| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151423
Identifier: 222151423
GI number: 222151423
Start: 1282431
End: 1283147
Strand: Direct
Name: 222151423
Synonym: MCCL_1175
Alternate gene names: NA
Gene position: 1282431-1283147 (Clockwise)
Preceding gene: 222151403
Following gene: 222151425
Centisome position: 61.0
GC content: 31.1
Gene sequence:
>717_bases ATGTCTGACTTTTTCTATTTTCATGTTTTTCTCCTTTGTATATGTATTTTAACTATATTTTCTGAATATATACATGTTAA CATAGTATTTAGAAAAACGAATCATTTGAGGAGTAAAAAAATGAAAAAATTCAAAATATTATCATTAATAATGACTTCTA CTATAACACTTACTGCCTGTGGCGGAGGTGCTGAAACAGAACTAACAGAAAAATCGACCGACTTAAAGAAGGAAATTAAA GTACTAAACTCTAAAATCGAAGATCAAAAAACCGATTTAATCACAAAACAAAACACTTTAAATGCTACTGACAATGAATT AAAACAGCTACAAGGGAGCATGCAGATGTCTAATCATGAATTTACAACGCACTTTAATTCGTATGCTGCCTCACTTGCAA TGGCTATAAAAATGTTTTCAACCATTGAAAACAAACTATCAAAACAAAATGATATTCAGATTAAAGAAAAACTAAGCACA ATTAAATCTGACGTCAAAGACACAATCCAGCAATATAATCATGTATTTAAAAATAGCCAGCCACCTGCAACATTTGCTGA TGTTCATCATCAGGTAAATGAAGCAAATCATAAATTCGAAAAGGCAGTCAGTTTGATTCATAGCGGCTACGAAAAATCTG ACACAAAAAAAATATCGCAAGGCAAAGCGATGCTTCACGATGCGATAGATGCATTTGATAAATTAACAATTGAGTAG
Upstream 100 bases:
>100_bases TGATGATCAACCCCGCACTACTACCTGTAAATCCAGATAAATATCTTCTGTTATGTGATGAAAGTACTACGACCGCGTCC AACTGCTTTTCTTCTAATAA
Downstream 100 bases:
>100_bases GTAAGCGCATGCGCTTACCTTCTTTTTAACCATTCTTCACTTCTATATTTTTCTATCAGTACAGAAACTTCCTGTTCAAT CTCAGCAGTTACTTCAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTACGGGAETELTEKSTDLKKEIK VLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHEFTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLST IKSDVKDTIQQYNHVFKNSQPPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE
Sequences:
>Translated_238_residues MSDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTACGGGAETELTEKSTDLKKEIK VLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHEFTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLST IKSDVKDTIQQYNHVFKNSQPPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE >Mature_237_residues SDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTACGGGAETELTEKSTDLKKEIKV LNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHEFTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLSTI KSDVKDTIQQYNHVFKNSQPPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27159; Mature: 27027
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTAC CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEC GGGAETELTEKSTDLKKEIKVLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCH FTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLSTIKSDVKDTIQQYNHVFKNSQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDFFYFHVFLLCICILTIFSEYIHVNIVFRKTNHLRSKKMKKFKILSLIMTSTITLTAC CCHHHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEC GGGAETELTEKSTDLKKEIKVLNSKIEDQKTDLITKQNTLNATDNELKQLQGSMQMSNHE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCH FTTHFNSYAASLAMAIKMFSTIENKLSKQNDIQIKEKLSTIKSDVKDTIQQYNHVFKNSQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PPATFADVHHQVNEANHKFEKAVSLIHSGYEKSDTKKISQGKAMLHDAIDAFDKLTIE CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA