| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524350
Identifier: 222524350
GI number: 222524350
Start: 1367548
End: 1368594
Strand: Reverse
Name: 222524350
Synonym: Chy400_1073
Alternate gene names: NA
Gene position: 1368594-1367548 (Counterclockwise)
Preceding gene: 222524351
Following gene: 222524349
Centisome position: 25.97
GC content: 61.13
Gene sequence:
>1047_bases ATGAGTCGTATTCTGATCTGTGCCACGCAAGTTCCGTTCGTTCGTGGTGGCGCTGAATATCTGGTTGAAAGCCTGCGCGA TGAGTTGCAGCGCCGCGGCCATACTGTTGATGTGGTCGCGCTGCCGTTTCAGTGGCATCCGGTAGAACGCATCATCGACA GTGCCCTGGCCTGGCGCCTGCTCGACATCAGTCACGTCAACGGCGAGCCGGTTGATCTGGTGATTGCAACCAAATTCCCG TCGTACCTGATCCGCCACGCCCGCAAAGTGCTCTGGCTGGTACATCAGCACCGGCAGGCTTACGACTGGTATGGAACGCC GTTGAGCGATTTTGACGGTTCGCCTTCACACCGGGCAGTCCGCGAGCAGATCTTTCGGATTGATAGCCGGGCCCTCAACG AATGCCAGGCCCGTTTCACGATCTCGCACAATGTCAGTCGGCGTCTCGAACGCTTCAACGGCCTGAGCAGCACACCACTC TACCCGCCCAGTCGCTACGCTGGCAAATTGTGGGCAGGTGACTACGGCGACTACATCCTCTCTCCGGCCCGGCTTGATCG GGCCAAGCGGATCGACCTGCTCCTGGCGGCGCTGGCACAGACTGCCTCGCCAGTCCGGGCAATCATCGCCGGCACCGGCC CTGATCGCGAACGGTTGCAGCGTCTGGCTGCCGACTACGGGCTGGGTGATCGGGTCAGTTTTCGCGGTTTTGTGCCGGAC GACGAGTTGATTGACCTCTACGCCCACGCCAGAGCCGTCTACTACGCACCGGTTGATGAAGATTACGGCTTTGCGACGGT CGAGGCATTCGGTGCCGCTCGCCCCGTCATCACTACCGACGATGCGGGTGGCGTGTTGGAGTTCGTCCGCCACGGGGAAA ATGGCCTCGTTTCACCGCCCGACCCGGCAGCGATTGCCGGTCATCTTGATCAACTGACCGGTGATGTTGCCCTTGCCGCA CGCCTCGGTCGTGCCGGCAGGCCGCTGGTGGATGGTATTACGTGGGATCGGGTGATTGGGGCGTTGTTGGGGGGAAATAG GAGATAG
Upstream 100 bases:
>100_bases ACGATACCGCGGCGCGGGCTATCCGCCTGTTAGCCGCCGAGAACGCCGCTTTGCGTGCCGAACTGACTGCCCTGCGCAAC CAGATAGAACAATCGTCATC
Downstream 100 bases:
>100_bases GAAATAGGAGAGAGGAGATAGGAAATAGGAGAGAGGAGATAGGAAATAGGAGGGAGGAGATAGGAAATAGGAGGGAGGAG ATAGGAAATAGGAGAGAGGG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSRILICATQVPFVRGGAEYLVESLRDELQRRGHTVDVVALPFQWHPVERIIDSALAWRLLDISHVNGEPVDLVIATKFP SYLIRHARKVLWLVHQHRQAYDWYGTPLSDFDGSPSHRAVREQIFRIDSRALNECQARFTISHNVSRRLERFNGLSSTPL YPPSRYAGKLWAGDYGDYILSPARLDRAKRIDLLLAALAQTASPVRAIIAGTGPDRERLQRLAADYGLGDRVSFRGFVPD DELIDLYAHARAVYYAPVDEDYGFATVEAFGAARPVITTDDAGGVLEFVRHGENGLVSPPDPAAIAGHLDQLTGDVALAA RLGRAGRPLVDGITWDRVIGALLGGNRR
Sequences:
>Translated_348_residues MSRILICATQVPFVRGGAEYLVESLRDELQRRGHTVDVVALPFQWHPVERIIDSALAWRLLDISHVNGEPVDLVIATKFP SYLIRHARKVLWLVHQHRQAYDWYGTPLSDFDGSPSHRAVREQIFRIDSRALNECQARFTISHNVSRRLERFNGLSSTPL YPPSRYAGKLWAGDYGDYILSPARLDRAKRIDLLLAALAQTASPVRAIIAGTGPDRERLQRLAADYGLGDRVSFRGFVPD DELIDLYAHARAVYYAPVDEDYGFATVEAFGAARPVITTDDAGGVLEFVRHGENGLVSPPDPAAIAGHLDQLTGDVALAA RLGRAGRPLVDGITWDRVIGALLGGNRR >Mature_347_residues SRILICATQVPFVRGGAEYLVESLRDELQRRGHTVDVVALPFQWHPVERIIDSALAWRLLDISHVNGEPVDLVIATKFPS YLIRHARKVLWLVHQHRQAYDWYGTPLSDFDGSPSHRAVREQIFRIDSRALNECQARFTISHNVSRRLERFNGLSSTPLY PPSRYAGKLWAGDYGDYILSPARLDRAKRIDLLLAALAQTASPVRAIIAGTGPDRERLQRLAADYGLGDRVSFRGFVPDD ELIDLYAHARAVYYAPVDEDYGFATVEAFGAARPVITTDDAGGVLEFVRHGENGLVSPPDPAAIAGHLDQLTGDVALAAR LGRAGRPLVDGITWDRVIGALLGGNRR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 38605; Mature: 38474
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: PS00024 HEMOPEXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRILICATQVPFVRGGAEYLVESLRDELQRRGHTVDVVALPFQWHPVERIIDSALAWRL CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH LDISHVNGEPVDLVIATKFPSYLIRHARKVLWLVHQHRQAYDWYGTPLSDFDGSPSHRAV HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH REQIFRIDSRALNECQARFTISHNVSRRLERFNGLSSTPLYPPSRYAGKLWAGDYGDYIL HHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCCCHHHCCCEECCCCCCHHC SPARLDRAKRIDLLLAALAQTASPVRAIIAGTGPDRERLQRLAADYGLGDRVSFRGFVPD CHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCCC DELIDLYAHARAVYYAPVDEDYGFATVEAFGAARPVITTDDAGGVLEFVRHGENGLVSPP HHHHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCCC DPAAIAGHLDQLTGDVALAARLGRAGRPLVDGITWDRVIGALLGGNRR CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCC >Mature Secondary Structure SRILICATQVPFVRGGAEYLVESLRDELQRRGHTVDVVALPFQWHPVERIIDSALAWRL CCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH LDISHVNGEPVDLVIATKFPSYLIRHARKVLWLVHQHRQAYDWYGTPLSDFDGSPSHRAV HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH REQIFRIDSRALNECQARFTISHNVSRRLERFNGLSSTPLYPPSRYAGKLWAGDYGDYIL HHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCCCHHHCCCEECCCCCCHHC SPARLDRAKRIDLLLAALAQTASPVRAIIAGTGPDRERLQRLAADYGLGDRVSFRGFVPD CHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHCCCCCCCEECCCCCC DELIDLYAHARAVYYAPVDEDYGFATVEAFGAARPVITTDDAGGVLEFVRHGENGLVSPP HHHHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHCCCCCCCCCC DPAAIAGHLDQLTGDVALAARLGRAGRPLVDGITWDRVIGALLGGNRR CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]