGCCTGTCTTGCGCGAGTTGCAAGACCAGCCACTCAATAGGCCGCTTGCC CTACCATCCCTGCCCACTGTGGTTGTCGATGGCGAGCCGCGCCCACCGCTGCCGTCATTCGCCCCAGCACCACCGACGGC GCCCCTGCGTCTGCTCGGTGAAGGTTATCGGCAAGGCATGCGGTTGGCCCTGTATGAAATCTCTCCCTATTACCGGGCGC CCAATGGCCCCCGGCAGGCGCTATGGCTACGGGCATTTGTCGCCGGAGCAATGCTGGCTCCAACCCATCATCAGCCGGCA GTGGGTCTGAGTAGTGCCCCGCTGCCCGACCCGATTGCGACACGACCGGCCTGGACAATCGATGTCTCGGCGGAAGGTAT CCAGGAGATTGATGCGAACACGTTGCGTTCGCTCGGCCTCGATCTGGATCAGGTCGCGCTGACGCAATTGCGCCTCTACC GTGCCGGGAGAACGCTGCCGCTGGAACCGGTGATCGGTGGCGCGAGCGTGACCGCCCTGCGCTTCTACGCACCTCCCCCC GGAGATCGCTGGTCGGCGTCTGATCGTTACTGGCTCACGGTTGAGCCGGGGGCCAGTCTGAACCTGATGGCCAGCCGAAC CGCGCAGCCACAGGCCGGTGATGTACCGGCAGGGATCACCGTGAGCGGAAGCGGGCCGGATGAAACGCCGACCATCTATG AGTCGACGCTGGCCGGTTTTGATGGCGATTACTTCTTTCGCCGTCAGCTCGATGCCAGTGCAGGCGCACCGGTCAGCACG ACCCTGACGATCACCCCAACTCTGCCATTCGCCACCAGTGGCTCGATGCAGGTAACGTTTGAACTGGCCACGCTGGTGCG GCACAGTGGTACGCATCGGCTGCGGGTGGCTGCCGGGAACGGCTGGAGTACGTCGCTGGAGTGGAGCGGGCACGGTAGCC ATCGCGCCGATATAACGCTGCCGTCGCCGACGACGGTGCTCACGCTGACCCTCGATCCGATCAGTGGGATTGACCGCATC TATCTGGATCGGCTCCTCTACCAGGCGCCGGCGCAGATTAACCTCACCTCTGCCGGTGCGATCTTTAGCGGTCAGGCCGG GCGTTTTGCCTATCCGCTTACCGGCATGGCGCCTGGAAGTGCGGTGTACGACATCAGTGATCCGTACCAACCGGTGCGGT TGCACTTTAGCGGTACAACCTTTGCCGATGATGCACCTGCGCCACGTCGCTATCTGGTGACCGGTTCGGCCACACTGCAC ACACCGCTGGTAGCGCGTCACAATCCGGTTGATGTGACGACCCCACGGCAGGCGCGGGCGATCTACATTGCGCCGCGAGC GCTGATTGGTGAACTGGAACCTTTGCTTGCCCGTCGCCAGGCCCAGGGCTGGTCACCGCTAGCCATTGCCGTCGAAGATG TGTATGCCGGTTGGAGTGGTGGCGAACCTGATCCGCGGGCCATCCGCGATTTTCTGCGCTACGCTGCCGCGACCTGGTCG CCTGCTCCAGAGGCGGTGATTCTGGTTGGTGATGGCAGTTCTGACCCACGCGATTATCTGCGGCGCGGCTGGCCGACACT GATTCCGCCGTATCTGGCCGAGGTAGACCCGTGGTTGGGCGAGACGGCCTGTGAAGTCTGTTTTGCCCAACTGGACGGTG ATGATCCAACGGCTGAAACCCTCTTTCAGGCCGATCTCTGGATCGGACGCCTGCCGGTGAAGACTGCGGAAGAGCTGCGT CGGCTGGTCGCAAAAATGCTTGCCTACGAGCAGAGCCGGGGTGCCTGGCAACGTCATGCCGTCTATCTGGCCGACAATCC CGACAGTAGCGGTGATTTTGCGGCTATGCTCGACGATGCTATCGGCTTGCAACCATCGCAAACAAGTACTACTCGCGTCT ACTACAACCCGGATGGCGGTGAGGGCAGGATTGCTGATGCCAACCTGGCGCGTCAGCAGGCATTTGCGGCCTTCAACCAG GGTGCCGGCTTGCTTGTCTACGCCGGTCATGGCTTGCAGTTTCAGTGGGCATTTACGGCTTTTGGTGTTGACGAGCCATT TCTGCTCAACGTCGATACGGCCACCGATCTGCGCAATGGTTCGGCGTTGCCGGTTGTGTTGAGTATGACGTGTTTGACCG GCGCGTTTCAGCATCCCTCGTTTCGGGGCACGACCATTGATGAAGCCCTGGTCTTAAATCCTGACGGCGGTGCGATTGCC GCCTGGAGTTCCAGCGGCTTCGGGGTCGCTTACGGTCATCGTCAACTGCTGTTGGGCTTTGTGGAAGCTCTCTGGAGCTG GCACGCAACCTCGCCACCGCCGCTCGGTCACCTGGTGGCTGCCGGTTATGCCGAACTGGCCGCCAGTGGCGAGGCGCCGG CATCGTTGCGGACATTCCTGTTGCTCGGCGATCCGCTGACACCGGTAGCGGCGCGGCCACTCTACCGGGTGGATGTGCCG CTGCTCCAGCGCTGA
Upstream 100 bases:
>100_bases TGTCGCGTTCGTTGCTGATCCTGATGGGTCTGGCACTGCTTGCGATTGGTATTGGCGCGTTCGTGCGCCGACGTTCATAT CGTTAGGAATTCGGAGTTCT
Downstream 100 bases:
>100_bases GCAGTTTCGGCTGCGAGCGTGTTCGGTAGATAGGGCTTAAAGAAGCCATGAACGCCCTCACCCCCGGCACCTCTCCCGCG CAGCGAGAGAGGGAAGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 884; Mature: 884
Protein sequence:
>884_residues MRRLCLFFAVAALLVVAAPATWAQPSTGLILHQRPDGVEIVWTADQSSEPQRLLLYLTADASPSPVLRELQDQPLNRPLA LPSLPTVVVDGEPRPPLPSFAPAPPTAPLRLLGEGYRQGMRLALYEISPYYRAPNGPRQALWLRAFVAGAMLAPTHHQPA VGLSSAPLPDPIATRPAWTIDVSAEGIQEIDANTLRSLGLDLDQVALTQLRLYRAGRTLPLEPVIGGASVTALRFYAPPP GDRWSASDRYWLTVEPGASLNLMASRTAQPQAGDVPAGITVSGSGPDETPTIYESTLAGFDGDYFFRRQLDASAGAPVST TLTITPTLPFATSGSMQVTFELATLVRHSGTHRLRVAAGNGWSTSLEWSGHGSHRADITLPSPTTVLTLTLDPISGIDRI YLDRLLYQAPAQINLTSAGAIFSGQAGRFAYPLTGMAPGSAVYDISDPYQPVRLHFSGTTFADDAPAPRRYLVTGSATLH TPLVARHNPVDVTTPRQARAIYIAPRALIGELEPLLARRQAQGWSPLAIAVEDVYAGWSGGEPDPRAIRDFLRYAAATWS PAPEAVILVGDGSSDPRDYLRRGWPTLIPPYLAEVDPWLGETACEVCFAQLDGDDPTAETLFQADLWIGRLPVKTAEELR RLVAKMLAYEQSRGAWQRHAVYLADNPDSSGDFAAMLDDAIGLQPSQTSTTRVYYNPDGGEGRIADANLARQQAFAAFNQ GAGLLVYAGHGLQFQWAFTAFGVDEPFLLNVDTATDLRNGSALPVVLSMTCLTGAFQHPSFRGTTIDEALVLNPDGGAIA AWSSSGFGVAYGHRQLLLGFVEALWSWHATSPPPLGHLVAAGYAELAASGEAPASLRTFLLLGDPLTPVAARPLYRVDVP LLQR
Sequences:
>Translated_884_residues MRRLCLFFAVAALLVVAAPATWAQPSTGLILHQRPDGVEIVWTADQSSEPQRLLLYLTADASPSPVLRELQDQPLNRPLA LPSLPTVVVDGEPRPPLPSFAPAPPTAPLRLLGEGYRQGMRLALYEISPYYRAPNGPRQALWLRAFVAGAMLAPTHHQPA VGLSSAPLPDPIATRPAWTIDVSAEGIQEIDANTLRSLGLDLDQVALTQLRLYRAGRTLPLEPVIGGASVTALRFYAPPP GDRWSASDRYWLTVEPGASLNLMASRTAQPQAGDVPAGITVSGSGPDETPTIYESTLAGFDGDYFFRRQLDASAGAPVST TLTITPTLPFATSGSMQVTFELATLVRHSGTHRLRVAAGNGWSTSLEWSGHGSHRADITLPSPTTVLTLTLDPISGIDRI YLDRLLYQAPAQINLTSAGAIFSGQAGRFAYPLTGMAPGSAVYDISDPYQPVRLHFSGTTFADDAPAPRRYLVTGSATLH TPLVARHNPVDVTTPRQARAIYIAPRALIGELEPLLARRQAQGWSPLAIAVEDVYAGWSGGEPDPRAIRDFLRYAAATWS PAPEAVILVGDGSSDPRDYLRRGWPTLIPPYLAEVDPWLGETACEVCFAQLDGDDPTAETLFQADLWIGRLPVKTAEELR RLVAKMLAYEQSRGAWQRHAVYLADNPDSSGDFAAMLDDAIGLQPSQTSTTRVYYNPDGGEGRIADANLARQQAFAAFNQ GAGLLVYAGHGLQFQWAFTAFGVDEPFLLNVDTATDLRNGSALPVVLSMTCLTGAFQHPSFRGTTIDEALVLNPDGGAIA AWSSSGFGVAYGHRQLLLGFVEALWSWHATSPPPLGHLVAAGYAELAASGEAPASLRTFLLLGDPLTPVAARPLYRVDVP LLQR >Mature_884_residues MRRLCLFFAVAALLVVAAPATWAQPSTGLILHQRPDGVEIVWTADQSSEPQRLLLYLTADASPSPVLRELQDQPLNRPLA LPSLPTVVVDGEPRPPLPSFAPAPPTAPLRLLGEGYRQGMRLALYEISPYYRAPNGPRQALWLRAFVAGAMLAPTHHQPA VGLSSAPLPDPIATRPAWTIDVSAEGIQEIDANTLRSLGLDLDQVALTQLRLYRAGRTLPLEPVIGGASVTALRFYAPPP GDRWSASDRYWLTVEPGASLNLMASRTAQPQAGDVPAGITVSGSGPDETPTIYESTLAGFDGDYFFRRQLDASAGAPVST TLTITPTLPFATSGSMQVTFELATLVRHSGTHRLRVAAGNGWSTSLEWSGHGSHRADITLPSPTTVLTLTLDPISGIDRI YLDRLLYQAPAQINLTSAGAIFSGQAGRFAYPLTGMAPGSAVYDISDPYQPVRLHFSGTTFADDAPAPRRYLVTGSATLH TPLVARHNPVDVTTPRQARAIYIAPRALIGELEPLLARRQAQGWSPLAIAVEDVYAGWSGGEPDPRAIRDFLRYAAATWS PAPEAVILVGDGSSDPRDYLRRGWPTLIPPYLAEVDPWLGETACEVCFAQLDGDDPTAETLFQADLWIGRLPVKTAEELR RLVAKMLAYEQSRGAWQRHAVYLADNPDSSGDFAAMLDDAIGLQPSQTSTTRVYYNPDGGEGRIADANLARQQAFAAFNQ GAGLLVYAGHGLQFQWAFTAFGVDEPFLLNVDTATDLRNGSALPVVLSMTCLTGAFQHPSFRGTTIDEALVLNPDGGAIA AWSSSGFGVAYGHRQLLLGFVEALWSWHATSPPPLGHLVAAGYAELAASGEAPASLRTFLLLGDPLTPVAARPLYRVDVP LLQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94943; Mature: 94943
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLCLFFAVAALLVVAAPATWAQPSTGLILHQRPDGVEIVWTADQSSEPQRLLLYLTAD CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECC ASPSPVLRELQDQPLNRPLALPSLPTVVVDGEPRPPLPSFAPAPPTAPLRLLGEGYRQGM CCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RLALYEISPYYRAPNGPRQALWLRAFVAGAMLAPTHHQPAVGLSSAPLPDPIATRPAWTI EEEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE DVSAEGIQEIDANTLRSLGLDLDQVALTQLRLYRAGRTLPLEPVIGGASVTALRFYAPPP EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC GDRWSASDRYWLTVEPGASLNLMASRTAQPQAGDVPAGITVSGSGPDETPTIYESTLAGF CCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCC DGDYFFRRQLDASAGAPVSTTLTITPTLPFATSGSMQVTFELATLVRHSGTHRLRVAAGN CCCCHHHEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEECC GWSTSLEWSGHGSHRADITLPSPTTVLTLTLDPISGIDRIYLDRLLYQAPAQINLTSAGA CCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC IFSGQAGRFAYPLTGMAPGSAVYDISDPYQPVRLHFSGTTFADDAPAPRRYLVTGSATLH EECCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEC TPLVARHNPVDVTTPRQARAIYIAPRALIGELEPLLARRQAQGWSPLAIAVEDVYAGWSG CCEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCC GEPDPRAIRDFLRYAAATWSPAPEAVILVGDGSSDPRDYLRRGWPTLIPPYLAEVDPWLG CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCC ETACEVCFAQLDGDDPTAETLFQADLWIGRLPVKTAEELRRLVAKMLAYEQSRGAWQRHA HHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE VYLADNPDSSGDFAAMLDDAIGLQPSQTSTTRVYYNPDGGEGRIADANLARQQAFAAFNQ EEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECHHHHHHHHHHHHCC GAGLLVYAGHGLQFQWAFTAFGVDEPFLLNVDTATDLRNGSALPVVLSMTCLTGAFQHPS CCEEEEEECCCEEEEEEEEEECCCCCEEEEECCHHCCCCCCCCHHHEEHHHHHHCCCCCC FRGTTIDEALVLNPDGGAIAAWSSSGFGVAYGHRQLLLGFVEALWSWHATSPPPLGHLVA CCCCCCCCEEEECCCCCEEEEECCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHH AGYAELAASGEAPASLRTFLLLGDPLTPVAARPLYRVDVPLLQR HCHHHHHCCCCCCCCEEEEEEECCCCCHHHCCCEEEECCHHHCC >Mature Secondary Structure MRRLCLFFAVAALLVVAAPATWAQPSTGLILHQRPDGVEIVWTADQSSEPQRLLLYLTAD CCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEEECC ASPSPVLRELQDQPLNRPLALPSLPTVVVDGEPRPPLPSFAPAPPTAPLRLLGEGYRQGM CCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC RLALYEISPYYRAPNGPRQALWLRAFVAGAMLAPTHHQPAVGLSSAPLPDPIATRPAWTI EEEEEEECCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE DVSAEGIQEIDANTLRSLGLDLDQVALTQLRLYRAGRTLPLEPVIGGASVTALRFYAPPP EECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCC GDRWSASDRYWLTVEPGASLNLMASRTAQPQAGDVPAGITVSGSGPDETPTIYESTLAGF CCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCC DGDYFFRRQLDASAGAPVSTTLTITPTLPFATSGSMQVTFELATLVRHSGTHRLRVAAGN CCCCHHHEECCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEHHHHHCCCCCEEEEEECC GWSTSLEWSGHGSHRADITLPSPTTVLTLTLDPISGIDRIYLDRLLYQAPAQINLTSAGA CCCEEEEECCCCCCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCC IFSGQAGRFAYPLTGMAPGSAVYDISDPYQPVRLHFSGTTFADDAPAPRRYLVTGSATLH EECCCCCCEEECCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEC TPLVARHNPVDVTTPRQARAIYIAPRALIGELEPLLARRQAQGWSPLAIAVEDVYAGWSG CCEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCC GEPDPRAIRDFLRYAAATWSPAPEAVILVGDGSSDPRDYLRRGWPTLIPPYLAEVDPWLG CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCHHHHHCCCCCC ETACEVCFAQLDGDDPTAETLFQADLWIGRLPVKTAEELRRLVAKMLAYEQSRGAWQRHA HHHHHHHHHHCCCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE VYLADNPDSSGDFAAMLDDAIGLQPSQTSTTRVYYNPDGGEGRIADANLARQQAFAAFNQ EEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEECHHHHHHHHHHHHCC GAGLLVYAGHGLQFQWAFTAFGVDEPFLLNVDTATDLRNGSALPVVLSMTCLTGAFQHPS CCEEEEEECCCEEEEEEEEEECCCCCEEEEECCHHCCCCCCCCHHHEEHHHHHHCCCCCC FRGTTIDEALVLNPDGGAIAAWSSSGFGVAYGHRQLLLGFVEALWSWHATSPPPLGHLVA CCCCCCCCEEEECCCCCEEEEECCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCHHHHHH AGYAELAASGEAPASLRTFLLLGDPLTPVAARPLYRVDVPLLQR HCHHHHHCCCCCCCCEEEEEEECCCCCHHHCCCEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA