| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is yfkF [H]
Identifier: 222151893
GI number: 222151893
Start: 1787562
End: 1788728
Strand: Direct
Name: yfkF [H]
Synonym: MCCL_1650
Alternate gene names: 222151893
Gene position: 1787562-1788728 (Clockwise)
Preceding gene: 222151882
Following gene: 222151894
Centisome position: 85.03
GC content: 38.73
Gene sequence:
>1167_bases ATGTTCAAGAAAAATTTCATCATTTTATCTATCATCGTATCAATTTCCGGAATGACTCAAGGGATGCTGTTGCCGCTCAT CGCGATTATCTTCGAACACGATAATGTATCGACATTCGTCAACGGACTTCACGCTTCTTCCATATACATCGGAGTCTTTT TAGCATCATTATTCTTAGAAGGATTACTTAGGAAGTTCGGCTATAAGAACCTTATTATTATAGGCGGAGCTATCATCTTC TTATCACTCGGATTATTTCCGATACTTGAGAATATGACAATCTGGTTCATATTACGATTGCTCGTCGGGGTTGGAGATAA TATGCTGCACTTCTCGACACAATCATGGCTTACAGAATCAACACCGAGACATAAACTCGGTCGTATTATTTCAATCTACG GATTAAGTTTTTCAGCTGGCTTTATGGTCGGACCGTTATTATCTAAACTATATGATATACATGAAGCACTGCCTTTTGTA GCAAGCAGTATACTCACACTATGCGCCTGCAGTTTAATACTATTACTGAAAAACCAGTATCCTGAAGTTCAGACATCGAA CATTTCACTTAAAAACACAACTGCAAACTTTGGCAAGGTGATGAAGACGAGCTGGGTCGCATTCTTATTTCCTATGATGT ATGGTGTGCTGGAAGCATGTTTAAACAGCAATTTCCCAGTCTTCGCTATGAAAAATGGCGTCGATGTAAACTTAATCATC TTAATCATCCCTGCATACAGTCTAGGTGCGATTCTGTTCCAGGTACCACTCGGTATGATTTCAGATAAGGTTAATCGTAA TGTGCTGTTATCCATCGTGACATTTGTCGGTGCGTGTATCTTTATATTATGTCAATTCTTTACAAGTAATGGTTATGTAT TACTTACGCTTTTCTTCATCGCCGGAATCTTTATCGGGTCACTTTATTCACTAGGCGTGACATTGATGACAGAAATTACA CCGAAAGTATTACTGCCAGCAGGAAATTTAATGTGTGGTCTCATATTCAGTATCGGTAGTATTACAGGACCGATCATCGG TGGGATGACGATTCAGTTCTCGCATAACACACAATTTTTCAGCTTTATTGCTGTCATACTCTTACTCATCAGTATGGCTA CAATTTACGATTACAGAAAACGACTGACAATTAGAAATGAGGGATGA
Upstream 100 bases:
>100_bases CTCCCCTATTCAAAAGCTCATATTAATTTCATATTACCATAGTGAATTCATTTAGGCATCGCTTTAACATTCTGTTACAA TTAATGTAAGGAGGCATCAT
Downstream 100 bases:
>100_bases CATGGTCATCAATGAAGCAAAAGCTTTCATAACACAATTCTATAAAGAACAGTGCTTCAGCGAACAATTAATGAAAGCAC GTATTAAAGACGTAGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLEGLLRKFGYKNLIIIGGAIIF LSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTESTPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFV ASSILTLCACSLILLLKNQYPEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFIAGIFIGSLYSLGVTLMTEIT PKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFFSFIAVILLLISMATIYDYRKRLTIRNEG
Sequences:
>Translated_388_residues MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLEGLLRKFGYKNLIIIGGAIIF LSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTESTPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFV ASSILTLCACSLILLLKNQYPEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFIAGIFIGSLYSLGVTLMTEIT PKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFFSFIAVILLLISMATIYDYRKRLTIRNEG >Mature_388_residues MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLEGLLRKFGYKNLIIIGGAIIF LSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTESTPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFV ASSILTLCACSLILLLKNQYPEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFIAGIFIGSLYSLGVTLMTEIT PKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFFSFIAVILLLISMATIYDYRKRLTIRNEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42719; Mature: 42719
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLE CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLLRKFGYKNLIIIGGAIIFLSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTES HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCC TPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFVASSILTLCACSLILLLKNQY CCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEE LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFI EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGIFIGSLYSLGVTLMTEITPKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFF HHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHCCHHHCCEEEEEECCCHHH SFIAVILLLISMATIYDYRKRLTIRNEG HHHHHHHHHHHHHHHHHHHHHEEECCCC >Mature Secondary Structure MFKKNFIILSIIVSISGMTQGMLLPLIAIIFEHDNVSTFVNGLHASSIYIGVFLASLFLE CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLLRKFGYKNLIIIGGAIIFLSLGLFPILENMTIWFILRLLVGVGDNMLHFSTQSWLTES HHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHCC TPRHKLGRIISIYGLSFSAGFMVGPLLSKLYDIHEALPFVASSILTLCACSLILLLKNQY CCHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PEVQTSNISLKNTTANFGKVMKTSWVAFLFPMMYGVLEACLNSNFPVFAMKNGVDVNLII CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEE LIIPAYSLGAILFQVPLGMISDKVNRNVLLSIVTFVGACIFILCQFFTSNGYVLLTLFFI EEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH AGIFIGSLYSLGVTLMTEITPKVLLPAGNLMCGLIFSIGSITGPIIGGMTIQFSHNTQFF HHHHHHHHHHHHHHHHHHCCCHHEECCCHHHHHHHHHHHHHCCHHHCCEEEEEECCCHHH SFIAVILLLISMATIYDYRKRLTIRNEG HHHHHHHHHHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]