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The map label for this gene is psd [H]

Identifier: 222524285

GI number: 222524285

Start: 1286367

End: 1287035

Strand: Direct

Name: psd [H]

Synonym: Chy400_1008

Alternate gene names: 222524285

Gene position: 1286367-1287035 (Clockwise)

Preceding gene: 222524283

Following gene: 222524286

Centisome position: 24.41

GC content: 61.14

Gene sequence:

>669_bases
ATGTCAGAGCCGACAACTAATCAGCGTCAACCTGCACTACCTGGTCTTGATGTCGAGGCAACGACTGTTGTCGGGATCGG
CCTGGGCCTCACCGGTCTTGCGCTTGGTCTGCGACCGCGACTGGCACCGGCCACGCTGGCTCTGACGGCGCTGGCAGCGG
CACTCTTCCGCAATCCGCGGCGTATTCCACCCGATGAACCACGTACCATTTTTGCCGTGGCCGATGGGCACGTGCAAGGG
GTACGTGAAGTCTACGAGCACCGCTTCGTCCACAGTGACTGTCTGCGGCTGACGACGATTATCGGTCCGCTCGATGTACC
AATCTGTCGTGCTCCCCTCGCCGGTCGTGTTGCCTATCTTGAACAACTGACCGGCGATCATCGTCCGTTACGTGATCCCC
AGGCGGCTGAGCGCAACCAACGGCTGTATATCGGCCTGGAGACAACCTGGGGGCCGATGCTGATCGCTATCGTTGCCGCA
CCGCTGGGGCGCTGGTTGCGCTGCGAAACGTCTCTGGGTGCAACACTGAACCCCGGTACCCGGATCGCCAGTGTGCGGTT
TGGTGGCCAGGTTGATCTCTATGTGCAACGTGATGTCCTCGATCCGCTTGTGGCACCCGGTAATCGAATACTGGCCGGGC
GGAGCCGATTAGGAGCAGTGGTCGCCTGA

Upstream 100 bases:

>100_bases
AGGGGCCTTCTAGTCGCCGTGAGGTTTGCGCGGGTCGCTCATTCATGCTAGAATCATGCTACAGTTCGTCTACATTCATT
TTGTTCTGTCGGGTGAACGT

Downstream 100 bases:

>100_bases
CCAGGTTGCATGATCGCACCGTTTACCCTCTTATTTGAAGAAGAGCCAAACCCCGGTCCAGGGTTGCCGGAAGCAATGCG
GGCTGTGTACAACGGGGATT

Product: phosphatidylserine decarboxylase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSEPTTNQRQPALPGLDVEATTVVGIGLGLTGLALGLRPRLAPATLALTALAAALFRNPRRIPPDEPRTIFAVADGHVQG
VREVYEHRFVHSDCLRLTTIIGPLDVPICRAPLAGRVAYLEQLTGDHRPLRDPQAAERNQRLYIGLETTWGPMLIAIVAA
PLGRWLRCETSLGATLNPGTRIASVRFGGQVDLYVQRDVLDPLVAPGNRILAGRSRLGAVVA

Sequences:

>Translated_222_residues
MSEPTTNQRQPALPGLDVEATTVVGIGLGLTGLALGLRPRLAPATLALTALAAALFRNPRRIPPDEPRTIFAVADGHVQG
VREVYEHRFVHSDCLRLTTIIGPLDVPICRAPLAGRVAYLEQLTGDHRPLRDPQAAERNQRLYIGLETTWGPMLIAIVAA
PLGRWLRCETSLGATLNPGTRIASVRFGGQVDLYVQRDVLDPLVAPGNRILAGRSRLGAVVA
>Mature_221_residues
SEPTTNQRQPALPGLDVEATTVVGIGLGLTGLALGLRPRLAPATLALTALAAALFRNPRRIPPDEPRTIFAVADGHVQGV
REVYEHRFVHSDCLRLTTIIGPLDVPICRAPLAGRVAYLEQLTGDHRPLRDPQAAERNQRLYIGLETTWGPMLIAIVAAP
LGRWLRCETSLGATLNPGTRIASVRFGGQVDLYVQRDVLDPLVAPGNRILAGRSRLGAVVA

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR004428 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 23891; Mature: 23760

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPTTNQRQPALPGLDVEATTVVGIGLGLTGLALGLRPRLAPATLALTALAAALFRNPR
CCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
RIPPDEPRTIFAVADGHVQGVREVYEHRFVHSDCLRLTTIIGPLDVPICRAPLAGRVAYL
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHH
EQLTGDHRPLRDPQAAERNQRLYIGLETTWGPMLIAIVAAPLGRWLRCETSLGATLNPGT
HHHCCCCCCCCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCCEECCCC
RIASVRFGGQVDLYVQRDVLDPLVAPGNRILAGRSRLGAVVA
EEEEEEECCEEEEEEECCHHHHHHCCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
SEPTTNQRQPALPGLDVEATTVVGIGLGLTGLALGLRPRLAPATLALTALAAALFRNPR
CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
RIPPDEPRTIFAVADGHVQGVREVYEHRFVHSDCLRLTTIIGPLDVPICRAPLAGRVAYL
CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHH
EQLTGDHRPLRDPQAAERNQRLYIGLETTWGPMLIAIVAAPLGRWLRCETSLGATLNPGT
HHHCCCCCCCCCCCHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHEEECCCCCCEECCCC
RIASVRFGGQVDLYVQRDVLDPLVAPGNRILAGRSRLGAVVA
EEEEEEECCEEEEEEECCHHHHHHCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA