Click here to switch to the map view.

The map label for this gene is ypdP [H]

Identifier: 222151330

GI number: 222151330

Start: 1191787

End: 1192467

Strand: Direct

Name: ypdP [H]

Synonym: MCCL_1083

Alternate gene names: 222151330

Gene position: 1191787-1192467 (Clockwise)

Preceding gene: 222151305

Following gene: 222151331

Centisome position: 56.69

GC content: 36.56

Gene sequence:

>681_bases
ATGACAAATGAATTATGGGCTATTGCTGCATTTATCATGACATTTGTGATGCTCGTTATTATGTATAGGTTCTTTGGCAA
AGAAGGACTTTTTGTATGGGTTGCAGTCGGTACAGTCATCGCAAATATTCAAGTGACTAAATCCGTTGAACTTTTCGGAA
TCACTGCAACGCTAGGGAATGTATTATTTGCATCCATCTATCTGGCAACAGACATCTTGAATGATCGTTACGGTAGACAA
GTTGCTAAGAAAGCTGTGTGGTTAGGCTTTTCATCCGCAATAATAATGACCGTTTTAATGACGATATCTTTACAATTCCA
TCCAGCTGCAAATGATATTGCACAGCAAAGTCTTGAGACATTATTCGGGATTGTACCAAGAATCGTACTCGGTTCAATTG
TTGCTTATATTATCGGGCAGTATGTGGATGTCTATCTTTTCAATTTGATAAAAAAACGTTTTTCTTCTGATCGCACATTC
ATTGTAAGAGCTTATGGTAGTACAGTATTCAGCTCAATTATCGACACAGCACTATTCACATTGATTGCTTTTACAGGCCT
CATGCCAGGAAATGTTCTTTTTGAAATCTTTATGACCACATATCTATTTAAACTTTTGTCTACTATTTTTAATATTCCTT
TCGGATACTGGGCGAAATCGTTCCATAAAGAGGAAGCATAA

Upstream 100 bases:

>100_bases
CAAATTTACATATTTAAGCATGGTGCTTTGCTTAACACTTGTTGCAATAATACATTTATACCACTATAATACTTAAGTTA
ACTTTAAAAGGAGGTTTACT

Downstream 100 bases:

>100_bases
TGACCCAAGTTTATATAGATGCAGCAACGAGACAAGATCCTTTACAAAGTGCCTGTGGCATCATCTTCAGGCATGATTCT
GACATTGTAGAGTACGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTNELWAIAAFIMTFVMLVIMYRFFGKEGLFVWVAVGTVIANIQVTKSVELFGITATLGNVLFASIYLATDILNDRYGRQ
VAKKAVWLGFSSAIIMTVLMTISLQFHPAANDIAQQSLETLFGIVPRIVLGSIVAYIIGQYVDVYLFNLIKKRFSSDRTF
IVRAYGSTVFSSIIDTALFTLIAFTGLMPGNVLFEIFMTTYLFKLLSTIFNIPFGYWAKSFHKEEA

Sequences:

>Translated_226_residues
MTNELWAIAAFIMTFVMLVIMYRFFGKEGLFVWVAVGTVIANIQVTKSVELFGITATLGNVLFASIYLATDILNDRYGRQ
VAKKAVWLGFSSAIIMTVLMTISLQFHPAANDIAQQSLETLFGIVPRIVLGSIVAYIIGQYVDVYLFNLIKKRFSSDRTF
IVRAYGSTVFSSIIDTALFTLIAFTGLMPGNVLFEIFMTTYLFKLLSTIFNIPFGYWAKSFHKEEA
>Mature_225_residues
TNELWAIAAFIMTFVMLVIMYRFFGKEGLFVWVAVGTVIANIQVTKSVELFGITATLGNVLFASIYLATDILNDRYGRQV
AKKAVWLGFSSAIIMTVLMTISLQFHPAANDIAQQSLETLFGIVPRIVLGSIVAYIIGQYVDVYLFNLIKKRFSSDRTFI
VRAYGSTVFSSIIDTALFTLIAFTGLMPGNVLFEIFMTTYLFKLLSTIFNIPFGYWAKSFHKEEA

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 25378; Mature: 25247

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNELWAIAAFIMTFVMLVIMYRFFGKEGLFVWVAVGTVIANIQVTKSVELFGITATLGN
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VLFASIYLATDILNDRYGRQVAKKAVWLGFSSAIIMTVLMTISLQFHPAANDIAQQSLET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFGIVPRIVLGSIVAYIIGQYVDVYLFNLIKKRFSSDRTFIVRAYGSTVFSSIIDTALFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
LIAFTGLMPGNVLFEIFMTTYLFKLLSTIFNIPFGYWAKSFHKEEA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TNELWAIAAFIMTFVMLVIMYRFFGKEGLFVWVAVGTVIANIQVTKSVELFGITATLGN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
VLFASIYLATDILNDRYGRQVAKKAVWLGFSSAIIMTVLMTISLQFHPAANDIAQQSLET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFGIVPRIVLGSIVAYIIGQYVDVYLFNLIKKRFSSDRTFIVRAYGSTVFSSIIDTALFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHH
LIAFTGLMPGNVLFEIFMTTYLFKLLSTIFNIPFGYWAKSFHKEEA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]