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The map label for this gene is ebsB [H]

Identifier: 222151331

GI number: 222151331

Start: 1192467

End: 1192856

Strand: Direct

Name: ebsB [H]

Synonym: MCCL_1084

Alternate gene names: 222151331

Gene position: 1192467-1192856 (Clockwise)

Preceding gene: 222151330

Following gene: 222151337

Centisome position: 56.72

GC content: 36.15

Gene sequence:

>390_bases
ATGACCCAAGTTTATATAGATGCAGCAACGAGACAAGATCCTTTACAAAGTGCCTGTGGCATCATCTTCAGGCATGATTC
TGACATTGTAGAGTACGGTGAGTATTTAGGAGATATAGATAATCATCATGCGGAATGGCAGAGTCTGATTATCGCTCTGA
GATTGAGTCTACAAAACAACTACACATCATTACTGATAAAAACAGACTCCAAAATTGTCGCTGATTCTATACACAAAAAG
TTCGTAAGAAAAGAAGCATATAAAATTTATCTTCAGGAATATCTAGCTCTTGAGCCTCAATTTGAACTTGTCATCATAGA
CTGGATACCTAGAACAGAAAATAAACATGCAGATACTATCGCAAGAAGAACATTAAACAGATATAGCTGA

Upstream 100 bases:

>100_bases
TTGAAATCTTTATGACCACATATCTATTTAAACTTTTGTCTACTATTTTTAATATTCCTTTCGGATACTGGGCGAAATCG
TTCCATAAAGAGGAAGCATA

Downstream 100 bases:

>100_bases
GCTATATCTGTTTAATGTTTTGTTCTAATACACTAAGTACACCACTTTCATTATTGGAAGGTGCAATAGCACTGGCGATA
GATTTCACCTGACGAGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTQVYIDAATRQDPLQSACGIIFRHDSDIVEYGEYLGDIDNHHAEWQSLIIALRLSLQNNYTSLLIKTDSKIVADSIHKK
FVRKEAYKIYLQEYLALEPQFELVIIDWIPRTENKHADTIARRTLNRYS

Sequences:

>Translated_129_residues
MTQVYIDAATRQDPLQSACGIIFRHDSDIVEYGEYLGDIDNHHAEWQSLIIALRLSLQNNYTSLLIKTDSKIVADSIHKK
FVRKEAYKIYLQEYLALEPQFELVIIDWIPRTENKHADTIARRTLNRYS
>Mature_128_residues
TQVYIDAATRQDPLQSACGIIFRHDSDIVEYGEYLGDIDNHHAEWQSLIIALRLSLQNNYTSLLIKTDSKIVADSIHKKF
VRKEAYKIYLQEYLALEPQFELVIIDWIPRTENKHADTIARRTLNRYS

Specific function: Affects the expression of the receptor, named binding substance, that mediates mating aggregate formation. May function as a cell wall hydrolase [H]

COG id: COG0328

COG function: function code L; Ribonuclease HI

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RNase H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002156 [H]

Pfam domain/function: PF00075 RnaseH [H]

EC number: NA

Molecular weight: Translated: 15097; Mature: 14966

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50879 RNASE_H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVYIDAATRQDPLQSACGIIFRHDSDIVEYGEYLGDIDNHHAEWQSLIIALRLSLQNN
CCEEEEECCCCCCHHHHHCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
YTSLLIKTDSKIVADSIHKKFVRKEAYKIYLQEYLALEPQFELVIIDWIPRTENKHADTI
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH
ARRTLNRYS
HHHHHHCCC
>Mature Secondary Structure 
TQVYIDAATRQDPLQSACGIIFRHDSDIVEYGEYLGDIDNHHAEWQSLIIALRLSLQNN
CEEEEECCCCCCHHHHHCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC
YTSLLIKTDSKIVADSIHKKFVRKEAYKIYLQEYLALEPQFELVIIDWIPRTENKHADTI
CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH
ARRTLNRYS
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8226689; 12663927 [H]