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The map label for this gene is ydhM [C]

Identifier: 222524367

GI number: 222524367

Start: 1384673

End: 1385317

Strand: Reverse

Name: ydhM [C]

Synonym: Chy400_1090

Alternate gene names: 222524367

Gene position: 1385317-1384673 (Counterclockwise)

Preceding gene: 222524368

Following gene: 222524366

Centisome position: 26.29

GC content: 56.9

Gene sequence:

>645_bases
ATGGAACAAACCCTGCTGCCCGATCCGCGTATTAGCGATAGCCCCACCGCGCTCCGCATCCTCGATGTGGCAGCGCAGCT
CTTTATGCAGCGTGGCTATCGGGCAGTTTCGATCAACGACATTATTCAGGTTGCCGGTATTACCAAGCCAACCCTCTACT
ACTACTTCAGCGACAAGGAAGAACTCTTTGTGCAGATGGGGTTGCGTGTGCTGGCAGCAATGCACCAGCCGCTAACCGAT
CTGGTTGGCGCTGACCGCCCACTGAACGAGCGTCTTCAGGCTATGGCAACGGTGCTGATGGACTATGAAGGCGATATGCG
GATGATGCGCCACGAGATGATGGAGCATCTCGGTGACGCGGCCCGGGCCAGGTTGAGTGTTGCCTTTTACCGGCATTTGT
TTGCCCCCCTTACCCGGGTGATGGACGAAGCAATTGCCGCCGGTTTGATCCGCAGTGATCTTTCGGCGGCGACAGCAGCG
ATGCTGTTTCTCAGTCTCTGTGAAACCTTTCACGAGATGGCTCCCCCCAATCCGATGGCGCAGTGGGTGGGTAGCGTCTC
CCCGTCTCTGTTAGTCGATCTCTTTTTGCACGGCGTTGGCCAGTCCACTACGCCCAATTCTTCAGCAGGAGCAGTACAGG
CATGA

Upstream 100 bases:

>100_bases
TTTATCGACAAAATATTTGCAAAGCATTGACAATGATTGTTCATCGTGGTATATTACTTACCGGTCGGTAAGAATTAGTT
AGACGAGACTGTTGAAAGTT

Downstream 100 bases:

>100_bases
GCACGTTACCCCAGTCTCGACCGCGTTTTGGTTTACCCCGTCTCCCCTGGCCGGTGTGGATTGCGGCCGGCCTTTTGATT
GCAGTTATCGCGACGGTTGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; TetR Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MEQTLLPDPRISDSPTALRILDVAAQLFMQRGYRAVSINDIIQVAGITKPTLYYYFSDKEELFVQMGLRVLAAMHQPLTD
LVGADRPLNERLQAMATVLMDYEGDMRMMRHEMMEHLGDAARARLSVAFYRHLFAPLTRVMDEAIAAGLIRSDLSAATAA
MLFLSLCETFHEMAPPNPMAQWVGSVSPSLLVDLFLHGVGQSTTPNSSAGAVQA

Sequences:

>Translated_214_residues
MEQTLLPDPRISDSPTALRILDVAAQLFMQRGYRAVSINDIIQVAGITKPTLYYYFSDKEELFVQMGLRVLAAMHQPLTD
LVGADRPLNERLQAMATVLMDYEGDMRMMRHEMMEHLGDAARARLSVAFYRHLFAPLTRVMDEAIAAGLIRSDLSAATAA
MLFLSLCETFHEMAPPNPMAQWVGSVSPSLLVDLFLHGVGQSTTPNSSAGAVQA
>Mature_214_residues
MEQTLLPDPRISDSPTALRILDVAAQLFMQRGYRAVSINDIIQVAGITKPTLYYYFSDKEELFVQMGLRVLAAMHQPLTD
LVGADRPLNERLQAMATVLMDYEGDMRMMRHEMMEHLGDAARARLSVAFYRHLFAPLTRVMDEAIAAGLIRSDLSAATAA
MLFLSLCETFHEMAPPNPMAQWVGSVSPSLLVDLFLHGVGQSTTPNSSAGAVQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23615; Mature: 23615

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTLLPDPRISDSPTALRILDVAAQLFMQRGYRAVSINDIIQVAGITKPTLYYYFSDKE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEEECCHH
ELFVQMGLRVLAAMHQPLTDLVGADRPLNERLQAMATVLMDYEGDMRMMRHEMMEHLGDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARARLSVAFYRHLFAPLTRVMDEAIAAGLIRSDLSAATAAMLFLSLCETFHEMAPPNPMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QWVGSVSPSLLVDLFLHGVGQSTTPNSSAGAVQA
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQTLLPDPRISDSPTALRILDVAAQLFMQRGYRAVSINDIIQVAGITKPTLYYYFSDKE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCEEEEEECCHH
ELFVQMGLRVLAAMHQPLTDLVGADRPLNERLQAMATVLMDYEGDMRMMRHEMMEHLGDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ARARLSVAFYRHLFAPLTRVMDEAIAAGLIRSDLSAATAAMLFLSLCETFHEMAPPNPMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QWVGSVSPSLLVDLFLHGVGQSTTPNSSAGAVQA
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA