| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524377
Identifier: 222524377
GI number: 222524377
Start: 1393712
End: 1395445
Strand: Direct
Name: 222524377
Synonym: Chy400_1101
Alternate gene names: NA
Gene position: 1393712-1395445 (Clockwise)
Preceding gene: 222524376
Following gene: 222524381
Centisome position: 26.45
GC content: 59.98
Gene sequence:
>1734_bases ATGAAACAACGGCTTTCGGTTGATCTGCCGGTAACACTTATCATCCAGTCGGTTCACGGCGATCTTACGATCCGAGGCTG GACTGAACCGCTGATCGAATGGCAGAGTGATGATCGACAGGTGACGGTGACTGCGCAAGCCGATGGTCTGGTTGTCAGCC CGTGTACTGACGATCTCCAGCTTGCGGTGCCAGAGACTGCTGATGTGCGGATCGTCGTGATCCACGGTGATGCCCGTGCC CAGAATCTCTATCGCCTTACCGCCGAGCGTGTTGAGGGAGATCTTTCGCTGCGCCAGATTACCGATCAGGCCACCATCGG CTCGCTCGAAGGTGATCTCACGGCAACGACCGTCGCTGAATTGAGCGTCACTGCTGATGTCCACGGTGATGTCTCACTCA CTGAGGTTCCAGTCGTCCATTTGGCTGGAGTGGCGGGTGATGTGAATGGGCGTGGTGTGTTGAGCCTGACCGTCAATCGG GTTGATGGCGATCTTGAGGTGGCCGGTTTGAGCGAGCAGTTACGGGTCGGTAACGTGAATGGCGACGTTGAACTTACACT CACCGGTACCGCCGATGTGCAGCTTGATCGTGTCAACGGTGATCTGACACTCACAGGACAGGCCCGTCGCGTGCAGTGCC TGGCGGTGAGCGGTGATGTTGATGCCTCCGAAGCCCAGATCGATCAGTTCACGGTTGAGACGGTGGCCGGCGATGTTGAA GCAGGAACTATCACCAACGGTCGGATGGTGACGATTGGTGGTGATTTGGAACTCAACAATGTCACCGGTGACCTGACAGT CAGTCATGTCGGAGGTGACTGCGTTGTCAAACAGGCTGCCGGCAACGTTATGATCACGGCTATTGGTGGTGATCTCCGTC TTCATGCCGCTGCCACAGCCGGTAGCACCATACGGGCCCAGGTTGGCGGTGATGCAGTCATCGTGCTCCCCGAAACGCCT GATCTGACCATCAACGCGGTTGTCGGAGGTGAAGTGAGTGGGATTGAAACCCGACCTTCAATACCCGGTCAGATGCTGGA GTTGCGCTATGGTCAGGGGAACGCCAGCATCCATCTGCATGTGGGTGGTGATCTCGCGATTAAAGGCGCAGGTCAGGTCG ATTCGTTCAGCAGTATCGGTGCGCAGCTTGGGCAAGAACTGAGTGAGCTTGGCCGCGAATTGGGGCGCGAGCTAAGTGAA CTGGGGCGTGAACTGGCCGCCGAGTTGCGAAGTGCGCTAGCCGGCGACGATCCGCGTGCGGGCGAGCGTGCCCGTGCGGC GGCTGAACGCTTCGCCGAGCAGGCCCGGCGCTGGAAAGCCGAGTCCGGGCCAGAACGGGTGCGCGTTAAGATCAATCAAC GCGAGTGGCGTCTTGATCCCGAACGGATCGAGCGTATTAAGGAACAGGCCCGTCAGGCTGCGGCTGCCGGTCTGAATGGA GCACTTGAAGCGGTCGAACGGGCGCTGAGTCGGATTCAGTCGCCACCACCGCCGCCCCCGGCTGCGCCAAATCCGCCGCC ACCACCGCATCCGCCGGCAGCGCCACCACCACCACCGCATCCGCCGGCAACCGGGCCAACAGTGCAGCTTCGCCCTGTCC CGTCACAGCCCCCGATGAGTGAGGCCGAACGAGAACAGCAACGGGCTTCGATCTTGCAGATGGTTGCCGATGGTCGTATC TCGCCGGCAGAGGGTGATTTGTTGCTGGCCGCTCTCGATGAGGATCGAGGTTAG
Upstream 100 bases:
>100_bases TGTTGCTGGAATGGCAGGATTTGGAAGAGGGCGAACGGATTGAGATTGTGATCGAATAACCCCTGGTACAACCGTAGTCT TCACCATGAGGAGGGTTTGC
Downstream 100 bases:
>100_bases AGGGTGTTCTATCAAATCTGGCAAGATACAGGTATGCATGTGCTCCAATCTGCCCATCATCCAACGCTCACTTGCACAAT ATGTATTTGTCAGAAGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MKQRLSVDLPVTLIIQSVHGDLTIRGWTEPLIEWQSDDRQVTVTAQADGLVVSPCTDDLQLAVPETADVRIVVIHGDARA QNLYRLTAERVEGDLSLRQITDQATIGSLEGDLTATTVAELSVTADVHGDVSLTEVPVVHLAGVAGDVNGRGVLSLTVNR VDGDLEVAGLSEQLRVGNVNGDVELTLTGTADVQLDRVNGDLTLTGQARRVQCLAVSGDVDASEAQIDQFTVETVAGDVE AGTITNGRMVTIGGDLELNNVTGDLTVSHVGGDCVVKQAAGNVMITAIGGDLRLHAAATAGSTIRAQVGGDAVIVLPETP DLTINAVVGGEVSGIETRPSIPGQMLELRYGQGNASIHLHVGGDLAIKGAGQVDSFSSIGAQLGQELSELGRELGRELSE LGRELAAELRSALAGDDPRAGERARAAAERFAEQARRWKAESGPERVRVKINQREWRLDPERIERIKEQARQAAAAGLNG ALEAVERALSRIQSPPPPPPAAPNPPPPPHPPAAPPPPPHPPATGPTVQLRPVPSQPPMSEAEREQQRASILQMVADGRI SPAEGDLLLAALDEDRG
Sequences:
>Translated_577_residues MKQRLSVDLPVTLIIQSVHGDLTIRGWTEPLIEWQSDDRQVTVTAQADGLVVSPCTDDLQLAVPETADVRIVVIHGDARA QNLYRLTAERVEGDLSLRQITDQATIGSLEGDLTATTVAELSVTADVHGDVSLTEVPVVHLAGVAGDVNGRGVLSLTVNR VDGDLEVAGLSEQLRVGNVNGDVELTLTGTADVQLDRVNGDLTLTGQARRVQCLAVSGDVDASEAQIDQFTVETVAGDVE AGTITNGRMVTIGGDLELNNVTGDLTVSHVGGDCVVKQAAGNVMITAIGGDLRLHAAATAGSTIRAQVGGDAVIVLPETP DLTINAVVGGEVSGIETRPSIPGQMLELRYGQGNASIHLHVGGDLAIKGAGQVDSFSSIGAQLGQELSELGRELGRELSE LGRELAAELRSALAGDDPRAGERARAAAERFAEQARRWKAESGPERVRVKINQREWRLDPERIERIKEQARQAAAAGLNG ALEAVERALSRIQSPPPPPPAAPNPPPPPHPPAAPPPPPHPPATGPTVQLRPVPSQPPMSEAEREQQRASILQMVADGRI SPAEGDLLLAALDEDRG >Mature_577_residues MKQRLSVDLPVTLIIQSVHGDLTIRGWTEPLIEWQSDDRQVTVTAQADGLVVSPCTDDLQLAVPETADVRIVVIHGDARA QNLYRLTAERVEGDLSLRQITDQATIGSLEGDLTATTVAELSVTADVHGDVSLTEVPVVHLAGVAGDVNGRGVLSLTVNR VDGDLEVAGLSEQLRVGNVNGDVELTLTGTADVQLDRVNGDLTLTGQARRVQCLAVSGDVDASEAQIDQFTVETVAGDVE AGTITNGRMVTIGGDLELNNVTGDLTVSHVGGDCVVKQAAGNVMITAIGGDLRLHAAATAGSTIRAQVGGDAVIVLPETP DLTINAVVGGEVSGIETRPSIPGQMLELRYGQGNASIHLHVGGDLAIKGAGQVDSFSSIGAQLGQELSELGRELGRELSE LGRELAAELRSALAGDDPRAGERARAAAERFAEQARRWKAESGPERVRVKINQREWRLDPERIERIKEQARQAAAAGLNG ALEAVERALSRIQSPPPPPPAAPNPPPPPHPPAAPPPPPHPPATGPTVQLRPVPSQPPMSEAEREQQRASILQMVADGRI SPAEGDLLLAALDEDRG
Specific function: Unknown
COG id: COG3595
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60632; Mature: 60632
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRLSVDLPVTLIIQSVHGDLTIRGWTEPLIEWQSDDRQVTVTAQADGLVVSPCTDDLQ CCCCEECCCCCEEEEEECCCCEEEECCCCHHHCCCCCCCEEEEEEECCCEEEECCCCCEE LAVPETADVRIVVIHGDARAQNLYRLTAERVEGDLSLRQITDQATIGSLEGDLTATTVAE EECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCHHCCCCCCCEEEEEEEE LSVTADVHGDVSLTEVPVVHLAGVAGDVNGRGVLSLTVNRVDGDLEVAGLSEQLRVGNVN EEEEEECCCCEEEEECCEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCEEECCCC GDVELTLTGTADVQLDRVNGDLTLTGQARRVQCLAVSGDVDASEAQIDQFTVETVAGDVE CCEEEEEECCCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCHHHHHHEEEEHHCCCCC AGTITNGRMVTIGGDLELNNVTGDLTVSHVGGDCVVKQAAGNVMITAIGGDLRLHAAATA CCEECCCEEEEEECCEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCEEEEEEECC GSTIRAQVGGDAVIVLPETPDLTINAVVGGEVSGIETRPSIPGQMLELRYGQGNASIHLH CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE VGGDLAIKGAGQVDSFSSIGAQLGQELSELGRELGRELSELGRELAAELRSALAGDDPRA ECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GERARAAAERFAEQARRWKAESGPERVRVKINQREWRLDPERIERIKEQARQAAAAGLNG CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH ALEAVERALSRIQSPPPPPPAAPNPPPPPHPPAAPPPPPHPPATGPTVQLRPVPSQPPMS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHH EAEREQQRASILQMVADGRISPAEGDLLLAALDEDRG HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MKQRLSVDLPVTLIIQSVHGDLTIRGWTEPLIEWQSDDRQVTVTAQADGLVVSPCTDDLQ CCCCEECCCCCEEEEEECCCCEEEECCCCHHHCCCCCCCEEEEEEECCCEEEECCCCCEE LAVPETADVRIVVIHGDARAQNLYRLTAERVEGDLSLRQITDQATIGSLEGDLTATTVAE EECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHCCHHCCCCCCCEEEEEEEE LSVTADVHGDVSLTEVPVVHLAGVAGDVNGRGVLSLTVNRVDGDLEVAGLSEQLRVGNVN EEEEEECCCCEEEEECCEEEEEEECCCCCCCEEEEEEEEECCCCEEEECCCCCEEECCCC GDVELTLTGTADVQLDRVNGDLTLTGQARRVQCLAVSGDVDASEAQIDQFTVETVAGDVE CCEEEEEECCCEEEEEECCCCEEEECCCCEEEEEEEECCCCCCHHHHHHEEEEHHCCCCC AGTITNGRMVTIGGDLELNNVTGDLTVSHVGGDCVVKQAAGNVMITAIGGDLRLHAAATA CCEECCCEEEEEECCEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCEEEEEEECC GSTIRAQVGGDAVIVLPETPDLTINAVVGGEVSGIETRPSIPGQMLELRYGQGNASIHLH CCEEEEEECCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEE VGGDLAIKGAGQVDSFSSIGAQLGQELSELGRELGRELSELGRELAAELRSALAGDDPRA ECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GERARAAAERFAEQARRWKAESGPERVRVKINQREWRLDPERIERIKEQARQAAAAGLNG CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH ALEAVERALSRIQSPPPPPPAAPNPPPPPHPPAAPPPPPHPPATGPTVQLRPVPSQPPMS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHH EAEREQQRASILQMVADGRISPAEGDLLLAALDEDRG HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA