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The map label for this gene is yodC [H]

Identifier: 222151817

GI number: 222151817

Start: 1698092

End: 1698739

Strand: Direct

Name: yodC [H]

Synonym: MCCL_1574

Alternate gene names: 222151817

Gene position: 1698092-1698739 (Clockwise)

Preceding gene: 222151816

Following gene: 222151821

Centisome position: 80.77

GC content: 38.89

Gene sequence:

>648_bases
ATGATATACATATCAATATTTAGGAGGAGCAAAATGATAGCAACAGATATACAAGAGAAATTACTGACACGCCGTGCAGC
GAAACAATACGATCCAGCGTTCAAACTTTCTCAGGATGAAATACTCGACTTACTTGATGCTGCAAACAAAGCACCGTCAG
CATGGAATCTTCAACATTGGAAGTTTATGGTTGTTCACTCAGATGAAGGTAAACAGAAGTTACTCCCTATCGCCTTTAAC
CAGCAGCAAATTGTTGATGCAAGTGCAGTCATCGTAATATTAGGTGATAAAGAAGCAAATAAAAATATCGATGAAATTTG
CGCACCTGATATCCAAAAAGGACGAATGACTGATGAAATTAAAGAACGTCTCGCAAGTCAGATCAACAATGTGTATCAAA
ATGAACATTATGCTTATGAGGCAGCAGTCATGAACTCTACATTCCCTGCGATGCAGATTATGAATTTTGCAACGTTACGC
GATTTAGGTACTTGTGCCATCGGTGGATTCAACCGCACACAATTAATTGAATCGTTCAATATCGACGAGCGCTATGTTCC
AACAATGCTGATCACTGTTGGAAAGTCTATTAAGACACCGCGTGAAACAGACAGAAGAGATGTACAGACTATTACGGAAT
TTCATTAA

Upstream 100 bases:

>100_bases
CGCTAGAAAGCTATAAACTGGAGTTTATACATCCATTTACCGGAGAGACTGTTACAGCAACATTAGAGCAATAATTTTGC
ATATCGTATAGCGATTCACT

Downstream 100 bases:

>100_bases
AAGATAAGACACGCAAAAGAGGCAGGAAACTTATAAGTTTCCTGCCTCTTTTCATGGTTTTGCTTGTGGCAGAACACTTC
TGTCACGCCCTTTAGTTACG

Product: hypothetical protein

Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIYISIFRRSKMIATDIQEKLLTRRAAKQYDPAFKLSQDEILDLLDAANKAPSAWNLQHWKFMVVHSDEGKQKLLPIAFN
QQQIVDASAVIVILGDKEANKNIDEICAPDIQKGRMTDEIKERLASQINNVYQNEHYAYEAAVMNSTFPAMQIMNFATLR
DLGTCAIGGFNRTQLIESFNIDERYVPTMLITVGKSIKTPRETDRRDVQTITEFH

Sequences:

>Translated_215_residues
MIYISIFRRSKMIATDIQEKLLTRRAAKQYDPAFKLSQDEILDLLDAANKAPSAWNLQHWKFMVVHSDEGKQKLLPIAFN
QQQIVDASAVIVILGDKEANKNIDEICAPDIQKGRMTDEIKERLASQINNVYQNEHYAYEAAVMNSTFPAMQIMNFATLR
DLGTCAIGGFNRTQLIESFNIDERYVPTMLITVGKSIKTPRETDRRDVQTITEFH
>Mature_215_residues
MIYISIFRRSKMIATDIQEKLLTRRAAKQYDPAFKLSQDEILDLLDAANKAPSAWNLQHWKFMVVHSDEGKQKLLPIAFN
QQQIVDASAVIVILGDKEANKNIDEICAPDIQKGRMTDEIKERLASQINNVYQNEHYAYEAAVMNSTFPAMQIMNFATLR
DLGTCAIGGFNRTQLIESFNIDERYVPTMLITVGKSIKTPRETDRRDVQTITEFH

Specific function: Putative nitroreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24600; Mature: 24600

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYISIFRRSKMIATDIQEKLLTRRAAKQYDPAFKLSQDEILDLLDAANKAPSAWNLQHW
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE
KFMVVHSDEGKQKLLPIAFNQQQIVDASAVIVILGDKEANKNIDEICAPDIQKGRMTDEI
EEEEEECCCCCCEEEEEEECCHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCHHHH
KERLASQINNVYQNEHYAYEAAVMNSTFPAMQIMNFATLRDLGTCAIGGFNRTQLIESFN
HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEECCCCHHHHHHHCC
IDERYVPTMLITVGKSIKTPRETDRRDVQTITEFH
CCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MIYISIFRRSKMIATDIQEKLLTRRAAKQYDPAFKLSQDEILDLLDAANKAPSAWNLQHW
CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE
KFMVVHSDEGKQKLLPIAFNQQQIVDASAVIVILGDKEANKNIDEICAPDIQKGRMTDEI
EEEEEECCCCCCEEEEEEECCHHHCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCHHHH
KERLASQINNVYQNEHYAYEAAVMNSTFPAMQIMNFATLRDLGTCAIGGFNRTQLIESFN
HHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHEECCCCHHHHHHHCC
IDERYVPTMLITVGKSIKTPRETDRRDVQTITEFH
CCCHHHHHHHEECCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FMN. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NAD(P)H; 6,7-Dihydropteridine [C]

Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]