| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523760
Identifier: 222523760
GI number: 222523760
Start: 565188
End: 565976
Strand: Reverse
Name: 222523760
Synonym: Chy400_0466
Alternate gene names: NA
Gene position: 565976-565188 (Counterclockwise)
Preceding gene: 222523761
Following gene: 222523758
Centisome position: 10.74
GC content: 54.5
Gene sequence:
>789_bases ATGCTGCGCTATCTCCGCCTGTTTGTTCTCTTTGTGCATAACAGTTTACAAATCGCGCTAGAGTATCGGGTCAACTTTTT GACCTCGCTCTTCCAAAGTGTGCTCTGGTTGTTGTGGGGTGTGCTGGGCACGCTGGTCTTTTTTCAATTTACCGGTACCC TCGGTGGCTGGACGCTGCCCCAGGCGCTGCTGGTGGTCGGCATGTTCCGCATTTTTGAGGGTTTGATTGACGGGATCATG CGGCCCAACATCACCCGGATCGTAGAACACATTCAAAAGGGAACGCTGGATTTTGTGCTGGTGAAGCCGGTTGATAGCCA GTTTATGGCGTCCCTGCGCCAGATCAATCTGATGGTGTTGCCTGATTTTCTGGTCGGCTTCGGTCTGATTATCTACGGTC TCTGGCTTGGTCAAATCTGGCCGACGCCATTCCAGCTCCTTGCCTTCCTCTTCTTGCTGGCCTGCGGTATGGTGATCGCG TATGCGATCTGGATGTTGCTGGTCACCACCGCCTTCTGGCTGGTACAGGTCGAGAATGTCACCGAGCTGCTCACTGCGAT CTATGAAACCGGTCGTTTTCCGGTGACAGCGTACAGCCAGTGGTTGCGTCTGGTGCTGACCTTCGTGATTCCGATTGCCT TTTTGACCACCTTTCCGGCGGCAGCCTTAATCGGCTTACTCGATCCCTTCTATCTGTTACTGGCGCCGATTATCGCCGGT ATCCTCTTGCTGGCGTCACGCGCTTTCTGGCGGGTTGGTCTGCGCTCGTATACCAGCGCTTCGTCGTAG
Upstream 100 bases:
>100_bases GTAATGAAGCAGAATGCACGTCAATTGTGGGATGTGGTTCGACGATTGACGTGCGTTCTGCGTTATCGTGATGTGTACCG ATTAGACAATCTGGCCGGTT
Downstream 100 bases:
>100_bases CGCTGCTGCGTCACCGCTGAACAACCCGCCGCTACCAACCGCTTACCCTCAGTCTGCGACCGCCAGGCCCAGGGCTTCAC GGGCTGCGCCGACGACGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLRYLRLFVLFVHNSLQIALEYRVNFLTSLFQSVLWLLWGVLGTLVFFQFTGTLGGWTLPQALLVVGMFRIFEGLIDGIM RPNITRIVEHIQKGTLDFVLVKPVDSQFMASLRQINLMVLPDFLVGFGLIIYGLWLGQIWPTPFQLLAFLFLLACGMVIA YAIWMLLVTTAFWLVQVENVTELLTAIYETGRFPVTAYSQWLRLVLTFVIPIAFLTTFPAAALIGLLDPFYLLLAPIIAG ILLLASRAFWRVGLRSYTSASS
Sequences:
>Translated_262_residues MLRYLRLFVLFVHNSLQIALEYRVNFLTSLFQSVLWLLWGVLGTLVFFQFTGTLGGWTLPQALLVVGMFRIFEGLIDGIM RPNITRIVEHIQKGTLDFVLVKPVDSQFMASLRQINLMVLPDFLVGFGLIIYGLWLGQIWPTPFQLLAFLFLLACGMVIA YAIWMLLVTTAFWLVQVENVTELLTAIYETGRFPVTAYSQWLRLVLTFVIPIAFLTTFPAAALIGLLDPFYLLLAPIIAG ILLLASRAFWRVGLRSYTSASS >Mature_262_residues MLRYLRLFVLFVHNSLQIALEYRVNFLTSLFQSVLWLLWGVLGTLVFFQFTGTLGGWTLPQALLVVGMFRIFEGLIDGIM RPNITRIVEHIQKGTLDFVLVKPVDSQFMASLRQINLMVLPDFLVGFGLIIYGLWLGQIWPTPFQLLAFLFLLACGMVIA YAIWMLLVTTAFWLVQVENVTELLTAIYETGRFPVTAYSQWLRLVLTFVIPIAFLTTFPAAALIGLLDPFYLLLAPIIAG ILLLASRAFWRVGLRSYTSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29679; Mature: 29679
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS01159 WW_DOMAIN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRYLRLFVLFVHNSLQIALEYRVNFLTSLFQSVLWLLWGVLGTLVFFQFTGTLGGWTLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QALLVVGMFRIFEGLIDGIMRPNITRIVEHIQKGTLDFVLVKPVDSQFMASLRQINLMVL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH PDFLVGFGLIIYGLWLGQIWPTPFQLLAFLFLLACGMVIAYAIWMLLVTTAFWLVQVENV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TELLTAIYETGRFPVTAYSQWLRLVLTFVIPIAFLTTFPAAALIGLLDPFYLLLAPIIAG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLLASRAFWRVGLRSYTSASS HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLRYLRLFVLFVHNSLQIALEYRVNFLTSLFQSVLWLLWGVLGTLVFFQFTGTLGGWTLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QALLVVGMFRIFEGLIDGIMRPNITRIVEHIQKGTLDFVLVKPVDSQFMASLRQINLMVL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH PDFLVGFGLIIYGLWLGQIWPTPFQLLAFLFLLACGMVIAYAIWMLLVTTAFWLVQVENV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TELLTAIYETGRFPVTAYSQWLRLVLTFVIPIAFLTTFPAAALIGLLDPFYLLLAPIIAG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLLASRAFWRVGLRSYTSASS HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA