| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is expZ [H]
Identifier: 222151642
GI number: 222151642
Start: 1510836
End: 1512356
Strand: Direct
Name: expZ [H]
Synonym: MCCL_1395
Alternate gene names: 222151642
Gene position: 1510836-1512356 (Clockwise)
Preceding gene: 222151641
Following gene: 222151643
Centisome position: 71.87
GC content: 24.46
Gene sequence:
>1521_bases GTGAGAAATGGTATCAATATATCTAACCACGATGTAACTATACAAGACAATATACTTTTCAAGATAAAAAAAATTATAAT AACAAAAAAAGATAGAATTGGTATAGTGGCAATGAATGGAACAGGGAAAACAACGTTTTTAAAAAATATTAAAGCACACA ATACTTTCGATACAATAAATTCAAATTGGGATATAAAAATGTTAGATCAATTACCTACTCATGAAAATTTAAGTGGTGGA GAAATAGTAAAAAAAGAGTTGGAAAAAGTTTTTAATAGTACTGCTGATTGTGTGTTACTTGATGAACCAACATCAAATTT GGATAGTAAAAATATAAAATGGTTAATTAATAAGATAAGTGAAACAGATAAAGCAGTTGTAATAGTTTCTCATGATAGGA ATTTTTTGAATAAAACTGTAAATAAAATATTATATATTGAAGATGAGTATCTTCAAGTTTATATTGGAAATTATGATGAG TACGAAGAGGAAATGAATAAAAAATATGAGAAAGATTTAAATTTGTATAAAAAACAACAATATAAAAAGAAAAAAATAGA ACAAGAAATAATTAAAAAGAAAAATATTTCTAAAAATCTTCAAAAAATAAAAAAAGGTGTTTCATCTTCAGATTGGAAAG ATAGTCGAGTAACTGGTGGATATGAATCTAAAGAAAAAAGTATCGCTAAACAAGCTAAAAGTTTGGAAAAAAGAATTTCT AGAGAATTTAATTTTAAAAAAACATATATCCAAAAAGATATTAAGATTCAAGCGACAGGAAATTTATCATTAAAAAAGGG TACTACTCTATATAATTTAAATAAAGTACAAATAAGAAATAAGGATAATAGTATATTAAACTTAAATAATTTAAAAATCG AATTTGGAGATCACATTGGTATTATCGGAGATAATGGTTCGGGTAAAACCACAATTTTAGAGTATCTTTATTCTCAAAAT ATACGTGATTGTGAAGAAATATATGTATATGATAATGTATCAGTAGGTTATTTTGATCAATTACTAAAACAAAGTAACAA TAATTATACTGTGCTAGACATTGTGAGTGAAAATTCAGAGCAAGATAAACAAGTGATTTTTGATACTTTAGGTAGTTTGT CTATAAATAAAGACGATATGTTTAAAAGATATGAAAACTTAAGTGGTGGACAAAAAGTAAGAGTTAATATTGCGAAAGTA CTTCTAGGTAATCATCATCTCTTACTATTAGATGAACCGAATAACTACTTAGATATTTATGCTATAAAAGCATTAGAGAG TTATTTGAAAAATTATCCATCAACCTTTATATTAGTAAGTCACGACGAAACATTAGTTAAAAATACCTGTGAAAAAATAT TTATATTGGAAAATAACAAATTGATTGATGCTAGAAAAAATTCAAGATACAGTAATAATAATACAGATATACAGAAGTCA TTTTTGAAAGATTTAGCAATAATCAATGGGGAATCTAAAGAGATGGAAGATTTAAACCAATATATCAAAAAAAAATTATA A
Upstream 100 bases:
>100_bases ATAAATATATTTATTACTACTGGGATATTTGTTCTAATATTAACCACTTTAACATATAGAAAAATAAGTAGTATTTAATT TTTTTGCAGGAGGTGTTTTT
Downstream 100 bases:
>100_bases GAATATTAGCAGTAATTTGCTAAAAAACAGAAATTTTTTCATTTTCTTACTTATTGAGTTGTACATCCATCTTGATTTAT ACCAAAGTTTAATTGTAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRNGINISNHDVTIQDNILFKIKKIIITKKDRIGIVAMNGTGKTTFLKNIKAHNTFDTINSNWDIKMLDQLPTHENLSGG EIVKKELEKVFNSTADCVLLDEPTSNLDSKNIKWLINKISETDKAVVIVSHDRNFLNKTVNKILYIEDEYLQVYIGNYDE YEEEMNKKYEKDLNLYKKQQYKKKKIEQEIIKKKNISKNLQKIKKGVSSSDWKDSRVTGGYESKEKSIAKQAKSLEKRIS REFNFKKTYIQKDIKIQATGNLSLKKGTTLYNLNKVQIRNKDNSILNLNNLKIEFGDHIGIIGDNGSGKTTILEYLYSQN IRDCEEIYVYDNVSVGYFDQLLKQSNNNYTVLDIVSENSEQDKQVIFDTLGSLSINKDDMFKRYENLSGGQKVRVNIAKV LLGNHHLLLLDEPNNYLDIYAIKALESYLKNYPSTFILVSHDETLVKNTCEKIFILENNKLIDARKNSRYSNNNTDIQKS FLKDLAIINGESKEMEDLNQYIKKKL
Sequences:
>Translated_506_residues MRNGINISNHDVTIQDNILFKIKKIIITKKDRIGIVAMNGTGKTTFLKNIKAHNTFDTINSNWDIKMLDQLPTHENLSGG EIVKKELEKVFNSTADCVLLDEPTSNLDSKNIKWLINKISETDKAVVIVSHDRNFLNKTVNKILYIEDEYLQVYIGNYDE YEEEMNKKYEKDLNLYKKQQYKKKKIEQEIIKKKNISKNLQKIKKGVSSSDWKDSRVTGGYESKEKSIAKQAKSLEKRIS REFNFKKTYIQKDIKIQATGNLSLKKGTTLYNLNKVQIRNKDNSILNLNNLKIEFGDHIGIIGDNGSGKTTILEYLYSQN IRDCEEIYVYDNVSVGYFDQLLKQSNNNYTVLDIVSENSEQDKQVIFDTLGSLSINKDDMFKRYENLSGGQKVRVNIAKV LLGNHHLLLLDEPNNYLDIYAIKALESYLKNYPSTFILVSHDETLVKNTCEKIFILENNKLIDARKNSRYSNNNTDIQKS FLKDLAIINGESKEMEDLNQYIKKKL >Mature_506_residues MRNGINISNHDVTIQDNILFKIKKIIITKKDRIGIVAMNGTGKTTFLKNIKAHNTFDTINSNWDIKMLDQLPTHENLSGG EIVKKELEKVFNSTADCVLLDEPTSNLDSKNIKWLINKISETDKAVVIVSHDRNFLNKTVNKILYIEDEYLQVYIGNYDE YEEEMNKKYEKDLNLYKKQQYKKKKIEQEIIKKKNISKNLQKIKKGVSSSDWKDSRVTGGYESKEKSIAKQAKSLEKRIS REFNFKKTYIQKDIKIQATGNLSLKKGTTLYNLNKVQIRNKDNSILNLNNLKIEFGDHIGIIGDNGSGKTTILEYLYSQN IRDCEEIYVYDNVSVGYFDQLLKQSNNNYTVLDIVSENSEQDKQVIFDTLGSLSINKDDMFKRYENLSGGQKVRVNIAKV LLGNHHLLLLDEPNNYLDIYAIKALESYLKNYPSTFILVSHDETLVKNTCEKIFILENNKLIDARKNSRYSNNNTDIQKS FLKDLAIINGESKEMEDLNQYIKKKL
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=404, Percent_Identity=27.4752475247525, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI27881506, Length=392, Percent_Identity=25.765306122449, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI10947137, Length=392, Percent_Identity=25.765306122449, Blast_Score=122, Evalue=9e-28, Organism=Homo sapiens, GI10947135, Length=391, Percent_Identity=26.8542199488491, Blast_Score=106, Evalue=5e-23, Organism=Homo sapiens, GI69354671, Length=391, Percent_Identity=26.8542199488491, Blast_Score=105, Evalue=7e-23, Organism=Escherichia coli, GI1787041, Length=398, Percent_Identity=29.8994974874372, Blast_Score=154, Evalue=2e-38, Organism=Escherichia coli, GI2367384, Length=430, Percent_Identity=27.2093023255814, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1789751, Length=388, Percent_Identity=26.0309278350515, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI1787182, Length=391, Percent_Identity=26.5984654731458, Blast_Score=136, Evalue=3e-33, Organism=Escherichia coli, GI1787758, Length=194, Percent_Identity=24.2268041237113, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788506, Length=262, Percent_Identity=22.5190839694656, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17559834, Length=389, Percent_Identity=25.4498714652956, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17555318, Length=399, Percent_Identity=26.0651629072682, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17553372, Length=395, Percent_Identity=27.5949367088608, Blast_Score=130, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321121, Length=404, Percent_Identity=27.970297029703, Blast_Score=133, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6320874, Length=405, Percent_Identity=25.4320987654321, Blast_Score=122, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323278, Length=201, Percent_Identity=29.3532338308458, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6324314, Length=177, Percent_Identity=28.2485875706215, Blast_Score=83, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6325030, Length=181, Percent_Identity=27.6243093922652, Blast_Score=81, Evalue=4e-16, Organism=Drosophila melanogaster, GI24666836, Length=399, Percent_Identity=28.5714285714286, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24641342, Length=411, Percent_Identity=28.2238442822384, Blast_Score=128, Evalue=9e-30, Organism=Drosophila melanogaster, GI24642252, Length=396, Percent_Identity=24.7474747474747, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI18859989, Length=396, Percent_Identity=24.7474747474747, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 58516; Mature: 58516
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNGINISNHDVTIQDNILFKIKKIIITKKDRIGIVAMNGTGKTTFLKNIKAHNTFDTIN CCCCCCCCCCEEEEECCHHHEEEEHHEEECCCEEEEEECCCCCCHHHHCCCCCCCHHCCC SNWDIKMLDQLPTHENLSGGEIVKKELEKVFNSTADCVLLDEPTSNLDSKNIKWLINKIS CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHC ETDKAVVIVSHDRNFLNKTVNKILYIEDEYLQVYIGNYDEYEEEMNKKYEKDLNLYKKQQ CCCCEEEEEECCCHHHHHHHHHEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH YKKKKIEQEIIKKKNISKNLQKIKKGVSSSDWKDSRVTGGYESKEKSIAKQAKSLEKRIS HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH REFNFKKTYIQKDIKIQATGNLSLKKGTTLYNLNKVQIRNKDNSILNLNNLKIEFGDHIG HHCCCHHHHHCCCEEEEEECCEEEECCCEEEECEEEEEECCCCCEEEEEEEEEEECCEEE IIGDNGSGKTTILEYLYSQNIRDCEEIYVYDNVSVGYFDQLLKQSNNNYTVLDIVSENSE EEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCC QDKQVIFDTLGSLSINKDDMFKRYENLSGGQKVRVNIAKVLLGNHHLLLLDEPNNYLDIY CHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEECCCCEEEEE AIKALESYLKNYPSTFILVSHDETLVKNTCEKIFILENNKLIDARKNSRYSNNNTDIQKS EHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHH FLKDLAIINGESKEMEDLNQYIKKKL HHHHHHHCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRNGINISNHDVTIQDNILFKIKKIIITKKDRIGIVAMNGTGKTTFLKNIKAHNTFDTIN CCCCCCCCCCEEEEECCHHHEEEEHHEEECCCEEEEEECCCCCCHHHHCCCCCCCHHCCC SNWDIKMLDQLPTHENLSGGEIVKKELEKVFNSTADCVLLDEPTSNLDSKNIKWLINKIS CCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHC ETDKAVVIVSHDRNFLNKTVNKILYIEDEYLQVYIGNYDEYEEEMNKKYEKDLNLYKKQQ CCCCEEEEEECCCHHHHHHHHHEEEEEECEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH YKKKKIEQEIIKKKNISKNLQKIKKGVSSSDWKDSRVTGGYESKEKSIAKQAKSLEKRIS HHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH REFNFKKTYIQKDIKIQATGNLSLKKGTTLYNLNKVQIRNKDNSILNLNNLKIEFGDHIG HHCCCHHHHHCCCEEEEEECCEEEECCCEEEECEEEEEECCCCCEEEEEEEEEEECCEEE IIGDNGSGKTTILEYLYSQNIRDCEEIYVYDNVSVGYFDQLLKQSNNNYTVLDIVSENSE EEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCC QDKQVIFDTLGSLSINKDDMFKRYENLSGGQKVRVNIAKVLLGNHHLLLLDEPNNYLDIY CHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCEEEEEECCCCEEEEE AIKALESYLKNYPSTFILVSHDETLVKNTCEKIFILENNKLIDARKNSRYSNNNTDIQKS EHHHHHHHHHHCCCEEEEEECCHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCHHHHH FLKDLAIINGESKEMEDLNQYIKKKL HHHHHHHCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]