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The map label for this gene is ygaE [H]

Identifier: 222151838

GI number: 222151838

Start: 1728379

End: 1729461

Strand: Direct

Name: ygaE [H]

Synonym: MCCL_1595

Alternate gene names: 222151838

Gene position: 1728379-1729461 (Clockwise)

Preceding gene: 222151837

Following gene: 222151843

Centisome position: 82.21

GC content: 36.38

Gene sequence:

>1083_bases
ATGAAATTAGGTGCACGTATATTCAAAACTGGAATTGCTATTATCGTTGCCTTGTTAATCGCACATCAAATCAATGGACA
AGGCGCAATCGTTGCTGGTATCTCGGCATTATTTGCAATGCAACCCAATGTGTACAGATCATATAAAACGATCATCGAAC
AATTTCAAGGAAACTTAATAGGTGCTGTACTTGCAATAATCATGGCTTCTTTATTTGGTTTTCATATCGTCATTATCGGC
ATTACTTCTATTATGCTGATTTCAATATTACAGAAAGTCAACCTTTCACATGTCACAGGTCTTGCTGTAGTCACTCAGCT
TATTATTATGGATCACCAGGACGGTGCGTTCCTGGAATCTGCTGTTTTAAGATTTACGTTCGTTATGATTGGAGTAATCA
GTGCGTTTGTCGTGAACACATTATTTTTGCCACCTAAATTCGAAAGTAAGATTTATTATCAATGTTTGAGTATCTCGAGT
GATATTTTCAAGTGGATTCGTCTAGAAATTAATGGCTCAACAGAATTCCATGCAGTAAAAAGAGATATAGATAACATCCG
CAGTCGTATCGAGAAACTTGAAGAACAGTATAACTTGTATAAAGAAGAACGTGCATACACGAAACAAGGCAGTATTCGGA
ATCTACGCAAAAAGATCATCTTTAAAGAGACTGTACTGGCAACGCGTCGCGCCTATGATGTACTGCGCAAAATGCATAGA
TACGAAAATGATGTCATTAATTTGCCGGAAGAACTAAAAGTTCAGATTAAATTTGAACTCGATGAATTAATGACACTACA
TGAAGAGCTGCTTATGCGGATATCAAAGAAAGTGCCCGCTACAAAACATGACTGTCAAACCGGGATAACCGAACCTTATA
AGCTCAATATCATGGATGCATTTCTTGAAGAAATCAACACGACACCAAGTGATGCATATAGTAAGGAACATATATTTGTA
ATTATCGGGACACTATTTGATTATCGTGATAAACTCGAACACCTTGATCGTATTACACATAGCTTCTATAAGTTTCATAA
AGAGGATAAGAAATTCAGAATCGAACATAGTGAAGAGTTATAA

Upstream 100 bases:

>100_bases
CACTAATCGCAGTTGAAAACAGTTTCAAACAAATGTAGCTTGAAAAAGTATGCAATGTCATGTATAAGTGTACTAACGAA
TAAATAAATGAGGTCAAAAT

Downstream 100 bases:

>100_bases
TTTGTTCAACATAAAGGGGAGTGCGAAATCGCACTCCCTTTTATGTTATTGCCAACCATTATTCTCTTCTACCACGACTT
TATCTTTTGATACGTGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKLGARIFKTGIAIIVALLIAHQINGQGAIVAGISALFAMQPNVYRSYKTIIEQFQGNLIGAVLAIIMASLFGFHIVIIG
ITSIMLISILQKVNLSHVTGLAVVTQLIIMDHQDGAFLESAVLRFTFVMIGVISAFVVNTLFLPPKFESKIYYQCLSISS
DIFKWIRLEINGSTEFHAVKRDIDNIRSRIEKLEEQYNLYKEERAYTKQGSIRNLRKKIIFKETVLATRRAYDVLRKMHR
YENDVINLPEELKVQIKFELDELMTLHEELLMRISKKVPATKHDCQTGITEPYKLNIMDAFLEEINTTPSDAYSKEHIFV
IIGTLFDYRDKLEHLDRITHSFYKFHKEDKKFRIEHSEEL

Sequences:

>Translated_360_residues
MKLGARIFKTGIAIIVALLIAHQINGQGAIVAGISALFAMQPNVYRSYKTIIEQFQGNLIGAVLAIIMASLFGFHIVIIG
ITSIMLISILQKVNLSHVTGLAVVTQLIIMDHQDGAFLESAVLRFTFVMIGVISAFVVNTLFLPPKFESKIYYQCLSISS
DIFKWIRLEINGSTEFHAVKRDIDNIRSRIEKLEEQYNLYKEERAYTKQGSIRNLRKKIIFKETVLATRRAYDVLRKMHR
YENDVINLPEELKVQIKFELDELMTLHEELLMRISKKVPATKHDCQTGITEPYKLNIMDAFLEEINTTPSDAYSKEHIFV
IIGTLFDYRDKLEHLDRITHSFYKFHKEDKKFRIEHSEEL
>Mature_360_residues
MKLGARIFKTGIAIIVALLIAHQINGQGAIVAGISALFAMQPNVYRSYKTIIEQFQGNLIGAVLAIIMASLFGFHIVIIG
ITSIMLISILQKVNLSHVTGLAVVTQLIIMDHQDGAFLESAVLRFTFVMIGVISAFVVNTLFLPPKFESKIYYQCLSISS
DIFKWIRLEINGSTEFHAVKRDIDNIRSRIEKLEEQYNLYKEERAYTKQGSIRNLRKKIIFKETVLATRRAYDVLRKMHR
YENDVINLPEELKVQIKFELDELMTLHEELLMRISKKVPATKHDCQTGITEPYKLNIMDAFLEEINTTPSDAYSKEHIFV
IIGTLFDYRDKLEHLDRITHSFYKFHKEDKKFRIEHSEEL

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0421 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343 [H]

Pfam domain/function: PF06081 DUF939 [H]

EC number: NA

Molecular weight: Translated: 41531; Mature: 41531

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGARIFKTGIAIIVALLIAHQINGQGAIVAGISALFAMQPNVYRSYKTIIEQFQGNLI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
GAVLAIIMASLFGFHIVIIGITSIMLISILQKVNLSHVTGLAVVTQLIIMDHQDGAFLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHH
AVLRFTFVMIGVISAFVVNTLFLPPKFESKIYYQCLSISSDIFKWIRLEINGSTEFHAVK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH
RDIDNIRSRIEKLEEQYNLYKEERAYTKQGSIRNLRKKIIFKETVLATRRAYDVLRKMHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YENDVINLPEELKVQIKFELDELMTLHEELLMRISKKVPATKHDCQTGITEPYKLNIMDA
HCCHHCCCCHHHEEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHH
FLEEINTTPSDAYSKEHIFVIIGTLFDYRDKLEHLDRITHSFYKFHKEDKKFRIEHSEEL
HHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MKLGARIFKTGIAIIVALLIAHQINGQGAIVAGISALFAMQPNVYRSYKTIIEQFQGNLI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
GAVLAIIMASLFGFHIVIIGITSIMLISILQKVNLSHVTGLAVVTQLIIMDHQDGAFLES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCHHHHH
AVLRFTFVMIGVISAFVVNTLFLPPKFESKIYYQCLSISSDIFKWIRLEINGSTEFHAVK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH
RDIDNIRSRIEKLEEQYNLYKEERAYTKQGSIRNLRKKIIFKETVLATRRAYDVLRKMHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YENDVINLPEELKVQIKFELDELMTLHEELLMRISKKVPATKHDCQTGITEPYKLNIMDA
HCCHHCCCCHHHEEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHHHH
FLEEINTTPSDAYSKEHIFVIIGTLFDYRDKLEHLDRITHSFYKFHKEDKKFRIEHSEEL
HHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9202460; 9384377 [H]