| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524277
Identifier: 222524277
GI number: 222524277
Start: 1277859
End: 1278692
Strand: Direct
Name: 222524277
Synonym: Chy400_1000
Alternate gene names: NA
Gene position: 1277859-1278692 (Clockwise)
Preceding gene: 222524276
Following gene: 222524279
Centisome position: 24.25
GC content: 57.55
Gene sequence:
>834_bases ATGCGTCGCTGCCATCCAATCATCGTGGCACTAGCACTTATCTCTATGTGGGGAACACTCGTTGCAGCTACAACGACCCC TCCCGCTCCCGCTTCGCCACCACTACCCCTTATTCTCGGCGTCGAACGTATCTCACCAACGGCGTGGGCGGTGCTGTTGC ACTGCCCCTATCCTCCTTACGATCTGTATGTGTGGACCGGTAACTCGACAATTCAACGTCCAAAAGCACTCATTCGATTG GCAGAGGCGCGCTGGCAGGCCCAATTCGCCGGTGCGTTGCCAGAGATGGCAACACTGTATGGTTGTGGGCAACAAGCAGC ATTCGTCGTTGCCTATCCGACGATAGTGTCGCCATCAGAATGGATCGTAGGGATCGGTCTGGCAGGGGCAGGTGCGTGTG GGATGTGGTTGATGTGGCGAAGACGACCAAAACCGGCCCGACCGTCGGCTCCGGCGCCGATGCCAGCATGGAGTGTGTAT CTCCACGATGATCAGGGTGAGCGAACGATATCGCTGCCCCCCGGTCTCTTCTCTATCGGCAGTGATCCAGCCTGCCATCT GATCGTTCTTAGCGCAGACATTGCACTACGTCATGCGCACCTGATGGTGAGTGAAACCACTGTCCATATTGTCGATCTGG CCAGCCCTTCAGGTGTTTTTAGCGGGCCGGTACGGCAGCGGCTACGACCACATACCCCCGTACCTGTGGACAACAATGAC ATCTGGCTTGGCACCTCGGTACGTTTGCGCTTGTCTCGTGCACAAGTATCTCAGCCGCTATTCGACCACCCCTTGTCGGC TCACACCCAGAAAGACCGGCGGTCGCACCCGTAA
Upstream 100 bases:
>100_bases GTACAAATGCCTTTGCTCAATTTCTTTCAACAATGTGCGTAACCTTTGCCCTCCTCAACCGGTTTATATACAGAGCGTAT CATCGTATGAGGAGGGCTAT
Downstream 100 bases:
>100_bases CATCAAGCCGAGATCAACGAGGATGTGAATAAAAATAACCGTCCAGATGTCCTGATACAGGTAGAGGCAGAGGCTCCAAC CCAACACAAGCGCCATTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MRRCHPIIVALALISMWGTLVAATTTPPAPASPPLPLILGVERISPTAWAVLLHCPYPPYDLYVWTGNSTIQRPKALIRL AEARWQAQFAGALPEMATLYGCGQQAAFVVAYPTIVSPSEWIVGIGLAGAGACGMWLMWRRRPKPARPSAPAPMPAWSVY LHDDQGERTISLPPGLFSIGSDPACHLIVLSADIALRHAHLMVSETTVHIVDLASPSGVFSGPVRQRLRPHTPVPVDNND IWLGTSVRLRLSRAQVSQPLFDHPLSAHTQKDRRSHP
Sequences:
>Translated_277_residues MRRCHPIIVALALISMWGTLVAATTTPPAPASPPLPLILGVERISPTAWAVLLHCPYPPYDLYVWTGNSTIQRPKALIRL AEARWQAQFAGALPEMATLYGCGQQAAFVVAYPTIVSPSEWIVGIGLAGAGACGMWLMWRRRPKPARPSAPAPMPAWSVY LHDDQGERTISLPPGLFSIGSDPACHLIVLSADIALRHAHLMVSETTVHIVDLASPSGVFSGPVRQRLRPHTPVPVDNND IWLGTSVRLRLSRAQVSQPLFDHPLSAHTQKDRRSHP >Mature_277_residues MRRCHPIIVALALISMWGTLVAATTTPPAPASPPLPLILGVERISPTAWAVLLHCPYPPYDLYVWTGNSTIQRPKALIRL AEARWQAQFAGALPEMATLYGCGQQAAFVVAYPTIVSPSEWIVGIGLAGAGACGMWLMWRRRPKPARPSAPAPMPAWSVY LHDDQGERTISLPPGLFSIGSDPACHLIVLSADIALRHAHLMVSETTVHIVDLASPSGVFSGPVRQRLRPHTPVPVDNND IWLGTSVRLRLSRAQVSQPLFDHPLSAHTQKDRRSHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30181; Mature: 30181
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRCHPIIVALALISMWGTLVAATTTPPAPASPPLPLILGVERISPTAWAVLLHCPYPPY CCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCC DLYVWTGNSTIQRPKALIRLAEARWQAQFAGALPEMATLYGCGQQAAFVVAYPTIVSPSE EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCEECCCC WIVGIGLAGAGACGMWLMWRRRPKPARPSAPAPMPAWSVYLHDDQGERTISLPPGLFSIG EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEECC SDPACHLIVLSADIALRHAHLMVSETTVHIVDLASPSGVFSGPVRQRLRPHTPVPVDNND CCCCEEEEEEECCCEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCC IWLGTSVRLRLSRAQVSQPLFDHPLSAHTQKDRRSHP EEECCCEEEEEEHHHHCCCHHCCCCCCCCCCHHCCCC >Mature Secondary Structure MRRCHPIIVALALISMWGTLVAATTTPPAPASPPLPLILGVERISPTAWAVLLHCPYPPY CCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCC DLYVWTGNSTIQRPKALIRLAEARWQAQFAGALPEMATLYGCGQQAAFVVAYPTIVSPSE EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCEECCCC WIVGIGLAGAGACGMWLMWRRRPKPARPSAPAPMPAWSVYLHDDQGERTISLPPGLFSIG EEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCCCCEECC SDPACHLIVLSADIALRHAHLMVSETTVHIVDLASPSGVFSGPVRQRLRPHTPVPVDNND CCCCEEEEEEECCCEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCC IWLGTSVRLRLSRAQVSQPLFDHPLSAHTQKDRRSHP EEECCCEEEEEEHHHHCCCHHCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA