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The map label for this gene is ydiF [H]

Identifier: 222524423

GI number: 222524423

Start: 1452774

End: 1454672

Strand: Reverse

Name: ydiF [H]

Synonym: Chy400_1147

Alternate gene names: 222524423

Gene position: 1454672-1452774 (Counterclockwise)

Preceding gene: 222524425

Following gene: 222524422

Centisome position: 27.61

GC content: 59.03

Gene sequence:

>1899_bases
ATGACCCTGCTAAACGCTCACAACCTCAGCAAATACTTTGGTGCTGAACTCATCTTTCACGATGTCAGCTTTCAAATCAG
CCGTGGCGAGAAGGTCGCGATTGTCGGTTTGAATGGCGCCGGCAAAAGTACCCTGTTGCGCATTATTGCCGGTCACGAGA
CTCCTGACAGCGGGAGCGTTCATCTCGCTCGCGGTACTCGTGTTGCCTATCTGGCGCAAGAGGCTCGCTTCAGCGGTGAT
CGAACACTCTGGCAAGAGATGGAGGCCGCCCTGGCTGAGATCAACGCCTGGCGCGCCGAACTACTCGTGCTTGAAACCAG
GCTGGCAGACACCACAGCGGATGATTGGGAAGCGGTGATGGAGCGCTACGGCGAGTTGAGTGCACGCTTCGAGCACGCCG
GCGGGTATGAGATAGAACATCGTATCAAGCGCACCCTCCACGGCCTCGGCTTTCAGCCGGAACAGTTCCATCAACCGCTG
CGCCAGTTCTCCGGTGGGCAGAAGACGCGCGCCGCACTGGCAGCCGCGCTGTTGAGTGACCCCGATCTGCTGTTGCTCGA
CGAGCCAACCAATCACCTCGATATGCAAGCCCTGGAGTGGCTCGAACAGTTTCTGCGGAATTGGGATGGCACCCTGATCG
TTGTTTCGCATGATCGCTACTTCCTTGACCGGGTGACCAAACGCACTCTGGAGCTGAGCTTCAATCGTCTGGAAGATTAT
CCCGGCAATTACGAGAAGTATCTGGCTTTGAAAGCCGAGCGCATGGAGCGGCGCCTCAAGGAGTATCAGGCGCAACAGGC
GTTTATTGCCCGCACCGAAGAGTTTATCCGGCGCTATCGGGCCGGGCAGCGCGCCCGTGAAGCGAAAGGGCGTGAGAAGC
GGCTGGAACGCTTGAAGCGAGAACAGATGCTTGAACGGCCAAAAGAGGCGGCTAAGCTGCGGGTAGCTCTCGATCAGCAG
TTGCGTTCGGGTGAACTGGTGTTGCGCCTCGATGGTCTGGTTGTCGGTTTTCCAGGGCAGCGTGGTGAAGGGCAGGCATT
GTTGAGGGCCGATGACCTGACGATTCGGCGTGGTGAACGGGTCGGCTTGCTCGGCCCTAATGGCTGTGGCAAGACGACTC
TGCTGCGGACACTCGTCGGTCAATTACCGGCACTGCAGGGTGTTGCCCGTTTCGGCCACGAAGTGCGCGTCGGCTACTAC
GCCCAGGGGCATGATGTTCTGGAATGGAACAACACTGTCCTCGAAGAAGTAGTACGGATCGCACCGGGTCTTGGGGAAGC
GGCAGCACGCAATCTGCTGGCCCGTTTTCTCTTTACGGGGGATGATGTCTTCAAGCGGATTGCCGATCTGAGTGGTGGCG
AGCGATCACGGGTAGCACTGGCCCAACTGACGCTGCTGCCCGGTAACTTTCTCCTGCTCGACGAACCGACCAACCACCTC
GACATTGATGCCCGTGAAGCGTTGGAAGCCGTCTTGAAGGAGTACACCGGGGCGATCTTGTTCGTCTCGCACGACCGCTA
CTTCATTGACGCACTGGCCGATAAACTCTGGATCGTCGATCAGGGACGGATTCGCGAATTCATCGGCAACTACAGCGAAT
ACATGGCGGCCCAGCAGGCACCAGCCCCTACAGCCACGACGCCAACCGCTGAAGTCAAAGCACCGGCGGCAAAGCCGGCC
CGTCCTGACGATGCAGAACGGGCGAAGCAGCGTCGGTTGGCCGCATTGGAAGCCGAAGTCACTGCACTTGAGCAGGATTT
GGCTCGCCTGAGCAGCGAACTCGATGCGGCGAGTCAGGCGTGCGATGTTGCCCGCCTGACGGCGCTGGGTGCTCAGTATG
CCGAACTGGAACAGTTGCTGGCAACCAAATACGCGCAGTGGGAACAACTGGCTGCCTGA

Upstream 100 bases:

>100_bases
CCGATAGACAACCGCCGGCACCCATGCTGTGAGTGTCGTTTGTACCCCAACCGGCGAAGCGTATTGTTTGAAGAAACACA
ACACCTGATCAACATAGACC

Downstream 100 bases:

>100_bases
CAGAGTCGTTCTGGTTGTTGAAGCCAACGCCCGGCAGTCATACCCGCAACTGAAGGCAATGAATTATCGCGCATACGCAT
CGATCTATCACGCTGCCGGC

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 631

Protein sequence:

>632_residues
MTLLNAHNLSKYFGAELIFHDVSFQISRGEKVAIVGLNGAGKSTLLRIIAGHETPDSGSVHLARGTRVAYLAQEARFSGD
RTLWQEMEAALAEINAWRAELLVLETRLADTTADDWEAVMERYGELSARFEHAGGYEIEHRIKRTLHGLGFQPEQFHQPL
RQFSGGQKTRAALAAALLSDPDLLLLDEPTNHLDMQALEWLEQFLRNWDGTLIVVSHDRYFLDRVTKRTLELSFNRLEDY
PGNYEKYLALKAERMERRLKEYQAQQAFIARTEEFIRRYRAGQRAREAKGREKRLERLKREQMLERPKEAAKLRVALDQQ
LRSGELVLRLDGLVVGFPGQRGEGQALLRADDLTIRRGERVGLLGPNGCGKTTLLRTLVGQLPALQGVARFGHEVRVGYY
AQGHDVLEWNNTVLEEVVRIAPGLGEAAARNLLARFLFTGDDVFKRIADLSGGERSRVALAQLTLLPGNFLLLDEPTNHL
DIDAREALEAVLKEYTGAILFVSHDRYFIDALADKLWIVDQGRIREFIGNYSEYMAAQQAPAPTATTPTAEVKAPAAKPA
RPDDAERAKQRRLAALEAEVTALEQDLARLSSELDAASQACDVARLTALGAQYAELEQLLATKYAQWEQLAA

Sequences:

>Translated_632_residues
MTLLNAHNLSKYFGAELIFHDVSFQISRGEKVAIVGLNGAGKSTLLRIIAGHETPDSGSVHLARGTRVAYLAQEARFSGD
RTLWQEMEAALAEINAWRAELLVLETRLADTTADDWEAVMERYGELSARFEHAGGYEIEHRIKRTLHGLGFQPEQFHQPL
RQFSGGQKTRAALAAALLSDPDLLLLDEPTNHLDMQALEWLEQFLRNWDGTLIVVSHDRYFLDRVTKRTLELSFNRLEDY
PGNYEKYLALKAERMERRLKEYQAQQAFIARTEEFIRRYRAGQRAREAKGREKRLERLKREQMLERPKEAAKLRVALDQQ
LRSGELVLRLDGLVVGFPGQRGEGQALLRADDLTIRRGERVGLLGPNGCGKTTLLRTLVGQLPALQGVARFGHEVRVGYY
AQGHDVLEWNNTVLEEVVRIAPGLGEAAARNLLARFLFTGDDVFKRIADLSGGERSRVALAQLTLLPGNFLLLDEPTNHL
DIDAREALEAVLKEYTGAILFVSHDRYFIDALADKLWIVDQGRIREFIGNYSEYMAAQQAPAPTATTPTAEVKAPAAKPA
RPDDAERAKQRRLAALEAEVTALEQDLARLSSELDAASQACDVARLTALGAQYAELEQLLATKYAQWEQLAA
>Mature_631_residues
TLLNAHNLSKYFGAELIFHDVSFQISRGEKVAIVGLNGAGKSTLLRIIAGHETPDSGSVHLARGTRVAYLAQEARFSGDR
TLWQEMEAALAEINAWRAELLVLETRLADTTADDWEAVMERYGELSARFEHAGGYEIEHRIKRTLHGLGFQPEQFHQPLR
QFSGGQKTRAALAAALLSDPDLLLLDEPTNHLDMQALEWLEQFLRNWDGTLIVVSHDRYFLDRVTKRTLELSFNRLEDYP
GNYEKYLALKAERMERRLKEYQAQQAFIARTEEFIRRYRAGQRAREAKGREKRLERLKREQMLERPKEAAKLRVALDQQL
RSGELVLRLDGLVVGFPGQRGEGQALLRADDLTIRRGERVGLLGPNGCGKTTLLRTLVGQLPALQGVARFGHEVRVGYYA
QGHDVLEWNNTVLEEVVRIAPGLGEAAARNLLARFLFTGDDVFKRIADLSGGERSRVALAQLTLLPGNFLLLDEPTNHLD
IDAREALEAVLKEYTGAILFVSHDRYFIDALADKLWIVDQGRIREFIGNYSEYMAAQQAPAPTATTPTAEVKAPAAKPAR
PDDAERAKQRRLAALEAEVTALEQDLARLSSELDAASQACDVARLTALGAQYAELEQLLATKYAQWEQLAA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=33.8289962825279, Blast_Score=283, Evalue=3e-76,
Organism=Homo sapiens, GI10947137, Length=538, Percent_Identity=31.9702602230483, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI27881506, Length=538, Percent_Identity=31.9702602230483, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI69354671, Length=531, Percent_Identity=32.5800376647834, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI10947135, Length=531, Percent_Identity=32.5800376647834, Blast_Score=233, Evalue=6e-61,
Organism=Escherichia coli, GI1787041, Length=556, Percent_Identity=33.273381294964, Blast_Score=324, Evalue=1e-89,
Organism=Escherichia coli, GI1789751, Length=584, Percent_Identity=33.5616438356164, Blast_Score=309, Evalue=3e-85,
Organism=Escherichia coli, GI2367384, Length=524, Percent_Identity=35.3053435114504, Blast_Score=288, Evalue=5e-79,
Organism=Escherichia coli, GI1787182, Length=655, Percent_Identity=32.3664122137405, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI1788506, Length=570, Percent_Identity=26.3157894736842, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI145693107, Length=612, Percent_Identity=23.202614379085, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786703, Length=246, Percent_Identity=32.520325203252, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787164, Length=220, Percent_Identity=32.7272727272727, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1788225, Length=214, Percent_Identity=32.2429906542056, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=30.6930693069307, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1789891, Length=243, Percent_Identity=25.5144032921811, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI48995001, Length=246, Percent_Identity=28.8617886178862, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI87081709, Length=195, Percent_Identity=28.7179487179487, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789962, Length=222, Percent_Identity=25.2252252252252, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=26.9767441860465, Blast_Score=70, Evalue=6e-13,
Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=32.3529411764706, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1790467, Length=203, Percent_Identity=30.0492610837438, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI48994883, Length=254, Percent_Identity=25.9842519685039, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1786698, Length=189, Percent_Identity=30.6878306878307, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788897, Length=213, Percent_Identity=27.6995305164319, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17553372, Length=531, Percent_Identity=33.1450094161959, Blast_Score=263, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=31.1111111111111, Blast_Score=243, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17559834, Length=540, Percent_Identity=29.4444444444444, Blast_Score=226, Evalue=3e-59,
Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=31.4814814814815, Blast_Score=270, Evalue=3e-73,
Organism=Saccharomyces cerevisiae, GI6320874, Length=535, Percent_Identity=31.588785046729, Blast_Score=230, Evalue=5e-61,
Organism=Saccharomyces cerevisiae, GI6324314, Length=392, Percent_Identity=25.2551020408163, Blast_Score=124, Evalue=6e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=24.8730964467005, Blast_Score=116, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6325030, Length=400, Percent_Identity=25, Blast_Score=114, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24666836, Length=537, Percent_Identity=34.6368715083799, Blast_Score=293, Evalue=3e-79,
Organism=Drosophila melanogaster, GI24642252, Length=531, Percent_Identity=31.2617702448211, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI18859989, Length=531, Percent_Identity=31.2617702448211, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24641342, Length=536, Percent_Identity=32.4626865671642, Blast_Score=256, Evalue=4e-68,
Organism=Drosophila melanogaster, GI28574259, Length=205, Percent_Identity=27.3170731707317, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 70897; Mature: 70766

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLNAHNLSKYFGAELIFHDVSFQISRGEKVAIVGLNGAGKSTLLRIIAGHETPDSGSV
CCCCCCCCHHHHHCHHHEEEECEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCE
HLARGTRVAYLAQEARFSGDRTLWQEMEAALAEINAWRAELLVLETRLADTTADDWEAVM
EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ERYGELSARFEHAGGYEIEHRIKRTLHGLGFQPEQFHQPLRQFSGGQKTRAALAAALLSD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDLLLLDEPTNHLDMQALEWLEQFLRNWDGTLIVVSHDRYFLDRVTKRTLELSFNRLEDY
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
PGNYEKYLALKAERMERRLKEYQAQQAFIARTEEFIRRYRAGQRAREAKGREKRLERLKR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH
EQMLERPKEAAKLRVALDQQLRSGELVLRLDGLVVGFPGQRGEGQALLRADDLTIRRGER
HHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCEEEEECCEEEECCCE
VGLLGPNGCGKTTLLRTLVGQLPALQGVARFGHEVRVGYYAQGHDVLEWNNTVLEEVVRI
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEECCCHHHHHHHHHH
APGLGEAAARNLLARFLFTGDDVFKRIADLSGGERSRVALAQLTLLPGNFLLLDEPTNHL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHEEEHHEEECCCCEEEEECCCCCC
DIDAREALEAVLKEYTGAILFVSHDRYFIDALADKLWIVDQGRIREFIGNYSEYMAAQQA
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCHHHHHHHCCHHHHHHHHCC
PAPTATTPTAEVKAPAAKPARPDDAERAKQRRLAALEAEVTALEQDLARLSSELDAASQA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CDVARLTALGAQYAELEQLLATKYAQWEQLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLLNAHNLSKYFGAELIFHDVSFQISRGEKVAIVGLNGAGKSTLLRIIAGHETPDSGSV
CCCCCCCHHHHHCHHHEEEECEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCCE
HLARGTRVAYLAQEARFSGDRTLWQEMEAALAEINAWRAELLVLETRLADTTADDWEAVM
EEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
ERYGELSARFEHAGGYEIEHRIKRTLHGLGFQPEQFHQPLRQFSGGQKTRAALAAALLSD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDLLLLDEPTNHLDMQALEWLEQFLRNWDGTLIVVSHDRYFLDRVTKRTLELSFNRLEDY
CCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCC
PGNYEKYLALKAERMERRLKEYQAQQAFIARTEEFIRRYRAGQRAREAKGREKRLERLKR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH
EQMLERPKEAAKLRVALDQQLRSGELVLRLDGLVVGFPGQRGEGQALLRADDLTIRRGER
HHHHHCCHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCEEEEECCEEEECCCE
VGLLGPNGCGKTTLLRTLVGQLPALQGVARFGHEVRVGYYAQGHDVLEWNNTVLEEVVRI
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEECCCHHHHHHHHHH
APGLGEAAARNLLARFLFTGDDVFKRIADLSGGERSRVALAQLTLLPGNFLLLDEPTNHL
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHEEEHHEEECCCCEEEEECCCCCC
DIDAREALEAVLKEYTGAILFVSHDRYFIDALADKLWIVDQGRIREFIGNYSEYMAAQQA
CCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHEEEECCHHHHHHHCCHHHHHHHHCC
PAPTATTPTAEVKAPAAKPARPDDAERAKQRRLAALEAEVTALEQDLARLSSELDAASQA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CDVARLTALGAQYAELEQLLATKYAQWEQLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]