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The map label for this gene is merR1 [H]

Identifier: 222523315

GI number: 222523315

Start: 15234

End: 15635

Strand: Reverse

Name: merR1 [H]

Synonym: Chy400_0013

Alternate gene names: 222523315

Gene position: 15635-15234 (Counterclockwise)

Preceding gene: 222523319

Following gene: 222523312

Centisome position: 0.3

GC content: 55.47

Gene sequence:

>402_bases
ATGATGCGTATTGGTGAACTTGCCCGCCAAACCGGTGTGTCGGTTAAAACCATTCGTTTTTACGAGCAGATTGGGGTGTT
GCCACCCCCGCCGCGGATGGAGAACAATTATCGGTTCTACTCACCAGACATGGTTGACCGCTTACGTTTCATTACCCATG
CGCGCAGTCTGGGTCTGTCATTACGCGAGATTGCTGCTATTCTCGCGCTAAGTGATCGCGGCGAACCCCCGTGCGGTGAG
ATGCTTGCCTCCCTGGATCGGCAAATTGCAGCTATCGATCAGCGCATTGCCGATCTTCAGGAACTTCGTACTGCGCTGAT
CGATCTTCGTCAGCGCGGCAATCAGGCCGCGACACCCTGGACCGATTGCATCTGTGCGCTGGTGCGTGATCGCCAGGTAT
GA

Upstream 100 bases:

>100_bases
TACCAGGTGCGGGTGTGAAGGTATCAGGTGTGTTCTCGTCACGATCATCCGGCTTATCGATGACCTCTCCTGATAGGTCA
ATGCTCTTTTGAGGTGCGTG

Downstream 100 bases:

>100_bases
GCGATCCCGCCTTTATTCCTCTACCTTCCACGTGCCGACGACCGTGCGCGTTGGCGTTGGTAAGCGGATCGACAACAAAC
CGGCGATTAAAATGAAACCA

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MMRIGELARQTGVSVKTIRFYEQIGVLPPPPRMENNYRFYSPDMVDRLRFITHARSLGLSLREIAAILALSDRGEPPCGE
MLASLDRQIAAIDQRIADLQELRTALIDLRQRGNQAATPWTDCICALVRDRQV

Sequences:

>Translated_133_residues
MMRIGELARQTGVSVKTIRFYEQIGVLPPPPRMENNYRFYSPDMVDRLRFITHARSLGLSLREIAAILALSDRGEPPCGE
MLASLDRQIAAIDQRIADLQELRTALIDLRQRGNQAATPWTDCICALVRDRQV
>Mature_133_residues
MMRIGELARQTGVSVKTIRFYEQIGVLPPPPRMENNYRFYSPDMVDRLRFITHARSLGLSLREIAAILALSDRGEPPCGE
MLASLDRQIAAIDQRIADLQELRTALIDLRQRGNQAATPWTDCICALVRDRQV

Specific function: Mediates the mercuric-dependent induction of mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a pote

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=131, Percent_Identity=34.3511450381679, Blast_Score=75, Evalue=1e-15,
Organism=Escherichia coli, GI1786695, Length=108, Percent_Identity=32.4074074074074, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR011794
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15095; Mature: 15095

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRIGELARQTGVSVKTIRFYEQIGVLPPPPRMENNYRFYSPDMVDRLRFITHARSLGLS
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCC
LREIAAILALSDRGEPPCGEMLASLDRQIAAIDQRIADLQELRTALIDLRQRGNQAATPW
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TDCICALVRDRQV
HHHHHHHHHHCCC
>Mature Secondary Structure
MMRIGELARQTGVSVKTIRFYEQIGVLPPPPRMENNYRFYSPDMVDRLRFITHARSLGLS
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCC
LREIAAILALSDRGEPPCGEMLASLDRQIAAIDQRIADLQELRTALIDLRQRGNQAATPW
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
TDCICALVRDRQV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2536669; 10559175; 2492496; 2305262 [H]