| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is nudE [C]
Identifier: 222152064
GI number: 222152064
Start: 1956695
End: 1957234
Strand: Direct
Name: nudE [C]
Synonym: MCCL_1821
Alternate gene names: 222152064
Gene position: 1956695-1957234 (Clockwise)
Preceding gene: 222152059
Following gene: 222152077
Centisome position: 93.07
GC content: 34.81
Gene sequence:
>540_bases ATGTGGGTAAAAAGAAAATTAATAGGAAAACAAGATTATAAGATTTTTAAAGTCATGACCACTCAATTTAGCTATAACTC AAATACTGCTGAATTCTATCAGATCGAGGCACCACATTGGATTAATATTATCGCACGATGTAAAGATGATATCATTATGA TTCATCAGTATAGAATCGGTATCGAAGATTACAGTTTAGAGTTACCTGGAGGAATTATAGAAGAACAAGATGTTATCGCA GCTGGAATGCGAGAGCTTGAAGAAGAAACAGGGTATACAGGTACGCCTGAAATCATTGGTACGATGCATCCTAACCCAGC ACTTTTTACAAACCAACTCTATACGTTATATGTAAAGGATGCGTATTATATAGCCGCAAATCAACTAGAAACATTTGAAG ATATCAATGTATATCATATGCCCTTATCAGAAATATACAGAAAAATAGCGCACGGTAAAATTACCAATGCGCTGACACTT GCGAGTTTGATGCAATTAATCTCGAGATACCCTCATTTGTTTGACTGTAGTAATGAATAA
Upstream 100 bases:
>100_bases ATTCCATATCAAATATTATCGCTTTAACCATATTACCCCTCCATTAGCAGTATTATACCCTATCTGATACACTGTTATCA TATACAAAGGGGGGAAAACG
Downstream 100 bases:
>100_bases TAAAGGTAATCCAATGAGACACATCATAATACTCACTGGGATTTGTACAGGAGGCACGATAACTTTTCCCAGGAAATCTC CAAGCAATATAAGTATAGTG
Product: hypothetical protein
Products: AMP; D-Ribose 5- Phosphate. [C]
Alternate protein names: Hydrolase NUDIX Family; NUDIX/MutT-Family Protein; Hydrolase Protein; Nudix Hydrolase; MutT/NUDIX Family Protein; Phosphohydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; MutT/Nudix Family Phosphohydrolase; Phosphohydrolase MutT/NUDIX Family; Nudix/MutT Family Protein
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIGIEDYSLELPGGIIEEQDVIA AGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKDAYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTL ASLMQLISRYPHLFDCSNE
Sequences:
>Translated_179_residues MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIGIEDYSLELPGGIIEEQDVIA AGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKDAYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTL ASLMQLISRYPHLFDCSNE >Mature_179_residues MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIGIEDYSLELPGGIIEEQDVIA AGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKDAYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTL ASLMQLISRYPHLFDCSNE
Specific function: Active On Adenosine(5')Triphospho(5')Adenosine (Ap3a), ADP-Ribose, NADH, Adenosine(5')Diphospho(5')Adenosine (Ap2a). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 20781; Mature: 20781
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIG CCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEEC IEDYSLELPGGIIEEQDVIAAGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKD CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCEEEEEEEC AYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTLASLMQLISRYPHLFDCSNE EEEEECCCCCHHHCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIG CCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEEC IEDYSLELPGGIIEEQDVIAAGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKD CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCEEEEEEEC AYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTLASLMQLISRYPHLFDCSNE EEEEECCCCCHHHCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ADP-Ribose; H2O [C]
Specific reaction: ADP-Ribose + H2O = AMP + D-Ribose 5- Phosphate. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA