| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524363
Identifier: 222524363
GI number: 222524363
Start: 1379826
End: 1380440
Strand: Direct
Name: 222524363
Synonym: Chy400_1086
Alternate gene names: NA
Gene position: 1379826-1380440 (Clockwise)
Preceding gene: 222524362
Following gene: 222524374
Centisome position: 26.19
GC content: 65.2
Gene sequence:
>615_bases ATGATCAACTATGGCAGCAAGAAGGACGAGGGCGAGGCGGGCAAGGGGGTCGGCGAAGCACTGCGTTCGATGAGCGATCA GATCGGTCGCCAGGCGCAAGAGATTAAGCGGTTGCAGGAAGCACTTGAGGCAGCGCAGCAGGATGCCGCAGCCGCCGAAC AGGCTCGCAAGGCATTGGCCGAGGCCGAAGCACGGCTGGCGCAGATGGAGGCTGAACTAAAACGGTTGCGCGATCAACAG GCCACAGCCAGTACCGGCGGCAAAACAGTGAGTCCAACGGCGTCCGCCACCGACATCGGTGGGGCCATCGGTGCGCTGGG CAGCAGTGGCGTGGTCAAGATCGGCCCCAGCACCCCGGCAGCCACCCCCACAACCGGCGGCTTACAGGTTGGTGGTGTGG CGTATGTGCAGAAGGCCGGCGGCAAGAATCTGCGCCTGCGCAGCGCCCCTGGCCTCGACTCAACCGTCCTCGACGGCCTG CCCCCCGGCACCCAACTCACGCTACTGGCCGGCCCGCAAGAGAAAGACGGTTATCCGTGGTGGCAGATTCGCACAACCGA CGGGCGCGAAGGCTGGGTCGCCGGTACCGAACTGGTCACCAGCCCGGAAGGTTAA
Upstream 100 bases:
>100_bases CGATCCAGGCCGATCTACCACGCTGACAACACGTCCGGGAACAGCTATAATGCATCTAACCGTAGATGCGGTGGCGGTGC GCAAGGGAAGGAGTCGTTCC
Downstream 100 bases:
>100_bases GACAGGGGTCGTCCGTCTACTGCCAGATAGGATGTAGTTACCTCGCGTGGGTTGGAGTGCGGGAGCGTGGCTTTTGCAGT TGCCATGCATGATACCGGGC
Product: SH3 type 3 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MINYGSKKDEGEAGKGVGEALRSMSDQIGRQAQEIKRLQEALEAAQQDAAAAEQARKALAEAEARLAQMEAELKRLRDQQ ATASTGGKTVSPTASATDIGGAIGALGSSGVVKIGPSTPAATPTTGGLQVGGVAYVQKAGGKNLRLRSAPGLDSTVLDGL PPGTQLTLLAGPQEKDGYPWWQIRTTDGREGWVAGTELVTSPEG
Sequences:
>Translated_204_residues MINYGSKKDEGEAGKGVGEALRSMSDQIGRQAQEIKRLQEALEAAQQDAAAAEQARKALAEAEARLAQMEAELKRLRDQQ ATASTGGKTVSPTASATDIGGAIGALGSSGVVKIGPSTPAATPTTGGLQVGGVAYVQKAGGKNLRLRSAPGLDSTVLDGL PPGTQLTLLAGPQEKDGYPWWQIRTTDGREGWVAGTELVTSPEG >Mature_204_residues MINYGSKKDEGEAGKGVGEALRSMSDQIGRQAQEIKRLQEALEAAQQDAAAAEQARKALAEAEARLAQMEAELKRLRDQQ ATASTGGKTVSPTASATDIGGAIGALGSSGVVKIGPSTPAATPTTGGLQVGGVAYVQKAGGKNLRLRSAPGLDSTVLDGL PPGTQLTLLAGPQEKDGYPWWQIRTTDGREGWVAGTELVTSPEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20952; Mature: 20952
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINYGSKKDEGEAGKGVGEALRSMSDQIGRQAQEIKRLQEALEAAQQDAAAAEQARKALA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEARLAQMEAELKRLRDQQATASTGGKTVSPTASATDIGGAIGALGSSGVVKIGPSTPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCC ATPTTGGLQVGGVAYVQKAGGKNLRLRSAPGLDSTVLDGLPPGTQLTLLAGPQEKDGYPW CCCCCCCEEECHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCE WQIRTTDGREGWVAGTELVTSPEG EEEEECCCCCCCEECCEEECCCCC >Mature Secondary Structure MINYGSKKDEGEAGKGVGEALRSMSDQIGRQAQEIKRLQEALEAAQQDAAAAEQARKALA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAEARLAQMEAELKRLRDQQATASTGGKTVSPTASATDIGGAIGALGSSGVVKIGPSTPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCCCCCEEEECCCCCC ATPTTGGLQVGGVAYVQKAGGKNLRLRSAPGLDSTVLDGLPPGTQLTLLAGPQEKDGYPW CCCCCCCEEECHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCE WQIRTTDGREGWVAGTELVTSPEG EEEEECCCCCCCEECCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA