Click here to switch to the map view.

The map label for this gene is 222524362

Identifier: 222524362

GI number: 222524362

Start: 1378468

End: 1379751

Strand: Direct

Name: 222524362

Synonym: Chy400_1085

Alternate gene names: NA

Gene position: 1378468-1379751 (Clockwise)

Preceding gene: 222524357

Following gene: 222524363

Centisome position: 26.16

GC content: 62.15

Gene sequence:

>1284_bases
ATGCAGGTACTTGTTATCGGCGGCGGTGTCGCCGGTCTGGTGTGTGCGCGGACACTCCACCGCAAGGGGTATGAGGTAAC
TCTGATCGAAGCCACCGATGGTCTCGGTGGCCGGGTGCGTTCTGATCAGGTTGATGGCTTTATCCTCGACCGTGGCTTTC
AGGTGCTCTTTACCGCGTATCCGGCGGTACAACGGCAACTTCAGCTCGCGGCGTTAGACCTGCGGGCATTCGATCCAGGC
GCGATTGTCGTCTGGCAAGGCCGTCACTTCGTGTTAACCGATCCACTCCGGGATCGCGATCCTGCGGCACTGGCCGGAGC
TGTACTGGCACCGGTCGTTCCCTTCAGCGATAAACTCCGCACCCTCCAGGTGGCGTTGCGCATGCGCCGGCACACGATTG
ATGACCTGCTGGCCGGCCCGGACCGCACCACGATTGAAGAGTTACGGGCACTGGGGTTTAGTACCCAGATGATTGACCGC
TTCTTCCGCCCCTTCTTCGGCGGCATCTTTCTGGATCGTTCGCTACAAACCAGCGCCAAGTGCTTCCGGTTCAACTTCAA
GATGATGAGCGACGGTGAGACGGTGGTGCCGAATCGGGGGATGGGCGCAATTGCCGAACAGCTCGCTACTGACTTGCGCA
CAGCCGGACGCATACGGCTCAATACACGGGCGGTGGCATTGGTAGAGGAATCTGGCAGGGTGTGCGGCGTGCGTCTCGCC
GACGGCAGTACAATGATGGCCGACGCCGTCGTCCTGGCGACCCCGGCCCCCGAAACAGCCCGCCTCAGCGGTTTACCGAT
GCCGGAAGGCCAGCTCGGTTCGGCGTGTGTCTGGCTGGCCACCCGCCAGCCGCTGTATCGGGGCAAGAAGCTGATCCTGA
ATGCCGACGAAAAAGCCTTTGTCAACACCCTTGCCCCCATGAGTGCAGTGGCACCGGGCTATGCGCCCACCGGCTGGCAT
CTCTACGCCGCAGCGATCCTCGGCGTTCCCGAACAGGACGACAGCACGGTCGTCGCCCGCGCGATGGTCGATCTGAATCG
CATGTTCATCAACGAAGCCACAGCCACCACTGCGCTGGCGAATGCCCGTATCCTGCGGGTTGACCGGATTCCGTTCAGTC
AGTTCCGCCAACCACCCGGCCTGCACCCCAACCTGCCCGACAACCGAACCGAACGGCGTGGTCTGTATCTGGCCGGGGAA
GTGACGGAAGCCAGTAGCATCAATGCTGCCCTGCTCAGTGGCGAACGTTGCGCAGAGGCGATCCAGGCCGATCTACCACG
CTGA

Upstream 100 bases:

>100_bases
AAGTTGTGAATCATGATGTCCCCCTTTATCCTTTCGAGCAGGCTCGCTGTGAAACATAGTATACTCGAAATGGTAACGTG
CTTACCTAGAAGGAAGGAGT

Downstream 100 bases:

>100_bases
CAACACGTCCGGGAACAGCTATAATGCATCTAACCGTAGATGCGGTGGCGGTGCGCAAGGGAAGGAGTCGTTCCATGATC
AACTATGGCAGCAAGAAGGA

Product: amine oxidase

Products: NA

Alternate protein names: Oxidoreductase; Amine Oxidase Flavin-Containing; Flavin-Containing Amine-Oxidoreductase; FAD Dependent Oxidoreductase; Amine Oxidoreductase; Phytoene Dehydrogenase; Monoamine Oxidase; Udp-Galactopyranose Mutase; Flavin Containing Amine Oxidoreductase

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MQVLVIGGGVAGLVCARTLHRKGYEVTLIEATDGLGGRVRSDQVDGFILDRGFQVLFTAYPAVQRQLQLAALDLRAFDPG
AIVVWQGRHFVLTDPLRDRDPAALAGAVLAPVVPFSDKLRTLQVALRMRRHTIDDLLAGPDRTTIEELRALGFSTQMIDR
FFRPFFGGIFLDRSLQTSAKCFRFNFKMMSDGETVVPNRGMGAIAEQLATDLRTAGRIRLNTRAVALVEESGRVCGVRLA
DGSTMMADAVVLATPAPETARLSGLPMPEGQLGSACVWLATRQPLYRGKKLILNADEKAFVNTLAPMSAVAPGYAPTGWH
LYAAAILGVPEQDDSTVVARAMVDLNRMFINEATATTALANARILRVDRIPFSQFRQPPGLHPNLPDNRTERRGLYLAGE
VTEASSINAALLSGERCAEAIQADLPR

Sequences:

>Translated_427_residues
MQVLVIGGGVAGLVCARTLHRKGYEVTLIEATDGLGGRVRSDQVDGFILDRGFQVLFTAYPAVQRQLQLAALDLRAFDPG
AIVVWQGRHFVLTDPLRDRDPAALAGAVLAPVVPFSDKLRTLQVALRMRRHTIDDLLAGPDRTTIEELRALGFSTQMIDR
FFRPFFGGIFLDRSLQTSAKCFRFNFKMMSDGETVVPNRGMGAIAEQLATDLRTAGRIRLNTRAVALVEESGRVCGVRLA
DGSTMMADAVVLATPAPETARLSGLPMPEGQLGSACVWLATRQPLYRGKKLILNADEKAFVNTLAPMSAVAPGYAPTGWH
LYAAAILGVPEQDDSTVVARAMVDLNRMFINEATATTALANARILRVDRIPFSQFRQPPGLHPNLPDNRTERRGLYLAGE
VTEASSINAALLSGERCAEAIQADLPR
>Mature_427_residues
MQVLVIGGGVAGLVCARTLHRKGYEVTLIEATDGLGGRVRSDQVDGFILDRGFQVLFTAYPAVQRQLQLAALDLRAFDPG
AIVVWQGRHFVLTDPLRDRDPAALAGAVLAPVVPFSDKLRTLQVALRMRRHTIDDLLAGPDRTTIEELRALGFSTQMIDR
FFRPFFGGIFLDRSLQTSAKCFRFNFKMMSDGETVVPNRGMGAIAEQLATDLRTAGRIRLNTRAVALVEESGRVCGVRLA
DGSTMMADAVVLATPAPETARLSGLPMPEGQLGSACVWLATRQPLYRGKKLILNADEKAFVNTLAPMSAVAPGYAPTGWH
LYAAAILGVPEQDDSTVVARAMVDLNRMFINEATATTALANARILRVDRIPFSQFRQPPGLHPNLPDNRTERRGLYLAGE
VTEASSINAALLSGERCAEAIQADLPR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46392; Mature: 46392

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVLVIGGGVAGLVCARTLHRKGYEVTLIEATDGLGGRVRSDQVDGFILDRGFQVLFTAY
CEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEHHH
PAVQRQLQLAALDLRAFDPGAIVVWQGRHFVLTDPLRDRDPAALAGAVLAPVVPFSDKLR
HHHHHHHHHHEEEEEECCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHH
TLQVALRMRRHTIDDLLAGPDRTTIEELRALGFSTQMIDRFFRPFFGGIFLDRSLQTSAK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHCCE
CFRFNFKMMSDGETVVPNRGMGAIAEQLATDLRTAGRIRLNTRAVALVEESGRVCGVRLA
EEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHCCEEEEECEEEEEEECCCCEEEEEEE
DGSTMMADAVVLATPAPETARLSGLPMPEGQLGSACVWLATRQPLYRGKKLILNADEKAF
CCCEEEECEEEEECCCCCCHHCCCCCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCHHH
VNTLAPMSAVAPGYAPTGWHLYAAAILGVPEQDDSTVVARAMVDLNRMFINEATATTALA
HHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NARILRVDRIPFSQFRQPPGLHPNLPDNRTERRGLYLAGEVTEASSINAALLSGERCAEA
CCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHH
IQADLPR
HHHCCCC
>Mature Secondary Structure
MQVLVIGGGVAGLVCARTLHRKGYEVTLIEATDGLGGRVRSDQVDGFILDRGFQVLFTAY
CEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCEEEEHHH
PAVQRQLQLAALDLRAFDPGAIVVWQGRHFVLTDPLRDRDPAALAGAVLAPVVPFSDKLR
HHHHHHHHHHEEEEEECCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHH
TLQVALRMRRHTIDDLLAGPDRTTIEELRALGFSTQMIDRFFRPFFGGIFLDRSLQTSAK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCHHHCCE
CFRFNFKMMSDGETVVPNRGMGAIAEQLATDLRTAGRIRLNTRAVALVEESGRVCGVRLA
EEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHCCEEEEECEEEEEEECCCCEEEEEEE
DGSTMMADAVVLATPAPETARLSGLPMPEGQLGSACVWLATRQPLYRGKKLILNADEKAF
CCCEEEECEEEEECCCCCCHHCCCCCCCCCCCCCEEEEEECCCCHHCCCEEEEECCCHHH
VNTLAPMSAVAPGYAPTGWHLYAAAILGVPEQDDSTVVARAMVDLNRMFINEATATTALA
HHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NARILRVDRIPFSQFRQPPGLHPNLPDNRTERRGLYLAGEVTEASSINAALLSGERCAEA
CCEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHH
IQADLPR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA