| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is catD [H]
Identifier: 222524378
GI number: 222524378
Start: 1395991
End: 1396791
Strand: Reverse
Name: catD [H]
Synonym: Chy400_1102
Alternate gene names: 222524378
Gene position: 1396791-1395991 (Counterclockwise)
Preceding gene: 222524379
Following gene: 222524373
Centisome position: 26.51
GC content: 60.92
Gene sequence:
>801_bases ATGCACGTGACCCTCCCCCACGGTGTGCAACTACGCTACGATGATGCAGGAAGTGGACAACCGGTCGTCTTGTTGCACGC CTTTCCGCTGAGTGCGGCACTATGGCGGGCGCAATTGAGTACATTGGGTGATCGCATGCGTATGATTGCCCCTGATCTAC GCGGGTTTGGCGGCTCGCCGGCGACACCGCTGCCACAGTCGCTCGATGACTATGCAACGGATGTCCTGGCATTACTCGAT ATCCTGAACATCGAACGGGCAGTGCTGGCCGGCTTGTCAATGGGAGGCTACATTGCCTTCGCTCTGCTGCTGCGGGCACC AGAGCGGATCAGCGGCCTGTTGCTGGCCGATACCCGGGCAACTGCCGATAGTGAGGAGACGCGGGCAGCACGGGCCGTTA ATGCCAGGATTGCGTTGGAAGAGGGAAGTGCGGCACTGGCCGGACGAATGTTACCCAATCTGGTAGCACCGGGGGCAAGT GAGGCGCTACGGGCCGAGCTGCTGAGTATCGCTGCGGCGAATCCACCAGAAGGGATTGCCGCGGCTCTCCACGCCATGGC GGCTCGCCCCGATTCGACGCCGCTGCTGGCCGAGATTCGGGTGCCGACAACTGTTGTCGTCGGTGCGGAAGATGCTCTCA CCCCCCCTGCTGAAGCGCAGGTGATGCACAATGCGATTGCCGATAGTCGTTTCGTCGTGATTCCACACGCCGGCCATCTC AGTGCGATTGAACGGCCAGCAGAGTTTAATCTGGCGCTGGTCGAACTGGTGATGCGGGTTGAGGCAGCATCCAGAACATG A
Upstream 100 bases:
>100_bases AGGTGTATCATGCAGTCATCCCGATGTCCGGCAACACGCTAACAGGCGTTTACCAAACGCATTGCACTGGTTGAATATCG GCTCAGAAACGGAGGTACCA
Downstream 100 bases:
>100_bases GGTACGGGTAGGGGCGAGGCATGCGGCGCCCCTACGGTATGTGCGCAAACAGGTCACGTCATACGGTAAGGCCCTGGCAG GAGGGTGATCCGCGCATATC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MHVTLPHGVQLRYDDAGSGQPVVLLHAFPLSAALWRAQLSTLGDRMRMIAPDLRGFGGSPATPLPQSLDDYATDVLALLD ILNIERAVLAGLSMGGYIAFALLLRAPERISGLLLADTRATADSEETRAARAVNARIALEEGSAALAGRMLPNLVAPGAS EALRAELLSIAAANPPEGIAAALHAMAARPDSTPLLAEIRVPTTVVVGAEDALTPPAEAQVMHNAIADSRFVVIPHAGHL SAIERPAEFNLALVELVMRVEAASRT
Sequences:
>Translated_266_residues MHVTLPHGVQLRYDDAGSGQPVVLLHAFPLSAALWRAQLSTLGDRMRMIAPDLRGFGGSPATPLPQSLDDYATDVLALLD ILNIERAVLAGLSMGGYIAFALLLRAPERISGLLLADTRATADSEETRAARAVNARIALEEGSAALAGRMLPNLVAPGAS EALRAELLSIAAANPPEGIAAALHAMAARPDSTPLLAEIRVPTTVVVGAEDALTPPAEAQVMHNAIADSRFVVIPHAGHL SAIERPAEFNLALVELVMRVEAASRT >Mature_266_residues MHVTLPHGVQLRYDDAGSGQPVVLLHAFPLSAALWRAQLSTLGDRMRMIAPDLRGFGGSPATPLPQSLDDYATDVLALLD ILNIERAVLAGLSMGGYIAFALLLRAPERISGLLLADTRATADSEETRAARAVNARIALEEGSAALAGRMLPNLVAPGAS EALRAELLSIAAANPPEGIAAALHAMAARPDSTPLLAEIRVPTTVVVGAEDALTPPAEAQVMHNAIADSRFVVIPHAGHL SAIERPAEFNLALVELVMRVEAASRT
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27597073, Length=115, Percent_Identity=34.7826086956522, Blast_Score=69, Evalue=5e-12, Organism=Escherichia coli, GI1787244, Length=236, Percent_Identity=25.8474576271186, Blast_Score=67, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324392, Length=263, Percent_Identity=25.4752851711027, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 27852; Mature: 27852
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVTLPHGVQLRYDDAGSGQPVVLLHAFPLSAALWRAQLSTLGDRMRMIAPDLRGFGGSP CEEECCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ATPLPQSLDDYATDVLALLDILNIERAVLAGLSMGGYIAFALLLRAPERISGLLLADTRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCEEEECCCC TADSEETRAARAVNARIALEEGSAALAGRMLPNLVAPGASEALRAELLSIAAANPPEGIA CCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH AALHAMAARPDSTPLLAEIRVPTTVVVGAEDALTPPAEAQVMHNAIADSRFVVIPHAGHL HHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCH SAIERPAEFNLALVELVMRVEAASRT HHHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHVTLPHGVQLRYDDAGSGQPVVLLHAFPLSAALWRAQLSTLGDRMRMIAPDLRGFGGSP CEEECCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ATPLPQSLDDYATDVLALLDILNIERAVLAGLSMGGYIAFALLLRAPERISGLLLADTRA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCEEEECCCC TADSEETRAARAVNARIALEEGSAALAGRMLPNLVAPGASEALRAELLSIAAANPPEGIA CCCCHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHH AALHAMAARPDSTPLLAEIRVPTTVVVGAEDALTPPAEAQVMHNAIADSRFVVIPHAGHL HHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCH SAIERPAEFNLALVELVMRVEAASRT HHHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]