| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524460
Identifier: 222524460
GI number: 222524460
Start: 1504143
End: 1505351
Strand: Reverse
Name: 222524460
Synonym: Chy400_1184
Alternate gene names: NA
Gene position: 1505351-1504143 (Counterclockwise)
Preceding gene: 222524461
Following gene: 222524459
Centisome position: 28.57
GC content: 56.33
Gene sequence:
>1209_bases ATGCACAGGTGGAAACGCACGTTCGGTTGGTGGATGGTAATGGCGTTGGTTGCCACAATGCTGGCAGCATGTGGTGGCGG TGGCACAGGTGGAGGTGGTGGTGCAAGCAGTGAACCGATCAAGATTGGCGCGATTTTTGACCTGACCGGTGCAACAGCCG ACGTAGGAACGCCCTATGCCCGCGGACAGATTGCCTTTATTGATTGGAAAAATGAACAGGGCGGCATTAACGGGCGGCGC TTGCAGTTGGTGAGCGAAGACTATGCGTATCAGGTGCCGCGGGCGGAAGAGTTGTATACGCAATTCGTAACCCAGGATAA GGTGCTGGTCTTCTCAGGATGGGGTACCGGCGATACCGAAGCGCTTCGCCCCAAGATTACCGAAGACAAGATTCCGTTCA TCTCGGCCTCGTACTCGGCGACGCTGGCCAATCCGGCGGAAACGCCTTACAACTTCCTGGTTGCGCCGACCTACTCTGAC CAGTTGATTATCGCGATGAAGTGGGCGATTGATGACTGGAAGGCGAAGGGCAACAGTGGGATGCCGAAGTTTGCCTATCT GATCAACGATAGCCCCTTCGGTCGTTCGCCACTGGCCGATGGTACGGCCTTTGCCACATCGCAGGGTATCGATACCCCGC TTGAGGTTCCTTCGCCGCGTGGTGCAACCGATTTGACGCCACAGTTGACCCAGATTCGCGACTACGGTGCCAACTACATC TTCTTGCAGAACGTCTCTAGCCCGGCGGCACTGGCGATCAAGAATGCGAAAAGCCTGGGTTACGACGTACAATTCGTTTG CCTCAACTGGTGCGCAAACGAGATTTTGATCAAGCAGGCTGGGGCCGACGCTGAAGGTGTTGTTGGCGTGGTGCCCTTCA ACCACGAAGCGGAAGGTGGGAAGATTGCGCTTGATTACGCTCGCCAGAAGAATATTGACTACGGCGGTGCCGACAGCACC TTCGTGCAGGGGTGGACGGCACTGTCAATTCTGGTGGCCGGTATCGAGCGAACACTGGCGGACGGCAAAGAGCTGACCGG TGAGAATATCAAGAATACGCTGGAGACGATGGGTGCCATCGACACCAAGGGGGTAACGCTGCCGGTGCAGTTCAGCTCCA CCGATCACGCCGGTGTGAAGTCAACCCGCATGTTCCGGGTTGAAAATGGTAGGTGGGTAGCGATCACTGATTTCATTAGT GCGCGGTAA
Upstream 100 bases:
>100_bases ATCTTCGAGCCGGAAGGCATCGTTAAGATGTGGCGCAATGTTAAAGATTATTTCCGGCTATGGCCGTTCAGTTACTGAGG TGTGTAGCAAGGAGGATGGC
Downstream 100 bases:
>100_bases GTTACACGTGACCGGTGTGTTGTCTATTGACAACACACCGGTCATTCATAGCAGGCAATCGCTGCGGTTGCCCTCTTGCA TATGCTGACACTCAACAATA
Product: branched-chain amino acid ABC transporter periplasmic component-like protein
Products: NA
Alternate protein names: Fis Family Transcriptional Regulator; Twin-Arginine Translocation Pathway Signal; Branched-Chain Amino Acid Transporter; Lipoprotein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MHRWKRTFGWWMVMALVATMLAACGGGGTGGGGGASSEPIKIGAIFDLTGATADVGTPYARGQIAFIDWKNEQGGINGRR LQLVSEDYAYQVPRAEELYTQFVTQDKVLVFSGWGTGDTEALRPKITEDKIPFISASYSATLANPAETPYNFLVAPTYSD QLIIAMKWAIDDWKAKGNSGMPKFAYLINDSPFGRSPLADGTAFATSQGIDTPLEVPSPRGATDLTPQLTQIRDYGANYI FLQNVSSPAALAIKNAKSLGYDVQFVCLNWCANEILIKQAGADAEGVVGVVPFNHEAEGGKIALDYARQKNIDYGGADST FVQGWTALSILVAGIERTLADGKELTGENIKNTLETMGAIDTKGVTLPVQFSSTDHAGVKSTRMFRVENGRWVAITDFIS AR
Sequences:
>Translated_402_residues MHRWKRTFGWWMVMALVATMLAACGGGGTGGGGGASSEPIKIGAIFDLTGATADVGTPYARGQIAFIDWKNEQGGINGRR LQLVSEDYAYQVPRAEELYTQFVTQDKVLVFSGWGTGDTEALRPKITEDKIPFISASYSATLANPAETPYNFLVAPTYSD QLIIAMKWAIDDWKAKGNSGMPKFAYLINDSPFGRSPLADGTAFATSQGIDTPLEVPSPRGATDLTPQLTQIRDYGANYI FLQNVSSPAALAIKNAKSLGYDVQFVCLNWCANEILIKQAGADAEGVVGVVPFNHEAEGGKIALDYARQKNIDYGGADST FVQGWTALSILVAGIERTLADGKELTGENIKNTLETMGAIDTKGVTLPVQFSSTDHAGVKSTRMFRVENGRWVAITDFIS AR >Mature_402_residues MHRWKRTFGWWMVMALVATMLAACGGGGTGGGGGASSEPIKIGAIFDLTGATADVGTPYARGQIAFIDWKNEQGGINGRR LQLVSEDYAYQVPRAEELYTQFVTQDKVLVFSGWGTGDTEALRPKITEDKIPFISASYSATLANPAETPYNFLVAPTYSD QLIIAMKWAIDDWKAKGNSGMPKFAYLINDSPFGRSPLADGTAFATSQGIDTPLEVPSPRGATDLTPQLTQIRDYGANYI FLQNVSSPAALAIKNAKSLGYDVQFVCLNWCANEILIKQAGADAEGVVGVVPFNHEAEGGKIALDYARQKNIDYGGADST FVQGWTALSILVAGIERTLADGKELTGENIKNTLETMGAIDTKGVTLPVQFSSTDHAGVKSTRMFRVENGRWVAITDFIS AR
Specific function: Unknown
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43294; Mature: 43294
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRWKRTFGWWMVMALVATMLAACGGGGTGGGGGASSEPIKIGAIFDLTGATADVGTPYA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC RGQIAFIDWKNEQGGINGRRLQLVSEDYAYQVPRAEELYTQFVTQDKVLVFSGWGTGDTE CCEEEEEEECCCCCCCCCEEEEEEECCCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCH ALRPKITEDKIPFISASYSATLANPAETPYNFLVAPTYSDQLIIAMKWAIDDWKAKGNSG HHCCCCCCCCCCEEECCCCEEECCCCCCCCEEEEECCCCCCEEEEEEEECCHHHCCCCCC MPKFAYLINDSPFGRSPLADGTAFATSQGIDTPLEVPSPRGATDLTPQLTQIRDYGANYI CCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE FLQNVSSPAALAIKNAKSLGYDVQFVCLNWCANEILIKQAGADAEGVVGVVPFNHEAEGG EEECCCCCCEEEEECHHHCCCCEEEEEEHHHHCEEEEEECCCCCCCEEEEEECCCCCCCC KIALDYARQKNIDYGGADSTFVQGWTALSILVAGIERTLADGKELTGENIKNTLETMGAI EEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCC DTKGVTLPVQFSSTDHAGVKSTRMFRVENGRWVAITDFISAR CCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCC >Mature Secondary Structure MHRWKRTFGWWMVMALVATMLAACGGGGTGGGGGASSEPIKIGAIFDLTGATADVGTPYA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC RGQIAFIDWKNEQGGINGRRLQLVSEDYAYQVPRAEELYTQFVTQDKVLVFSGWGTGDTE CCEEEEEEECCCCCCCCCEEEEEEECCCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCH ALRPKITEDKIPFISASYSATLANPAETPYNFLVAPTYSDQLIIAMKWAIDDWKAKGNSG HHCCCCCCCCCCEEECCCCEEECCCCCCCCEEEEECCCCCCEEEEEEEECCHHHCCCCCC MPKFAYLINDSPFGRSPLADGTAFATSQGIDTPLEVPSPRGATDLTPQLTQIRDYGANYI CCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEE FLQNVSSPAALAIKNAKSLGYDVQFVCLNWCANEILIKQAGADAEGVVGVVPFNHEAEGG EEECCCCCCEEEEECHHHCCCCEEEEEEHHHHCEEEEEECCCCCCCEEEEEECCCCCCCC KIALDYARQKNIDYGGADSTFVQGWTALSILVAGIERTLADGKELTGENIKNTLETMGAI EEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHCCC DTKGVTLPVQFSSTDHAGVKSTRMFRVENGRWVAITDFISAR CCCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA