Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ywpF [H]

Identifier: 222151996

GI number: 222151996

Start: 1892655

End: 1893086

Strand: Direct

Name: ywpF [H]

Synonym: MCCL_1753

Alternate gene names: 222151996

Gene position: 1892655-1893086 (Clockwise)

Preceding gene: 222151987

Following gene: 222152024

Centisome position: 90.03

GC content: 35.65

Gene sequence:

>432_bases
ATGAAAACGTTCAAAGCAGTTCGATTTCAACTCGTTGAAGATGAAGCGATCAAAGAATATATGTTGTATGATGGCGTAAT
AATAAACAAAGAGAATAGCGGTACAGGCTGGCTACTTGAAATATTGATAGATGAAATTCATCTGGAGACGATGGAAACGT
ATATGCATAACGAAACCATTCTTGATACACGTGTAGTTATTACCCGTGCCTCCAATGACCCTGCGATGTTCGAGTCTACA
ATTAAGGACATCCAGAAGTTGAATGATAAGATTTCTGTAATTTTCGAATGCCATATTTACACGTTGAGACAGACATATGC
AGAAAAGCTATTAGAGCAATTAGTAAATGAAGGTCTATCTGGTCAGGCTCTAATCACTGCATTTAATAGAAAGATGCAGT
CAAAACCAAAATTAAAAGATGAAAATGAATAA

Upstream 100 bases:

>100_bases
AAAATATAACAAAAAATATCTTAAAATTAACGTAATTATTTAAATATTGTAATTTGAAAAATTTATTCAAAGAATTATAA
TAGATAATGGAGGGATATAC

Downstream 100 bases:

>100_bases
TAAATAAACAAAAAATAACACCCAAACGATACAGAAAAACTATCGCTCAGATGTTATTATTTTGCTGTTCTAATTTACTT
ACTTCTCGATGATCGCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKTFKAVRFQLVEDEAIKEYMLYDGVIINKENSGTGWLLEILIDEIHLETMETYMHNETILDTRVVITRASNDPAMFEST
IKDIQKLNDKISVIFECHIYTLRQTYAEKLLEQLVNEGLSGQALITAFNRKMQSKPKLKDENE

Sequences:

>Translated_143_residues
MKTFKAVRFQLVEDEAIKEYMLYDGVIINKENSGTGWLLEILIDEIHLETMETYMHNETILDTRVVITRASNDPAMFEST
IKDIQKLNDKISVIFECHIYTLRQTYAEKLLEQLVNEGLSGQALITAFNRKMQSKPKLKDENE
>Mature_143_residues
MKTFKAVRFQLVEDEAIKEYMLYDGVIINKENSGTGWLLEILIDEIHLETMETYMHNETILDTRVVITRASNDPAMFEST
IKDIQKLNDKISVIFECHIYTLRQTYAEKLLEQLVNEGLSGQALITAFNRKMQSKPKLKDENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16632; Mature: 16632

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFKAVRFQLVEDEAIKEYMLYDGVIINKENSGTGWLLEILIDEIHLETMETYMHNETI
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
LDTRVVITRASNDPAMFESTIKDIQKLNDKISVIFECHIYTLRQTYAEKLLEQLVNEGLS
EEEEEEEEECCCCHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
GQALITAFNRKMQSKPKLKDENE
CCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTFKAVRFQLVEDEAIKEYMLYDGVIINKENSGTGWLLEILIDEIHLETMETYMHNETI
CCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
LDTRVVITRASNDPAMFESTIKDIQKLNDKISVIFECHIYTLRQTYAEKLLEQLVNEGLS
EEEEEEEEECCCCHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
GQALITAFNRKMQSKPKLKDENE
CCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]