Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is ytfP [H]

Identifier: 222151681

GI number: 222151681

Start: 1554025

End: 1555269

Strand: Direct

Name: ytfP [H]

Synonym: MCCL_1434

Alternate gene names: 222151681

Gene position: 1554025-1555269 (Clockwise)

Preceding gene: 222151659

Following gene: 222151684

Centisome position: 73.92

GC content: 43.21

Gene sequence:

>1245_bases
ATGTTTAATACTATAGTTATCGGAGGCGGACCAAGTGGCCTGATGGCTGCGATCAGTGCATCAGAAAATGGGAAATCCGT
TCTCTTGATCGATAAGAAGGATAAGTTAGGACGCAAACTCCAGATTTCTGGTGGAGGACGCTGTAATGTCACGAATCGTG
TCTCTCACGAAGAATTGATACAACACCTACCAGGAAACGGAAAGTTTCTCTACAGTGCATTTAATACATTTGATAACTTC
GCCATTATCGATTACTTTGAGAACCTCGGCGTCCGCTTAAAAGAAGAAGATCACGGCCGCATGTTCCCAGTGACTGATAA
TGCGAAGGACGTAGTTAACGCACTGAAACAACAGCTCGTCAAAAACAACGTCGATATCCGCACGAATCAGAAGGTCGCAT
CCCTTCTCGTGCAGGACACAGTCAAAGGGGTCAGACTGGAAGACGCCACTGAAATCTATGCTGACAATGTTATTATTGCA
ACAGGAGGAAAAAGCGTACCTCATACCGGGTCAACAGGAGACGGATATGAATTTGCGAAACAGGCAGGACATACCATCAC
AGAACTCTTTCCTACTGAAGTACCCATAACTTCGAATGCGCCATTCATTAAAGCAAAGACGTTGCAAGGATTAAGCTTGC
GTGATGTTGCACTCAGTGTCCTGCGTAAGAACGGCAAACCCCGTATCACACACCAGATGGACATGATATTTACACATTTC
GGTATCTCTGGCCCTGCAGCATTACGCTGCTCACAGTTTGTATATAAAGAACAAAAGAGCCAGAAGAAACAGGACATTAC
AATGATGATCGACTGCTTTCCACAAGAAAGTATCGGCGCACTGAAAAACAGAATCACAAAAATGATCGACACGAATAAAG
ACAAAGCCATTAAAAACAGTTTAAAAGGACTCGTATCTGAACGCTACTTATTATTCTTACTGGAACAAGCTGGACTGAAC
CTGGAAGATAACGGCCATCACTTAAAGAAAGAAGCGGTAGAACAGTTTTGCGAGCTGCTGAAAGGATTCAAATTCACAGT
AAACGGTACCCAATCGATAGAAAAAGCATTCGTCACGGGTGGCGGCGTATCTGTGAAAGAAATTGTACCTGCAACGATGC
AATCGAAGCTGCATGATAATCTATATTTTTGTGGTGAAGTATTAGATATTCATGGATATACAGGCGGTTATAACATTACC
AGCGCTCTCGTTACCGGATACATCGCAGGATTAAATTGCAGATAA

Upstream 100 bases:

>100_bases
GAATGTTTATTATCATAACACCATTCAAAAATATTAACTACTGAATTCATATATTTTACCATAAAATAAATGTATAATAT
TTTAAAATAGGAGGTCAAAT

Downstream 100 bases:

>100_bases
GGTTGTCACATGTGCGTTTAGTCACGAGTAAAATTACGAAAAGATGCCTAAGAAACGCTCTTTGTTTCTGGCATCTTTTT
GATTTTATCGAAGTGACTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELIQHLPGNGKFLYSAFNTFDNF
AIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLVKNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIA
TGGKSVPHTGSTGDGYEFAKQAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF
GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNSLKGLVSERYLLFLLEQAGLN
LEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTGGGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNIT
SALVTGYIAGLNCR

Sequences:

>Translated_414_residues
MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELIQHLPGNGKFLYSAFNTFDNF
AIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLVKNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIA
TGGKSVPHTGSTGDGYEFAKQAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF
GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNSLKGLVSERYLLFLLEQAGLN
LEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTGGGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNIT
SALVTGYIAGLNCR
>Mature_414_residues
MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELIQHLPGNGKFLYSAFNTFDNF
AIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLVKNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIA
TGGKSVPHTGSTGDGYEFAKQAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF
GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNSLKGLVSERYLLFLLEQAGLN
LEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTGGGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNIT
SALVTGYIAGLNCR

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=389, Percent_Identity=29.8200514138817, Blast_Score=155, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 45435; Mature: 45435

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELI
CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHH
QHLPGNGKFLYSAFNTFDNFAIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLV
HHCCCCCEEEEEEHHCCCCEEHEEEHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHHH
KNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIATGGKSVPHTGSTGDGYEFAK
HCCCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
QAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF
HCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNS
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LKGLVSERYLLFLLEQAGLNLEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTG
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC
GGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNITSALVTGYIAGLNCR
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFNTIVIGGGPSGLMAAISASENGKSVLLIDKKDKLGRKLQISGGGRCNVTNRVSHEELI
CCEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHH
QHLPGNGKFLYSAFNTFDNFAIIDYFENLGVRLKEEDHGRMFPVTDNAKDVVNALKQQLV
HHCCCCCEEEEEEHHCCCCEEHEEEHHHCCCEEEECCCCCEEECCCCHHHHHHHHHHHHH
KNNVDIRTNQKVASLLVQDTVKGVRLEDATEIYADNVIIATGGKSVPHTGSTGDGYEFAK
HCCCCCCCCHHHHHHHHHHHHCCCEECCHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHH
QAGHTITELFPTEVPITSNAPFIKAKTLQGLSLRDVALSVLRKNGKPRITHQMDMIFTHF
HCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHC
GISGPAALRCSQFVYKEQKSQKKQDITMMIDCFPQESIGALKNRITKMIDTNKDKAIKNS
CCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHH
LKGLVSERYLLFLLEQAGLNLEDNGHHLKKEAVEQFCELLKGFKFTVNGTQSIEKAFVTG
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCC
GGVSVKEIVPATMQSKLHDNLYFCGEVLDIHGYTGGYNITSALVTGYIAGLNCR
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]