| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is bglA [H]
Identifier: 222524452
GI number: 222524452
Start: 1493452
End: 1494276
Strand: Reverse
Name: bglA [H]
Synonym: Chy400_1176
Alternate gene names: 222524452
Gene position: 1494276-1493452 (Counterclockwise)
Preceding gene: 222524453
Following gene: 222524451
Centisome position: 28.36
GC content: 53.94
Gene sequence:
>825_bases ATGATCAGGCGACAGATAGTGTGGCTGGGAATAGTGTGTCTGTTCCTGGTTGGATGCTCTGCTATGCCGACGACGCCTGT GATCGGTGAACCGACCCCAACCCCCTCACCGTGGACGCTCGTCTGGAGTGATGAGTTTGAGAGCGAGACGCTCAACCCGC AGAACTGGTTGTTCGACAAAGGGGCCGGGGGATGGGGGAATAACGAATTGCAGTACTACAGCAATCGGCCAGAGAATATC CGTATTGAAGATGGTGTCTTGATTATCGAAGCCCGTAATGAAGAGTACATGGCCTGGGAATATACTTCTGCCCGCATCAA GACCCACTATCTGCAGAGCTGGACGTATGGTCGGATCGAGGCGCGCATGAAGCTCCCGGTTGGTGGTAAAGGCATCTGGC CGGCCTTCTGGATGTTAGGCGAAAACATCGCTACTGCGCGCTGGCCCAACTGTGGCGAGATCGACATTATGGAAAATATC GGTAATCCAACCGTTGTTTATGGTTCGGTACACGGCCCAGGCTATTCTGGTGGAAATGCGATCACAAAGTCATTTGTCAG TGCAGTGGATCTGTCGGCTGATTTTCACATCTACGCTGTCGAATGGGAGGCCGACGAGATCCGCTGGTACGTCGATGATC AACTCTACCACACCCTGCGTCGTGAACAGGTACCGGGTGAATGGGTGTTTGATCATCCGTTCTTTCTCATTCTCAATCTA GCCGTCGGCGGGAACTGGCCGGGGTACCCCGACGAAACAACCGTCTTTCCCCAGCAGCTCCTGGTTGATTATGTGCGTGT GTATCAAGCTGGTGCGGCCTCGTGA
Upstream 100 bases:
>100_bases CTGACCGGCGATGTTGCCCTCTACTGATAACGAGCCGGTCTTTATGTGAAACGTTGGTGGTCTGGAAAGGTTGTAGACCG TGCAGACATTATTGTCACCC
Downstream 100 bases:
>100_bases GCCGGCCTATTCAGAGGAAGGTTATGACTACACTCGTTGATCCAGAAACACTGCTTGCTCACCTGACTCTTGACGAAAAG ATTGCCCTGCTTGCCGGTGC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MIRRQIVWLGIVCLFLVGCSAMPTTPVIGEPTPTPSPWTLVWSDEFESETLNPQNWLFDKGAGGWGNNELQYYSNRPENI RIEDGVLIIEARNEEYMAWEYTSARIKTHYLQSWTYGRIEARMKLPVGGKGIWPAFWMLGENIATARWPNCGEIDIMENI GNPTVVYGSVHGPGYSGGNAITKSFVSAVDLSADFHIYAVEWEADEIRWYVDDQLYHTLRREQVPGEWVFDHPFFLILNL AVGGNWPGYPDETTVFPQQLLVDYVRVYQAGAAS
Sequences:
>Translated_274_residues MIRRQIVWLGIVCLFLVGCSAMPTTPVIGEPTPTPSPWTLVWSDEFESETLNPQNWLFDKGAGGWGNNELQYYSNRPENI RIEDGVLIIEARNEEYMAWEYTSARIKTHYLQSWTYGRIEARMKLPVGGKGIWPAFWMLGENIATARWPNCGEIDIMENI GNPTVVYGSVHGPGYSGGNAITKSFVSAVDLSADFHIYAVEWEADEIRWYVDDQLYHTLRREQVPGEWVFDHPFFLILNL AVGGNWPGYPDETTVFPQQLLVDYVRVYQAGAAS >Mature_274_residues MIRRQIVWLGIVCLFLVGCSAMPTTPVIGEPTPTPSPWTLVWSDEFESETLNPQNWLFDKGAGGWGNNELQYYSNRPENI RIEDGVLIIEARNEEYMAWEYTSARIKTHYLQSWTYGRIEARMKLPVGGKGIWPAFWMLGENIATARWPNCGEIDIMENI GNPTVVYGSVHGPGYSGGNAITKSFVSAVDLSADFHIYAVEWEADEIRWYVDDQLYHTLRREQVPGEWVFDHPFFLILNL AVGGNWPGYPDETTVFPQQLLVDYVRVYQAGAAS
Specific function: Shows activity on lichenan, beta-glucan and laminarin but not on CMC cellulose or xylan [H]
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 31162; Mature: 31162
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01034 GLYCOSYL_HYDROL_F16
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRQIVWLGIVCLFLVGCSAMPTTPVIGEPTPTPSPWTLVWSDEFESETLNPQNWLFDK CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEC GAGGWGNNELQYYSNRPENIRIEDGVLIIEARNEEYMAWEYTSARIKTHYLQSWTYGRIE CCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCEEEEEECCHHEEEEHHHCCCCEEEE ARMKLPVGGKGIWPAFWMLGENIATARWPNCGEIDIMENIGNPTVVYGSVHGPGYSGGNA EEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCEEEEECCCCCCCCCCHH ITKSFVSAVDLSADFHIYAVEWEADEIRWYVDDQLYHTLRREQVPGEWVFDHPFFLILNL HHHHHHHHHCCCCCEEEEEEEEECCCEEEEECHHHHHHHHHHCCCCCEEECCCEEEEEEE AVGGNWPGYPDETTVFPQQLLVDYVRVYQAGAAS EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIRRQIVWLGIVCLFLVGCSAMPTTPVIGEPTPTPSPWTLVWSDEFESETLNPQNWLFDK CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEC GAGGWGNNELQYYSNRPENIRIEDGVLIIEARNEEYMAWEYTSARIKTHYLQSWTYGRIE CCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCEEEEEECCHHEEEEHHHCCCCEEEE ARMKLPVGGKGIWPAFWMLGENIATARWPNCGEIDIMENIGNPTVVYGSVHGPGYSGGNA EEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEHHHCCCCCEEEEECCCCCCCCCCHH ITKSFVSAVDLSADFHIYAVEWEADEIRWYVDDQLYHTLRREQVPGEWVFDHPFFLILNL HHHHHHHHHCCCCCEEEEEEEEECCCEEEEECHHHHHHHHHHCCCCCEEECCCEEEEEEE AVGGNWPGYPDETTVFPQQLLVDYVRVYQAGAAS EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7925416 [H]