| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is bglX [H]
Identifier: 222524453
GI number: 222524453
Start: 1494373
End: 1496232
Strand: Reverse
Name: bglX [H]
Synonym: Chy400_1177
Alternate gene names: 222524453
Gene position: 1496232-1494373 (Counterclockwise)
Preceding gene: 222524454
Following gene: 222524452
Centisome position: 28.4
GC content: 59.03
Gene sequence:
>1860_bases ATGCGTTTCCATTCAGTGCTTGTGATCGTGCTACTGCCAATCCTTATCGCTGCCTGTGGTCGGACGCCGGTAAGTTCGCC GCCACCAACGGCCACGGTGATCACCTACCGCGATCCGTCGGCGCCAATTGCTGAACGGGTGAACGATCTGCTCCAACGCA TGACCCTGGCCGAGAAGATCGGGCAGATGACGCTGATCGAGAAGAATAGTCTGACGCCCGATCTGGTGCGCGATCTGGCT ATTGGTGGAGTGCTGAGCGGTGGTGGCGGCTATCCTCAAGCAGAGAACTCGCCGGCAGCCTGGGCGGCGATGGTCAATGA ATTTCAGCAGGCGGCGCTCAGTACGCGCCTGGGTATTCCGCTTATCTACGGTGCTGATGGGGTGCATGGGCACAATAATC TCTACGGGGCGGTGATCTTTCCGCATAACATTGGGCTGGGCGCGGCCAACAATCCGCAGCTTATGGAACAGATTGGCCGG GCGACCGCGCTGGAGATGGCGGCAACCGGGGTATTTTGGAATTATGCGCCGGCAGTGATGGTGCCGCTTGATGTGCGTTG GGGGCGCACCTATGAAGGCTACGCCGAGCGTCCAGATCACGTTGCTGCGCTGGCCAGTGCGTTTCTGCGTGGCTTGCAGG CACCTGACATCGCAGCCCCAAATCGTGTGATCGGTACCCCGAAGCACTTCCTCGGTGATGGCGGTACCGCCTGGGGATCG TCTACAACTGAGAATTATAAACTTGACCAGGGAGAAACCTTCGGCGACGAAGCCTTTCTACGAGCCGTCCATCTCCCACC CTATCAGGCGCTGATTGCAGAAGGTGCCCAGACAATTATGGCCTCGTATTCGAGCTGGAATGGGCAGAAGATGCACGCCA GCTCCTATTGGCTGACCGACGTGCTCAAACGGGAACTTGGCTTTGCCGGTTTTGTGGTTTCTGATTGGGCGGCTATCGAT CAGATCAGCCCTGATTACGATCAGGCAGTTATTACAGCGATCAATGCCGGCATCGATATGAATATGGTGCCCTACGATGC CCAACGCTTTATCGACTCGCTGACACGAGCAGTGGAACGTGGGGCCGTCAGCGAAGAGCGCATTGATGACGCAGTACGCC GCATTCTGACGGTCAAATTCGCGATGGGTCTGTTTGAACAGCCATTCGCGCATACAGCGTTGTCCGATCAGATCGGGAGT GCTCAGCATCGTCAACTGGCCCGGACTGCGGTCGCGCAGTCGCTAGTGCTGCTGAAGAATGACGCCAATCTGCTTCCGCT GCCAAAGGATATTGGTCATCTCTATATCGGCGGTCAGGCAGCCCACGATCTCGGCATCCAGGCCGGGGGCTGGACAATCG AATGGCAGGGGCGTACCGGCCCGATTATTCCGGGTACAACCATTCTGGAAGGCATTCAGGCCGCGGTATCGCCACAAACG GTCGTTGAATATAACCAACACGGTCGCTTCACCGGTGATCCGGGTGCAGCCGACGCAGTTTGCATCGCTGTCGTTGGTGA ATTGCCATACGCTGAAGGGCGGGGCGATAGCGCCAGCCTCAGTCTGCCCCCTGCCGAGAACCGTGTGCTACGGCGCATGG AAGAAGCCTGTGTCCGCCTGGTCGTGGTACTGGTCGCCGGACGCCCACTGCTGGTGACCGACGATCTGCCGAAGTGGGAT GCGCTGGTGATGGCATGGCTCCCCGGTAGCGAAGGGGCCGGAGTCGCCGATGTGCTCTTTGGCGATCAGCCGTTTCGTGG TCGCTTGCCGGTTACGTGGCCGCGCAGCCTTGATCAGTTGCCGGTGGGAAGCGGTGATGGGCAGCCGCTCTTTCCCTACG GTTTCGGATTGACGCCCTGA
Upstream 100 bases:
>100_bases GCAGCGTCGCTGATTTCGGCGGTTATTCCGATTATCGTCTTCTTCTTCGCCCAACGCATCTTCCTTGAAGGTGTGGTGAT TACCAATTTTGAGAAGTAGT
Downstream 100 bases:
>100_bases CCGGCGATGTTGCCCTCTACTGATAACGAGCCGGTCTTTATGTGAAACGTTGGTGGTCTGGAAAGGTTGTAGACCGTGCA GACATTATTGTCACCCATGA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MRFHSVLVIVLLPILIAACGRTPVSSPPPTATVITYRDPSAPIAERVNDLLQRMTLAEKIGQMTLIEKNSLTPDLVRDLA IGGVLSGGGGYPQAENSPAAWAAMVNEFQQAALSTRLGIPLIYGADGVHGHNNLYGAVIFPHNIGLGAANNPQLMEQIGR ATALEMAATGVFWNYAPAVMVPLDVRWGRTYEGYAERPDHVAALASAFLRGLQAPDIAAPNRVIGTPKHFLGDGGTAWGS STTENYKLDQGETFGDEAFLRAVHLPPYQALIAEGAQTIMASYSSWNGQKMHASSYWLTDVLKRELGFAGFVVSDWAAID QISPDYDQAVITAINAGIDMNMVPYDAQRFIDSLTRAVERGAVSEERIDDAVRRILTVKFAMGLFEQPFAHTALSDQIGS AQHRQLARTAVAQSLVLLKNDANLLPLPKDIGHLYIGGQAAHDLGIQAGGWTIEWQGRTGPIIPGTTILEGIQAAVSPQT VVEYNQHGRFTGDPGAADAVCIAVVGELPYAEGRGDSASLSLPPAENRVLRRMEEACVRLVVVLVAGRPLLVTDDLPKWD ALVMAWLPGSEGAGVADVLFGDQPFRGRLPVTWPRSLDQLPVGSGDGQPLFPYGFGLTP
Sequences:
>Translated_619_residues MRFHSVLVIVLLPILIAACGRTPVSSPPPTATVITYRDPSAPIAERVNDLLQRMTLAEKIGQMTLIEKNSLTPDLVRDLA IGGVLSGGGGYPQAENSPAAWAAMVNEFQQAALSTRLGIPLIYGADGVHGHNNLYGAVIFPHNIGLGAANNPQLMEQIGR ATALEMAATGVFWNYAPAVMVPLDVRWGRTYEGYAERPDHVAALASAFLRGLQAPDIAAPNRVIGTPKHFLGDGGTAWGS STTENYKLDQGETFGDEAFLRAVHLPPYQALIAEGAQTIMASYSSWNGQKMHASSYWLTDVLKRELGFAGFVVSDWAAID QISPDYDQAVITAINAGIDMNMVPYDAQRFIDSLTRAVERGAVSEERIDDAVRRILTVKFAMGLFEQPFAHTALSDQIGS AQHRQLARTAVAQSLVLLKNDANLLPLPKDIGHLYIGGQAAHDLGIQAGGWTIEWQGRTGPIIPGTTILEGIQAAVSPQT VVEYNQHGRFTGDPGAADAVCIAVVGELPYAEGRGDSASLSLPPAENRVLRRMEEACVRLVVVLVAGRPLLVTDDLPKWD ALVMAWLPGSEGAGVADVLFGDQPFRGRLPVTWPRSLDQLPVGSGDGQPLFPYGFGLTP >Mature_619_residues MRFHSVLVIVLLPILIAACGRTPVSSPPPTATVITYRDPSAPIAERVNDLLQRMTLAEKIGQMTLIEKNSLTPDLVRDLA IGGVLSGGGGYPQAENSPAAWAAMVNEFQQAALSTRLGIPLIYGADGVHGHNNLYGAVIFPHNIGLGAANNPQLMEQIGR ATALEMAATGVFWNYAPAVMVPLDVRWGRTYEGYAERPDHVAALASAFLRGLQAPDIAAPNRVIGTPKHFLGDGGTAWGS STTENYKLDQGETFGDEAFLRAVHLPPYQALIAEGAQTIMASYSSWNGQKMHASSYWLTDVLKRELGFAGFVVSDWAAID QISPDYDQAVITAINAGIDMNMVPYDAQRFIDSLTRAVERGAVSEERIDDAVRRILTVKFAMGLFEQPFAHTALSDQIGS AQHRQLARTAVAQSLVLLKNDANLLPLPKDIGHLYIGGQAAHDLGIQAGGWTIEWQGRTGPIIPGTTILEGIQAAVSPQT VVEYNQHGRFTGDPGAADAVCIAVVGELPYAEGRGDSASLSLPPAENRVLRRMEEACVRLVVVLVAGRPLLVTDDLPKWD ALVMAWLPGSEGAGVADVLFGDQPFRGRLPVTWPRSLDQLPVGSGDGQPLFPYGFGLTP
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=646, Percent_Identity=28.9473684210526, Blast_Score=234, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 66341; Mature: 66341
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFHSVLVIVLLPILIAACGRTPVSSPPPTATVITYRDPSAPIAERVNDLLQRMTLAEKI CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH GQMTLIEKNSLTPDLVRDLAIGGVLSGGGGYPQAENSPAAWAAMVNEFQQAALSTRLGIP CCEEEEECCCCCHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE LIYGADGVHGHNNLYGAVIFPHNIGLGAANNPQLMEQIGRATALEMAATGVFWNYAPAVM EEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEE VPLDVRWGRTYEGYAERPDHVAALASAFLRGLQAPDIAAPNRVIGTPKHFLGDGGTAWGS EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC STTENYKLDQGETFGDEAFLRAVHLPPYQALIAEGAQTIMASYSSWNGQKMHASSYWLTD CCCCCEECCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHH VLKRELGFAGFVVSDWAAIDQISPDYDQAVITAINAGIDMNMVPYDAQRFIDSLTRAVER HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GAVSEERIDDAVRRILTVKFAMGLFEQPFAHTALSDQIGSAQHRQLARTAVAQSLVLLKN CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEC DANLLPLPKDIGHLYIGGQAAHDLGIQAGGWTIEWQGRTGPIIPGTTILEGIQAAVSPQT CCCCCCCCHHCCEEEECCCHHHHCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHH VVEYNQHGRFTGDPGAADAVCIAVVGELPYAEGRGDSASLSLPPAENRVLRRMEEACVRL HEEHHCCCCCCCCCCCCHHEEEEEHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH VVVLVAGRPLLVTDDLPKWDALVMAWLPGSEGAGVADVLFGDQPFRGRLPVTWPRSLDQL HHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC PVGSGDGQPLFPYGFGLTP CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRFHSVLVIVLLPILIAACGRTPVSSPPPTATVITYRDPSAPIAERVNDLLQRMTLAEKI CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH GQMTLIEKNSLTPDLVRDLAIGGVLSGGGGYPQAENSPAAWAAMVNEFQQAALSTRLGIP CCEEEEECCCCCHHHHHHHHHCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE LIYGADGVHGHNNLYGAVIFPHNIGLGAANNPQLMEQIGRATALEMAATGVFWNYAPAVM EEECCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEE VPLDVRWGRTYEGYAERPDHVAALASAFLRGLQAPDIAAPNRVIGTPKHFLGDGGTAWGS EEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCC STTENYKLDQGETFGDEAFLRAVHLPPYQALIAEGAQTIMASYSSWNGQKMHASSYWLTD CCCCCEECCCCCCCCCHHHHHEECCCHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHH VLKRELGFAGFVVSDWAAIDQISPDYDQAVITAINAGIDMNMVPYDAQRFIDSLTRAVER HHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GAVSEERIDDAVRRILTVKFAMGLFEQPFAHTALSDQIGSAQHRQLARTAVAQSLVLLKN CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEC DANLLPLPKDIGHLYIGGQAAHDLGIQAGGWTIEWQGRTGPIIPGTTILEGIQAAVSPQT CCCCCCCCHHCCEEEECCCHHHHCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCHH VVEYNQHGRFTGDPGAADAVCIAVVGELPYAEGRGDSASLSLPPAENRVLRRMEEACVRL HEEHHCCCCCCCCCCCCHHEEEEEHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH VVVLVAGRPLLVTDDLPKWDALVMAWLPGSEGAGVADVLFGDQPFRGRLPVTWPRSLDQL HHHHHCCCCEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC PVGSGDGQPLFPYGFGLTP CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]