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The map label for this gene is yoqD [H]

Identifier: 222151194

GI number: 222151194

Start: 1040837

End: 1041607

Strand: Direct

Name: yoqD [H]

Synonym: MCCL_0945

Alternate gene names: 222151194

Gene position: 1040837-1041607 (Clockwise)

Preceding gene: 222151193

Following gene: 222151195

Centisome position: 49.51

GC content: 34.89

Gene sequence:

>771_bases
ATGAAGCAAATGAACACATTAATCAAGATCGAGAATAATTCAGAACTAGGCCCAGTCGTTAGCAGTAGGATAGTTGCTGA
AGAGTTAAGTAGAAGACATTCACATGTAATTAGAGATTTAGAGAAAATTTTACTCGACCCAAATGTGGGCTCAGTGATTT
TTGAATCTAAATACAAAGATGTAACAGGTAGAACGTTAAAAGAGTATTTGTTAACTAAAGACGGATTCATCCTATATATG
TTCAACATCCAAGGTCACAACGACTTCAAAATGGCATATATCAATAGATTCAACGAAATGGAGAAAACATTACAAAACAG
ATTACCTGGAACATACAAGGAAGCATTATTGCAGTTAGTTGAACAAGTGGAAGAAAATGAGAAATTACATCTAGAGAATA
CGATGCAGAAACAACAGATTGGAGAGTTAAAACCGAAAGCGAACTATGTAGACACAATTCTTAAAAGTAAGAGCTTAGTT
ACTATTGGTCAGATCGCAAAAGATTATGGCATGTCTGCTCAAGAGATGAATAAACTGCTTCAACGATTCAAAATTCAGTA
TAAGCAATCAGGACAATGGCTACTTTACTCAAATCATCACGCTAAAGGTTATACGCATTCAGAAACAACTGAGATTACGC
ATAAAAATGGAAGTGTTTCAGTGAGAATGCATACGAAATGGACACAGAAAGGTCGTTTATTCCTTTATGAATTCTTGAAA
CGCAGAGATATTATTCCTGTGATTGAATTTGAAAGCGAGGAAACTGCATGA

Upstream 100 bases:

>100_bases
CAAAATTATACAGTAAGAGTTTGCAAAATATAACGGAACATCAGTTCTAAAGGAGAAATTATTTTATTCCAAAACATTTA
TTAATGAAAGAACAGAAAGG

Downstream 100 bases:

>100_bases
AGTTACCTTACTGTAGGCAAGTAGAGTTCGTTAAAGTTGGAAGAGCATTTTTCACGCTTGATGAGTACTACAGATTGATA
AAAGAATACGGACCGCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKQMNTLIKIENNSELGPVVSSRIVAEELSRRHSHVIRDLEKILLDPNVGSVIFESKYKDVTGRTLKEYLLTKDGFILYM
FNIQGHNDFKMAYINRFNEMEKTLQNRLPGTYKEALLQLVEQVEENEKLHLENTMQKQQIGELKPKANYVDTILKSKSLV
TIGQIAKDYGMSAQEMNKLLQRFKIQYKQSGQWLLYSNHHAKGYTHSETTEITHKNGSVSVRMHTKWTQKGRLFLYEFLK
RRDIIPVIEFESEETA

Sequences:

>Translated_256_residues
MKQMNTLIKIENNSELGPVVSSRIVAEELSRRHSHVIRDLEKILLDPNVGSVIFESKYKDVTGRTLKEYLLTKDGFILYM
FNIQGHNDFKMAYINRFNEMEKTLQNRLPGTYKEALLQLVEQVEENEKLHLENTMQKQQIGELKPKANYVDTILKSKSLV
TIGQIAKDYGMSAQEMNKLLQRFKIQYKQSGQWLLYSNHHAKGYTHSETTEITHKNGSVSVRMHTKWTQKGRLFLYEFLK
RRDIIPVIEFESEETA
>Mature_256_residues
MKQMNTLIKIENNSELGPVVSSRIVAEELSRRHSHVIRDLEKILLDPNVGSVIFESKYKDVTGRTLKEYLLTKDGFILYM
FNIQGHNDFKMAYINRFNEMEKTLQNRLPGTYKEALLQLVEQVEENEKLHLENTMQKQQIGELKPKANYVDTILKSKSLV
TIGQIAKDYGMSAQEMNKLLQRFKIQYKQSGQWLLYSNHHAKGYTHSETTEITHKNGSVSVRMHTKWTQKGRLFLYEFLK
RRDIIPVIEFESEETA

Specific function: Unknown

COG id: COG3645

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005039
- InterPro:   IPR014054
- InterPro:   IPR019104 [H]

Pfam domain/function: PF03374 ANT; PF09669 Phage_pRha [H]

EC number: NA

Molecular weight: Translated: 29944; Mature: 29944

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQMNTLIKIENNSELGPVVSSRIVAEELSRRHSHVIRDLEKILLDPNVGSVIFESKYKD
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCC
VTGRTLKEYLLTKDGFILYMFNIQGHNDFKMAYINRFNEMEKTLQNRLPGTYKEALLQLV
CHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EQVEENEKLHLENTMQKQQIGELKPKANYVDTILKSKSLVTIGQIAKDYGMSAQEMNKLL
HHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
QRFKIQYKQSGQWLLYSNHHAKGYTHSETTEITHKNGSVSVRMHTKWTQKGRLFLYEFLK
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHH
RRDIIPVIEFESEETA
HCCCCEEEECCCCCCC
>Mature Secondary Structure
MKQMNTLIKIENNSELGPVVSSRIVAEELSRRHSHVIRDLEKILLDPNVGSVIFESKYKD
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHCC
VTGRTLKEYLLTKDGFILYMFNIQGHNDFKMAYINRFNEMEKTLQNRLPGTYKEALLQLV
CHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EQVEENEKLHLENTMQKQQIGELKPKANYVDTILKSKSLVTIGQIAKDYGMSAQEMNKLL
HHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHH
QRFKIQYKQSGQWLLYSNHHAKGYTHSETTEITHKNGSVSVRMHTKWTQKGRLFLYEFLK
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCHHHHHHHH
RRDIIPVIEFESEETA
HCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]