| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524184
Identifier: 222524184
GI number: 222524184
Start: 1139878
End: 1140396
Strand: Direct
Name: 222524184
Synonym: Chy400_0905
Alternate gene names: NA
Gene position: 1139878-1140396 (Clockwise)
Preceding gene: 222524182
Following gene: 222524185
Centisome position: 21.63
GC content: 64.55
Gene sequence:
>519_bases ATGCGTCGCCCCCTACCACGCCGACGACTAGCCACAAGCAACTCGCCAGTGGCACATCCGGTAACGCTTCTGCACGAGGA TGACACCCGAACCATGCACCTTGTTGAGCACGATTCGGTATGCGACGGTAGCCATGCCTGTGTCTCATCCATTCCGTCTG TCTTTACAGGGCGTGGAGAGGATACCCCCACCCCAGCCCGCCCCCGCTGGGGGCGGGAGTCATCGGCGCAAGCAGGTGGT GGGCGCGCCGGAGGCCGCGCTCCCAGGAGGGCGATAGGTCGTTTTCCGCTGTCCTGCTTGCTGTCCTTGTATCACCCCCA CCCCAACCCGCCCCCGCTGGGCTATGCATTACCCACATATCACGCTGCGTTAGGCTGGCTGCAAGTGCCCCCTGTGGCGG CTCCCCGTGGCGCAGGCTTCCAGCCTGCGTGCAGGCATCCTCGCCACCGCCGGCAGGTGCTGGCCGTGGCCGCTGGTGCG CAAGCACGAATCTCTTGCAACATAACCATCTACACGTAG
Upstream 100 bases:
>100_bases GGCGTCCTGATCGGACATCTGGCAGCATAGGTCATGACCGCCACCTGTTTCCCTGCTGCACGTGAACGATGCACCGCTAG ACGCTGGGTAGGGGCGACGC
Downstream 100 bases:
>100_bases GGGTCGCATGCATGCCTGACCGACTCGATGATCGAAACAAGCACATCCAACACCCTCGTGACCAGGATGGGTAACGGTGT ACCACGCGCCGGATCGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRRPLPRRRLATSNSPVAHPVTLLHEDDTRTMHLVEHDSVCDGSHACVSSIPSVFTGRGEDTPTPARPRWGRESSAQAGG GRAGGRAPRRAIGRFPLSCLLSLYHPHPNPPPLGYALPTYHAALGWLQVPPVAAPRGAGFQPACRHPRHRRQVLAVAAGA QARISCNITIYT
Sequences:
>Translated_172_residues MRRPLPRRRLATSNSPVAHPVTLLHEDDTRTMHLVEHDSVCDGSHACVSSIPSVFTGRGEDTPTPARPRWGRESSAQAGG GRAGGRAPRRAIGRFPLSCLLSLYHPHPNPPPLGYALPTYHAALGWLQVPPVAAPRGAGFQPACRHPRHRRQVLAVAAGA QARISCNITIYT >Mature_172_residues MRRPLPRRRLATSNSPVAHPVTLLHEDDTRTMHLVEHDSVCDGSHACVSSIPSVFTGRGEDTPTPARPRWGRESSAQAGG GRAGGRAPRRAIGRFPLSCLLSLYHPHPNPPPLGYALPTYHAALGWLQVPPVAAPRGAGFQPACRHPRHRRQVLAVAAGA QARISCNITIYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18574; Mature: 18574
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPLPRRRLATSNSPVAHPVTLLHEDDTRTMHLVEHDSVCDGSHACVSSIPSVFTGRGE CCCCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCC DTPTPARPRWGRESSAQAGGGRAGGRAPRRAIGRFPLSCLLSLYHPHPNPPPLGYALPTY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHH HAALGWLQVPPVAAPRGAGFQPACRHPRHRRQVLAVAAGAQARISCNITIYT HHHHCCEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEC >Mature Secondary Structure MRRPLPRRRLATSNSPVAHPVTLLHEDDTRTMHLVEHDSVCDGSHACVSSIPSVFTGRGE CCCCCCCHHHCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCC DTPTPARPRWGRESSAQAGGGRAGGRAPRRAIGRFPLSCLLSLYHPHPNPPPLGYALPTY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHH HAALGWLQVPPVAAPRGAGFQPACRHPRHRRQVLAVAAGAQARISCNITIYT HHHHCCEECCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA