| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is korB [H]
Identifier: 222524316
GI number: 222524316
Start: 1323444
End: 1324292
Strand: Direct
Name: korB [H]
Synonym: Chy400_1039
Alternate gene names: 222524316
Gene position: 1323444-1324292 (Clockwise)
Preceding gene: 222524315
Following gene: 222524318
Centisome position: 25.12
GC content: 55.36
Gene sequence:
>849_bases ATGACTGCTGTACCAGTTACCACATCGCCAGTTGTCTACAAGCCATCCGATTATCGCAGCGACCTGAAACCGATCTGGTG TCCGGGATGTGGCGATTTCGGAGTACTGGCTGCCATTCAGCAGGCCCTGGCCGCAGCTCAGATTAACCCCAAAGATCTGG CTGTCGTCTCCGGTATCGGTTGTAGTTCGCGGTTGCCGGGCTTCTTGCAGACCTACGGGTTGCATACAGTACACGGACGT GCCTTGCCGGCAGCGATTGGGTTAAAGATCGCCCGTCCAGACCTGACGGTTATGGCCGTTGGGGGTGATGGTGACTTCTT CAGCATTGGCCTGGGCCATCTGCCTCATGCGGCCCGGCGCGATCTGGATATGACCGTTATCGTGATGGATAATGCCATTT ACGGCTTAACCAAAGGGCAAACCTCACCAACCTCACCGCGTGGTCACGTAACGAAGAGCACTCCTTACGGTCAGTCGGCA CAACCGCTGCATCCCCTGGCAATTGTCCTGTCCAGCGGCGCTTCGTTTGTGGCCCGTGGTTTCTCAAGTCAGCCAAAACA GTTAGCTGAACTGATCAAAGCTGGTCTGGAACATCGTGGATTTGCCTTTATCCACGTGTTGAGTCCGTGTGTGACGTTCT ACGATACCTACAAGCTGTACAAGGAGCTGGTGTACAATTTGCCCGACAGCCACGACCCCTCCGATCTCGATGCGGCAATG CGTTACGCCATTGAGAGTGAACGGTTGCCACTCGGTATTTTCTTCCGGCGGCCACCCCTTGAGCCACTCCCCCGACCGAC CCCGAAGCCGTTTGATACACAGGAGTATTTAAACCGTTTTCGGGTATAG
Upstream 100 bases:
>100_bases GCCGTTCTCGCGCCTTGAGATTCTACGCCAGATTCATGCGTTGCACGGGCTGGCCGAGCCAGTGTTGGTTTAAGTGTATC AACGAAGGTCAGGTAGGAAT
Downstream 100 bases:
>100_bases CGATGCGATGACAATCAGACACTCACCGGTGACAGGAAAGCTCCTGTCACCGGTTTTTTTACGGGCTGTAGAGCGGTATC AATGCTCTGCAAGAGGCAGG
Product: pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
Products: NA
Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTAVPVTTSPVVYKPSDYRSDLKPIWCPGCGDFGVLAAIQQALAAAQINPKDLAVVSGIGCSSRLPGFLQTYGLHTVHGR ALPAAIGLKIARPDLTVMAVGGDGDFFSIGLGHLPHAARRDLDMTVIVMDNAIYGLTKGQTSPTSPRGHVTKSTPYGQSA QPLHPLAIVLSSGASFVARGFSSQPKQLAELIKAGLEHRGFAFIHVLSPCVTFYDTYKLYKELVYNLPDSHDPSDLDAAM RYAIESERLPLGIFFRRPPLEPLPRPTPKPFDTQEYLNRFRV
Sequences:
>Translated_282_residues MTAVPVTTSPVVYKPSDYRSDLKPIWCPGCGDFGVLAAIQQALAAAQINPKDLAVVSGIGCSSRLPGFLQTYGLHTVHGR ALPAAIGLKIARPDLTVMAVGGDGDFFSIGLGHLPHAARRDLDMTVIVMDNAIYGLTKGQTSPTSPRGHVTKSTPYGQSA QPLHPLAIVLSSGASFVARGFSSQPKQLAELIKAGLEHRGFAFIHVLSPCVTFYDTYKLYKELVYNLPDSHDPSDLDAAM RYAIESERLPLGIFFRRPPLEPLPRPTPKPFDTQEYLNRFRV >Mature_281_residues TAVPVTTSPVVYKPSDYRSDLKPIWCPGCGDFGVLAAIQQALAAAQINPKDLAVVSGIGCSSRLPGFLQTYGLHTVHGRA LPAAIGLKIARPDLTVMAVGGDGDFFSIGLGHLPHAARRDLDMTVIVMDNAIYGLTKGQTSPTSPRGHVTKSTPYGQSAQ PLHPLAIVLSSGASFVARGFSSQPKQLAELIKAGLEHRGFAFIHVLSPCVTFYDTYKLYKELVYNLPDSHDPSDLDAAMR YAIESERLPLGIFFRRPPLEPLPRPTPKPFDTQEYLNRFRV
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.3 [H]
Molecular weight: Translated: 30612; Mature: 30480
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVPVTTSPVVYKPSDYRSDLKPIWCPGCGDFGVLAAIQQALAAAQINPKDLAVVSGIG CCCCCCCCCCEEECCCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCC CSSRLPGFLQTYGLHTVHGRALPAAIGLKIARPDLTVMAVGGDGDFFSIGLGHLPHAARR CHHHCCHHHHHHCCCEECCCCCHHHHCEEEECCCEEEEEECCCCCEEEECCCCCCHHHHC DLDMTVIVMDNAIYGLTKGQTSPTSPRGHVTKSTPYGQSAQPLHPLAIVLSSGASFVARG CCCEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCHHHHHHC FSSQPKQLAELIKAGLEHRGFAFIHVLSPCVTFYDTYKLYKELVYNLPDSHDPSDLDAAM CCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RYAIESERLPLGIFFRRPPLEPLPRPTPKPFDTQEYLNRFRV HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TAVPVTTSPVVYKPSDYRSDLKPIWCPGCGDFGVLAAIQQALAAAQINPKDLAVVSGIG CCCCCCCCCEEECCCCCHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCC CSSRLPGFLQTYGLHTVHGRALPAAIGLKIARPDLTVMAVGGDGDFFSIGLGHLPHAARR CHHHCCHHHHHHCCCEECCCCCHHHHCEEEECCCEEEEEECCCCCEEEECCCCCCHHHHC DLDMTVIVMDNAIYGLTKGQTSPTSPRGHVTKSTPYGQSAQPLHPLAIVLSSGASFVARG CCCEEEEEECCCEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHCCHHHHHHC FSSQPKQLAELIKAGLEHRGFAFIHVLSPCVTFYDTYKLYKELVYNLPDSHDPSDLDAAM CCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH RYAIESERLPLGIFFRRPPLEPLPRPTPKPFDTQEYLNRFRV HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]