Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is paaK [H]

Identifier: 222524458

GI number: 222524458

Start: 1502025

End: 1503245

Strand: Reverse

Name: paaK [H]

Synonym: Chy400_1182

Alternate gene names: 222524458

Gene position: 1503245-1502025 (Counterclockwise)

Preceding gene: 222524459

Following gene: 222524457

Centisome position: 28.53

GC content: 58.07

Gene sequence:

>1221_bases
ATGAATATTGAGGCATTTTACGCCAGTTTTGATCAACGAGTGCGTGAGATTGTTGCTTTCGGCTATGAGCATTCGCCGGC
GTTTCGCCAGCGTATGGACTCGGCCGGCTTGACACCCTCTGATATTCAGACCACCGCCGATTTGAGCCGGCTGCCGATAT
TGCGCAAAGAACAACTGGTGGAATTGCAACGTCAAGGGCCACAGTTAGGTGGCATGCTCACGGTGCCCCTATCACGGCTG
CGCCGCATTTTTCAATCTCCTGGCCCAATCTACGATCCTGAGTCTGATGAACCAGACCCGTGGCGCTGGGCACCGGCGTT
TCGGGCCGCCGGTTTTGGCCCTGATGATATTGTGATTAACTGTTTTGGCTATCACCTGACGCCTGCCGGTGTGATGTTTG
AAGAGGGTGCGCGTGCGGTTGGTTGTGCAGTCATTCCAGCCGGGGTTGGTAATCAGGCTCAGCAAATCGAGGTGATGGCC
CAGCTCGGTGTGACCGCCTACGCCGGCCTGCCGAGCTATCTGAAAACCTTGCTCGAACGAGCAGTTGAGGCAGGTCATGA
TCCGCGCACCTGGCCGCTGAACAAAGCCTTTGTCGCTGCCGAACCGTTACCGCCATCACTGCGGGCGTTGTTTGAAGAGC
AGTACGGTATTCTGGTGTATGACGGTTACGGGACTGCCGAGACAGGAAACCTCGGCTACAACGGCCCAGAGCGGCAAGGC
TGGCACCTGCCTGAGGATGCTCTGGTGCAGATTTGCGACCTGAATACCGGTGAACCGGTACCGCCTGGGCAGACTGGTGA
AGTTGTGGTAACGCTCTTCCGCCGCGACTACATCCTGATCCGCTTTGCGGTTGGCGACCTCTCTGCGTTGATGGAGCCAA
CAACTGCAACCGTCATTCAAACCCCGCGCCTGGTAGGGTGGCTCGGTCGGAGTGGAGAGAGTGTCAAGGTGCGAGGGTTG
TTTGTCCATCCCCGGCATATTGCCGAGGCGATGCGGCGTATGACCGGCTTGCAGGCGTATCAGGCGGTTGTGGTGCGTGA
AAACCACCGCGACGAGCTGATCTGTCGGCTTGTGCCGACTGCCGATGCCGATCCTGCACACCTTCGTGATAGTGCCGCGC
AGGCGCTCCACGAAGCGCTGAAACTGCATTGTCGGGTAGAGCTGGTTAGCGATCTGCCAGCCGATGCCAAACCGTTTGTC
GATCTGCGCACCTGGGACTAA

Upstream 100 bases:

>100_bases
CTTAAACGAGATTGGTAGTCGCAAGAGTTATCGTGACGTCAAACACTACAAGCGCCGCAAGCGCTGGCTCTCCTGATCGG
GTTATCTATAAGAGGATGGT

Downstream 100 bases:

>100_bases
TCCTGGCCGGGCGGTCACGACCTACCGCCAGGCGGGTGGTGCCGTGAGGCGGGCTGAAGCCCTACCTGACGACGTGGCAG
TCCTGGTGGGGCTACGTATC

Product: coenzyme F390 synthetase-like protein

Products: NA

Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNIEAFYASFDQRVREIVAFGYEHSPAFRQRMDSAGLTPSDIQTTADLSRLPILRKEQLVELQRQGPQLGGMLTVPLSRL
RRIFQSPGPIYDPESDEPDPWRWAPAFRAAGFGPDDIVINCFGYHLTPAGVMFEEGARAVGCAVIPAGVGNQAQQIEVMA
QLGVTAYAGLPSYLKTLLERAVEAGHDPRTWPLNKAFVAAEPLPPSLRALFEEQYGILVYDGYGTAETGNLGYNGPERQG
WHLPEDALVQICDLNTGEPVPPGQTGEVVVTLFRRDYILIRFAVGDLSALMEPTTATVIQTPRLVGWLGRSGESVKVRGL
FVHPRHIAEAMRRMTGLQAYQAVVVRENHRDELICRLVPTADADPAHLRDSAAQALHEALKLHCRVELVSDLPADAKPFV
DLRTWD

Sequences:

>Translated_406_residues
MNIEAFYASFDQRVREIVAFGYEHSPAFRQRMDSAGLTPSDIQTTADLSRLPILRKEQLVELQRQGPQLGGMLTVPLSRL
RRIFQSPGPIYDPESDEPDPWRWAPAFRAAGFGPDDIVINCFGYHLTPAGVMFEEGARAVGCAVIPAGVGNQAQQIEVMA
QLGVTAYAGLPSYLKTLLERAVEAGHDPRTWPLNKAFVAAEPLPPSLRALFEEQYGILVYDGYGTAETGNLGYNGPERQG
WHLPEDALVQICDLNTGEPVPPGQTGEVVVTLFRRDYILIRFAVGDLSALMEPTTATVIQTPRLVGWLGRSGESVKVRGL
FVHPRHIAEAMRRMTGLQAYQAVVVRENHRDELICRLVPTADADPAHLRDSAAQALHEALKLHCRVELVSDLPADAKPFV
DLRTWD
>Mature_406_residues
MNIEAFYASFDQRVREIVAFGYEHSPAFRQRMDSAGLTPSDIQTTADLSRLPILRKEQLVELQRQGPQLGGMLTVPLSRL
RRIFQSPGPIYDPESDEPDPWRWAPAFRAAGFGPDDIVINCFGYHLTPAGVMFEEGARAVGCAVIPAGVGNQAQQIEVMA
QLGVTAYAGLPSYLKTLLERAVEAGHDPRTWPLNKAFVAAEPLPPSLRALFEEQYGILVYDGYGTAETGNLGYNGPERQG
WHLPEDALVQICDLNTGEPVPPGQTGEVVVTLFRRDYILIRFAVGDLSALMEPTTATVIQTPRLVGWLGRSGESVKVRGL
FVHPRHIAEAMRRMTGLQAYQAVVVRENHRDELICRLVPTADADPAHLRDSAAQALHEALKLHCRVELVSDLPADAKPFV
DLRTWD

Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]

COG id: COG1541

COG function: function code H; Coenzyme F390 synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787664, Length=422, Percent_Identity=26.0663507109005, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000873
- InterPro:   IPR011880 [H]

Pfam domain/function: PF00501 AMP-binding [H]

EC number: =6.2.1.30 [H]

Molecular weight: Translated: 44838; Mature: 44838

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEAFYASFDQRVREIVAFGYEHSPAFRQRMDSAGLTPSDIQTTADLSRLPILRKEQLV
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
ELQRQGPQLGGMLTVPLSRLRRIFQSPGPIYDPESDEPDPWRWAPAFRAAGFGPDDIVIN
HHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEE
CFGYHLTPAGVMFEEGARAVGCAVIPAGVGNQAQQIEVMAQLGVTAYAGLPSYLKTLLER
EECCCCCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
AVEAGHDPRTWPLNKAFVAAEPLPPSLRALFEEQYGILVYDGYGTAETGNLGYNGPERQG
HHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
WHLPEDALVQICDLNTGEPVPPGQTGEVVVTLFRRDYILIRFAVGDLSALMEPTTATVIQ
CCCCHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHCCCHHHEEC
TPRLVGWLGRSGESVKVRGLFVHPRHIAEAMRRMTGLQAYQAVVVRENHRDELICRLVPT
CCHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECC
ADADPAHLRDSAAQALHEALKLHCRVELVSDLPADAKPFVDLRTWD
CCCCHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCEEEECCC
>Mature Secondary Structure
MNIEAFYASFDQRVREIVAFGYEHSPAFRQRMDSAGLTPSDIQTTADLSRLPILRKEQLV
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
ELQRQGPQLGGMLTVPLSRLRRIFQSPGPIYDPESDEPDPWRWAPAFRAAGFGPDDIVIN
HHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEE
CFGYHLTPAGVMFEEGARAVGCAVIPAGVGNQAQQIEVMAQLGVTAYAGLPSYLKTLLER
EECCCCCCCCHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
AVEAGHDPRTWPLNKAFVAAEPLPPSLRALFEEQYGILVYDGYGTAETGNLGYNGPERQG
HHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCC
WHLPEDALVQICDLNTGEPVPPGQTGEVVVTLFRRDYILIRFAVGDLSALMEPTTATVIQ
CCCCHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHCCCHHHEEC
TPRLVGWLGRSGESVKVRGLFVHPRHIAEAMRRMTGLQAYQAVVVRENHRDELICRLVPT
CCHHHHHHCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECC
ADADPAHLRDSAAQALHEALKLHCRVELVSDLPADAKPFVDLRTWD
CCCCHHHHHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]