| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524419
Identifier: 222524419
GI number: 222524419
Start: 1445249
End: 1445929
Strand: Direct
Name: 222524419
Synonym: Chy400_1143
Alternate gene names: NA
Gene position: 1445249-1445929 (Clockwise)
Preceding gene: 222524418
Following gene: 222524420
Centisome position: 27.43
GC content: 60.21
Gene sequence:
>681_bases ATGGTTTCTCGTCGTCGCCCCGGTGCGCCCGCCGATTTTGAAGAGATTCAGCCCAACCTGTTTCTCATCCACAATCCGGC ACTTGGCCCCGTGTTGCGCGGTGAAGGCGAACGGGAAGGGTTTCATTTTCGGCTGACCAGTTGGCGGCGGGAAGGTTTGC TTGCCCGCCTGGCGCAGCGTAGTTTCGTAACTCTGACGATTGCCGACCGGATTGCGGCGCTGCCGGCTCCGCCATCAGTA GTTCCCGGTAGACTGCGCACGATTCCGGTGCAGGAAAAGCAACAGTTTAGTATCCTCGATCTGGCTGCGCCCCATGGCTG GCGCACCATTCAACCAGCCGCCGACAACACCGTAACCCTCCCTGAAGGGCAGATTGTGCGCCGTCGGCGCGGGCGCGGCC CGGCAGACTATGTGCGGGTCACGGCAACCGGATGGCAGACCGTGCCTGATGATGAAGCGCTGTTAACGGCTTATGCGTTA TTAATGCCTGAGCCGCGGTTGACACTCTCGCCAATTGGCAGTGGCTGGCTGTTGCCCGAACTGCCACTGCCAGCGCCCTA TCGCCGGGTGCTGCATCAAATTGCTCAATCACATCCTGATGGCTGGTTCCTCGCCGATGCGTATGCCTGTGAGCTGGCTG AGCTGCTGTTACGCAAGCTGGGATTGACGTTGGTTCGTTGA
Upstream 100 bases:
>100_bases TGCCCCAACTCTCCAGCGCTTTGGGTTGTCGTGACATCCCGCGCTGCGTAACGCTGGGACAAGACACAGTTCCTGGTAGT GTTGATAGGTGTATTGCATT
Downstream 100 bases:
>100_bases CAGGGTTGACCTGGGTGACACCATCATCGACTGTGCGGGTAGCACATACCTGCGCCTGGCGATCTATATGCCATAAGTGC CTGCGTTCCCTATCCACGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVSRRRPGAPADFEEIQPNLFLIHNPALGPVLRGEGEREGFHFRLTSWRREGLLARLAQRSFVTLTIADRIAALPAPPSV VPGRLRTIPVQEKQQFSILDLAAPHGWRTIQPAADNTVTLPEGQIVRRRRGRGPADYVRVTATGWQTVPDDEALLTAYAL LMPEPRLTLSPIGSGWLLPELPLPAPYRRVLHQIAQSHPDGWFLADAYACELAELLLRKLGLTLVR
Sequences:
>Translated_226_residues MVSRRRPGAPADFEEIQPNLFLIHNPALGPVLRGEGEREGFHFRLTSWRREGLLARLAQRSFVTLTIADRIAALPAPPSV VPGRLRTIPVQEKQQFSILDLAAPHGWRTIQPAADNTVTLPEGQIVRRRRGRGPADYVRVTATGWQTVPDDEALLTAYAL LMPEPRLTLSPIGSGWLLPELPLPAPYRRVLHQIAQSHPDGWFLADAYACELAELLLRKLGLTLVR >Mature_226_residues MVSRRRPGAPADFEEIQPNLFLIHNPALGPVLRGEGEREGFHFRLTSWRREGLLARLAQRSFVTLTIADRIAALPAPPSV VPGRLRTIPVQEKQQFSILDLAAPHGWRTIQPAADNTVTLPEGQIVRRRRGRGPADYVRVTATGWQTVPDDEALLTAYAL LMPEPRLTLSPIGSGWLLPELPLPAPYRRVLHQIAQSHPDGWFLADAYACELAELLLRKLGLTLVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25201; Mature: 25201
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRRRPGAPADFEEIQPNLFLIHNPALGPVLRGEGEREGFHFRLTSWRREGLLARLAQR CCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC SFVTLTIADRIAALPAPPSVVPGRLRTIPVQEKQQFSILDLAAPHGWRTIQPAADNTVTL CEEEEEEHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEECCCCCCEEEC PEGQIVRRRRGRGPADYVRVTATGWQTVPDDEALLTAYALLMPEPRLTLSPIGSGWLLPE CCCHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC LPLPAPYRRVLHQIAQSHPDGWFLADAYACELAELLLRKLGLTLVR CCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCEECC >Mature Secondary Structure MVSRRRPGAPADFEEIQPNLFLIHNPALGPVLRGEGEREGFHFRLTSWRREGLLARLAQR CCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHC SFVTLTIADRIAALPAPPSVVPGRLRTIPVQEKQQFSILDLAAPHGWRTIQPAADNTVTL CEEEEEEHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCEEECCCCCCEEEC PEGQIVRRRRGRGPADYVRVTATGWQTVPDDEALLTAYALLMPEPRLTLSPIGSGWLLPE CCCHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCC LPLPAPYRRVLHQIAQSHPDGWFLADAYACELAELLLRKLGLTLVR CCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA