| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is purN [H]
Identifier: 222523965
GI number: 222523965
Start: 845112
End: 845735
Strand: Direct
Name: purN [H]
Synonym: Chy400_0680
Alternate gene names: 222523965
Gene position: 845112-845735 (Clockwise)
Preceding gene: 222523964
Following gene: 222523968
Centisome position: 16.04
GC content: 60.1
Gene sequence:
>624_bases GTGCCAGGGATTGCAGTATTGTTGAGCGGCAGCGGGAGCAATTTGCAAGCGCTGCTTGATGCCCAGGCTGCCGGTGATCT GGCTGGTGAAGTGGTACTGGTCGCAAGTGACCGTGCTCAAGCTTACGGTCTGCAACGGGCATTGCAGGCCGGTGTGGCAG CGGCGTATATCCCTCTACGGGCAACGCGCGGCCCGCAGCGTCAGCAGTGGGAACAACGGCTGGCCGATATTGTCGCCTGT TTCGAGCCTGATCTGATCGTCCTCGCCGGCTTTATGCGGGTGCTTTCGGCAGCATTCCTTGAGCGGTTCCCTAACCGGGT GATTAATCAGCATCCCGCGCTCTTACCCGCGGATGGCGGCGATACCGTGACTACCACCAGTGGGTTGGTTATTCCGGCAT TGCGTGGTGCGCACGTGGTAGCCGATGCACTACGGCTCGGTTTGCCCGTTACCGGTTGTACCATCCATCGCGTGACACCG CGGGTGGATGATGGCCCAATTCTGGCCCGCGCTGAGGTTCCGATCCAACCCGATGACACGGTTGAGTCGCTGCACGAACG GATAAAGGCGGTCGAGCGACGATTGATTGTTGCCACCGTTAACCGCTTACTTGCCGGAGAGTGA
Upstream 100 bases:
>100_bases TTCAACCCTGCGCCAGGCGCGTGAACGGGCATACGCTGCTGCCGATCAGATTCGCTTTGAAGGCAAACATTTTCGCCGTG ACATCGGCCAGGAGTAGGTT
Downstream 100 bases:
>100_bases CCGGATACTACTACCGGTCACTCACCTCATTCGCGACGTAGCAACGCCAGCGTCAACATAATTCCGCCGGTGATCACGCC ACCAATCCCGATGAACAACA
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPGIAVLLSGSGSNLQALLDAQAAGDLAGEVVLVASDRAQAYGLQRALQAGVAAAYIPLRATRGPQRQQWEQRLADIVAC FEPDLIVLAGFMRVLSAAFLERFPNRVINQHPALLPADGGDTVTTTSGLVIPALRGAHVVADALRLGLPVTGCTIHRVTP RVDDGPILARAEVPIQPDDTVESLHERIKAVERRLIVATVNRLLAGE
Sequences:
>Translated_207_residues MPGIAVLLSGSGSNLQALLDAQAAGDLAGEVVLVASDRAQAYGLQRALQAGVAAAYIPLRATRGPQRQQWEQRLADIVAC FEPDLIVLAGFMRVLSAAFLERFPNRVINQHPALLPADGGDTVTTTSGLVIPALRGAHVVADALRLGLPVTGCTIHRVTP RVDDGPILARAEVPIQPDDTVESLHERIKAVERRLIVATVNRLLAGE >Mature_206_residues PGIAVLLSGSGSNLQALLDAQAAGDLAGEVVLVASDRAQAYGLQRALQAGVAAAYIPLRATRGPQRQQWEQRLADIVACF EPDLIVLAGFMRVLSAAFLERFPNRVINQHPALLPADGGDTVTTTSGLVIPALRGAHVVADALRLGLPVTGCTIHRVTPR VDDGPILARAEVPIQPDDTVESLHERIKAVERRLIVATVNRLLAGE
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=203, Percent_Identity=33.0049261083744, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI209869995, Length=203, Percent_Identity=33.0049261083744, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI209869993, Length=203, Percent_Identity=33.0049261083744, Blast_Score=123, Evalue=1e-28, Organism=Escherichia coli, GI1788846, Length=191, Percent_Identity=36.1256544502618, Blast_Score=120, Evalue=5e-29, Organism=Escherichia coli, GI1787483, Length=204, Percent_Identity=27.9411764705882, Blast_Score=83, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17567511, Length=192, Percent_Identity=35.4166666666667, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6320616, Length=224, Percent_Identity=33.0357142857143, Blast_Score=95, Evalue=7e-21, Organism=Drosophila melanogaster, GI24582400, Length=192, Percent_Identity=41.1458333333333, Blast_Score=124, Evalue=6e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 21924; Mature: 21792
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIAVLLSGSGSNLQALLDAQAAGDLAGEVVLVASDRAQAYGLQRALQAGVAAAYIPLR CCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHC ATRGPQRQQWEQRLADIVACFEPDLIVLAGFMRVLSAAFLERFPNRVINQHPALLPADGG CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC DTVTTTSGLVIPALRGAHVVADALRLGLPVTGCTIHRVTPRVDDGPILARAEVPIQPDDT CEEEECCCEEEHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHH VESLHERIKAVERRLIVATVNRLLAGE HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PGIAVLLSGSGSNLQALLDAQAAGDLAGEVVLVASDRAQAYGLQRALQAGVAAAYIPLR CCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHCHHHHHHHHC ATRGPQRQQWEQRLADIVACFEPDLIVLAGFMRVLSAAFLERFPNRVINQHPALLPADGG CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC DTVTTTSGLVIPALRGAHVVADALRLGLPVTGCTIHRVTPRVDDGPILARAEVPIQPDDT CEEEECCCEEEHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHH VESLHERIKAVERRLIVATVNRLLAGE HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3301838; 9205837; 9278503; 10954745; 2204419; 1522592; 1631098; 9698564; 10606510 [H]