Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

Click here to switch to the map view.

The map label for this gene is nudE [C]

Identifier: 222152064

GI number: 222152064

Start: 1956695

End: 1957234

Strand: Direct

Name: nudE [C]

Synonym: MCCL_1821

Alternate gene names: 222152064

Gene position: 1956695-1957234 (Clockwise)

Preceding gene: 222152059

Following gene: 222152077

Centisome position: 93.07

GC content: 34.81

Gene sequence:

>540_bases
ATGTGGGTAAAAAGAAAATTAATAGGAAAACAAGATTATAAGATTTTTAAAGTCATGACCACTCAATTTAGCTATAACTC
AAATACTGCTGAATTCTATCAGATCGAGGCACCACATTGGATTAATATTATCGCACGATGTAAAGATGATATCATTATGA
TTCATCAGTATAGAATCGGTATCGAAGATTACAGTTTAGAGTTACCTGGAGGAATTATAGAAGAACAAGATGTTATCGCA
GCTGGAATGCGAGAGCTTGAAGAAGAAACAGGGTATACAGGTACGCCTGAAATCATTGGTACGATGCATCCTAACCCAGC
ACTTTTTACAAACCAACTCTATACGTTATATGTAAAGGATGCGTATTATATAGCCGCAAATCAACTAGAAACATTTGAAG
ATATCAATGTATATCATATGCCCTTATCAGAAATATACAGAAAAATAGCGCACGGTAAAATTACCAATGCGCTGACACTT
GCGAGTTTGATGCAATTAATCTCGAGATACCCTCATTTGTTTGACTGTAGTAATGAATAA

Upstream 100 bases:

>100_bases
ATTCCATATCAAATATTATCGCTTTAACCATATTACCCCTCCATTAGCAGTATTATACCCTATCTGATACACTGTTATCA
TATACAAAGGGGGGAAAACG

Downstream 100 bases:

>100_bases
TAAAGGTAATCCAATGAGACACATCATAATACTCACTGGGATTTGTACAGGAGGCACGATAACTTTTCCCAGGAAATCTC
CAAGCAATATAAGTATAGTG

Product: hypothetical protein

Products: AMP; D-Ribose 5- Phosphate. [C]

Alternate protein names: Hydrolase NUDIX Family; NUDIX/MutT-Family Protein; Hydrolase Protein; Nudix Hydrolase; MutT/NUDIX Family Protein; Phosphohydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; MutT/Nudix Family Phosphohydrolase; Phosphohydrolase MutT/NUDIX Family; Nudix/MutT Family Protein

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIGIEDYSLELPGGIIEEQDVIA
AGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKDAYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTL
ASLMQLISRYPHLFDCSNE

Sequences:

>Translated_179_residues
MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIGIEDYSLELPGGIIEEQDVIA
AGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKDAYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTL
ASLMQLISRYPHLFDCSNE
>Mature_179_residues
MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIGIEDYSLELPGGIIEEQDVIA
AGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKDAYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTL
ASLMQLISRYPHLFDCSNE

Specific function: Active On Adenosine(5')Triphospho(5')Adenosine (Ap3a), ADP-Ribose, NADH, Adenosine(5')Diphospho(5')Adenosine (Ap2a). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 20781; Mature: 20781

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIG
CCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEEC
IEDYSLELPGGIIEEQDVIAAGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKD
CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCEEEEEEEC
AYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTLASLMQLISRYPHLFDCSNE
EEEEECCCCCHHHCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MWVKRKLIGKQDYKIFKVMTTQFSYNSNTAEFYQIEAPHWINIIARCKDDIIMIHQYRIG
CCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEEEC
IEDYSLELPGGIIEEQDVIAAGMRELEEETGYTGTPEIIGTMHPNPALFTNQLYTLYVKD
CCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCEEEEEEEC
AYYIAANQLETFEDINVYHMPLSEIYRKIAHGKITNALTLASLMQLISRYPHLFDCSNE
EEEEECCCCCHHHCCCEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP-Ribose; H2O [C]

Specific reaction: ADP-Ribose + H2O = AMP + D-Ribose 5- Phosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA