| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hisA
Identifier: 222523665
GI number: 222523665
Start: 437956
End: 438681
Strand: Direct
Name: hisA
Synonym: Chy400_0371
Alternate gene names: 222523665
Gene position: 437956-438681 (Clockwise)
Preceding gene: 222523664
Following gene: 222523666
Centisome position: 8.31
GC content: 58.54
Gene sequence:
>726_bases ATGGAGATTATTCCGGCAATTGATATAAAAGATGGTCGCTGCGTCCGCTTGTATCAAGGCGATTTTGCCCAAATGACGGT CTACGCCGACGATCCGGTTGCGGTGGCCCGAAGCTGGGAAGCGCAAGGCGCCACCAGACTGCACCTGGTCGATCTCGACG GTGCCCGTGCCGGACACCCGCAGAATGTCGACGCCATTCTTGCTATCACACAGGCGGTGCAGATTCCAGTGCAGTTAGGC GGTGGTTTGCGCCGAGAGCAGGATGTTGAGTCGGCATTAGCCCTCGGCGTCGAGCGCGTTATCATCGGTACGGCGGCTAT TGCCGAAACAGACCTGGTTGCCCGCCTACTCGACCGCTTCGGCGAGCAGATCGTGATCGGGATCGATGCCCGCAACGGCC TGGTAGCTACCGATGGCTGGACAGTAACCTCTTCGGTCAAAGCAACCGTGCTGGCTGAACAGATGGCAAACCTCGGTGCC CGACGCATCATCTACACCGACATCAGTCGTGATGGCGCACTCAGTGGGCCGAACTTTGCAGCCTTAAGCGAATTGATCAC ACCGCACGGCCCGGCGATCATCGCCAGCGGCGGGATTGCCAGTATCGACCACGTGCGCCAGCTTGCCCAGCTCGGCGTTG AAGGAGCGATTATCGGCAAGGCATTGTACGTTGGTGCAGTAAAACTGGCTGAAGCGATGGCCGTTGCCCACATGACTAAT GTATAG
Upstream 100 bases:
>100_bases CAGTACAGTTCCATCCCGAAAAGAGTGGCGACTATGGCTTGCGCCTGCTGGCCAATTTCGTGCGCTGGAGCGAGGCCGTC CAGCCAAAAGGAGTGTGACA
Downstream 100 bases:
>100_bases CTACCGGGTGGGCATGCCAGAGCGATGGCAAGCTGTTTACCTGCAATACCACACAACCAGGAGTTGTTATGTCAAATTCA GACCTGACGGCGCGCTATGA
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MEIIPAIDIKDGRCVRLYQGDFAQMTVYADDPVAVARSWEAQGATRLHLVDLDGARAGHPQNVDAILAITQAVQIPVQLG GGLRREQDVESALALGVERVIIGTAAIAETDLVARLLDRFGEQIVIGIDARNGLVATDGWTVTSSVKATVLAEQMANLGA RRIIYTDISRDGALSGPNFAALSELITPHGPAIIASGGIASIDHVRQLAQLGVEGAIIGKALYVGAVKLAEAMAVAHMTN V
Sequences:
>Translated_241_residues MEIIPAIDIKDGRCVRLYQGDFAQMTVYADDPVAVARSWEAQGATRLHLVDLDGARAGHPQNVDAILAITQAVQIPVQLG GGLRREQDVESALALGVERVIIGTAAIAETDLVARLLDRFGEQIVIGIDARNGLVATDGWTVTSSVKATVLAEQMANLGA RRIIYTDISRDGALSGPNFAALSELITPHGPAIIASGGIASIDHVRQLAQLGVEGAIIGKALYVGAVKLAEAMAVAHMTN V >Mature_241_residues MEIIPAIDIKDGRCVRLYQGDFAQMTVYADDPVAVARSWEAQGATRLHLVDLDGARAGHPQNVDAILAITQAVQIPVQLG GGLRREQDVESALALGVERVIIGTAAIAETDLVARLLDRFGEQIVIGIDARNGLVATDGWTVTSSVKATVLAEQMANLGA RRIIYTDISRDGALSGPNFAALSELITPHGPAIIASGGIASIDHVRQLAQLGVEGAIIGKALYVGAVKLAEAMAVAHMTN V
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=240, Percent_Identity=40, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788336, Length=244, Percent_Identity=24.5901639344262, Blast_Score=81, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_CHLAA (A9WD26)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001633984.1 - ProteinModelPortal: A9WD26 - SMR: A9WD26 - GeneID: 5827957 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_0344 - HOGENOM: HBG541613 - OMA: SIIYTDI - ProtClustDB: PRK00748 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25274; Mature: 25274
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIIPAIDIKDGRCVRLYQGDFAQMTVYADDPVAVARSWEAQGATRLHLVDLDGARAGHP CCCCCCEECCCCCEEEEEECCCEEEEEEECCCEEEHCCCCCCCCEEEEEEECCCCCCCCC QNVDAILAITQAVQIPVQLGGGLRREQDVESALALGVERVIIGTAAIAETDLVARLLDRF CCCHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEQIVIGIDARNGLVATDGWTVTSSVKATVLAEQMANLGARRIIYTDISRDGALSGPNFA CCEEEEEEECCCCEEEECCEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH ALSELITPHGPAIIASGGIASIDHVRQLAQLGVEGAIIGKALYVGAVKLAEAMAVAHMTN HHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC V C >Mature Secondary Structure MEIIPAIDIKDGRCVRLYQGDFAQMTVYADDPVAVARSWEAQGATRLHLVDLDGARAGHP CCCCCCEECCCCCEEEEEECCCEEEEEEECCCEEEHCCCCCCCCEEEEEEECCCCCCCCC QNVDAILAITQAVQIPVQLGGGLRREQDVESALALGVERVIIGTAAIAETDLVARLLDRF CCCHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEQIVIGIDARNGLVATDGWTVTSSVKATVLAEQMANLGARRIIYTDISRDGALSGPNFA CCEEEEEEECCCCEEEECCEEEECHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH ALSELITPHGPAIIASGGIASIDHVRQLAQLGVEGAIIGKALYVGAVKLAEAMAVAHMTN HHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA