| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151184
Identifier: 222151184
GI number: 222151184
Start: 1029581
End: 1030345
Strand: Direct
Name: 222151184
Synonym: MCCL_0935
Alternate gene names: NA
Gene position: 1029581-1030345 (Clockwise)
Preceding gene: 222151183
Following gene: 222151185
Centisome position: 48.97
GC content: 37.91
Gene sequence:
>765_bases GTGCTGACAAAGGATATTTCTCTACAGTTGATGCAAACAATGAAATTAGTGGTGCTCACTTCTATATCAGACCAAAACGT GGTGGGGAACTTCGAGCAACTTATAACGATGGGTGGAGAAACTTCTTATGCTAACTTTCGTTCAAACGGTATCTATGCAC CATGGATTGATTATAACGGACATATACCAGGATCACACTTTTATATTAGACCAGCGTATGGGGGAGAAGTACGTTTAACG GCTACTGGTACAACAAACAATTGGGCTAACCTGCGTTCAGATGGCATTTACGCTCCCTGGATAGACTTCAATGGTCAAAT TCCAGGCTCGCATTTGTATATTAGACCTGGCTCAGGTGGGGAGGTTAAGTTCACTAGAACTGGTACTACAGATGTCTGGG CAGATATTAGGTTCGGTAGTTGGAACGCAATGTCTCATGAAAAATATAAAAATAACATCGAAAAATGGAACTATAATGTA TTAGGCATATATAAAAACGACTTAGTGTTACATTCATACAAAGTCAATTCTGAATCAGATACTTTATACGCTAGAATACA CCACGGTATTGTACTTAGAGAAAATTCAAACCTAGACCAATTCCCAGCGGAATGGAGAAATGGTGACGGTTTTGATGGTA ATGAAGTCTTATGGTGGAACACGAAAGCTGTTCAAGAATTAGCGTTTGAGAATGATGAGTTAAGAAATAAGATTAGTGAT TTAGAAAACAGATTAAAAATATTGGAGGATAAGTTAAATGGATAA
Upstream 100 bases:
>100_bases ATTAAATTTCCGTTAAATGCAAATGGGTATATAGGGATTGATGGTAGCGAACTAAGGATAATGTCAGATGGTTTGGTAGA AGGTGGATATAAAAGCGTTC
Downstream 100 bases:
>100_bases TAATAATCAACCACAACGTAATTTAGAAAAAGAAGTGGCATTACTACAACAACAACTCATGATGGCGGTATCGGATAAAG TGATGTTACAAGCAATGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MLTKDISLQLMQTMKLVVLTSISDQNVVGNFEQLITMGGETSYANFRSNGIYAPWIDYNGHIPGSHFYIRPAYGGEVRLT ATGTTNNWANLRSDGIYAPWIDFNGQIPGSHLYIRPGSGGEVKFTRTGTTDVWADIRFGSWNAMSHEKYKNNIEKWNYNV LGIYKNDLVLHSYKVNSESDTLYARIHHGIVLRENSNLDQFPAEWRNGDGFDGNEVLWWNTKAVQELAFENDELRNKISD LENRLKILEDKLNG
Sequences:
>Translated_254_residues MLTKDISLQLMQTMKLVVLTSISDQNVVGNFEQLITMGGETSYANFRSNGIYAPWIDYNGHIPGSHFYIRPAYGGEVRLT ATGTTNNWANLRSDGIYAPWIDFNGQIPGSHLYIRPGSGGEVKFTRTGTTDVWADIRFGSWNAMSHEKYKNNIEKWNYNV LGIYKNDLVLHSYKVNSESDTLYARIHHGIVLRENSNLDQFPAEWRNGDGFDGNEVLWWNTKAVQELAFENDELRNKISD LENRLKILEDKLNG >Mature_254_residues MLTKDISLQLMQTMKLVVLTSISDQNVVGNFEQLITMGGETSYANFRSNGIYAPWIDYNGHIPGSHFYIRPAYGGEVRLT ATGTTNNWANLRSDGIYAPWIDFNGQIPGSHLYIRPGSGGEVKFTRTGTTDVWADIRFGSWNAMSHEKYKNNIEKWNYNV LGIYKNDLVLHSYKVNSESDTLYARIHHGIVLRENSNLDQFPAEWRNGDGFDGNEVLWWNTKAVQELAFENDELRNKISD LENRLKILEDKLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28988; Mature: 28988
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKDISLQLMQTMKLVVLTSISDQNVVGNFEQLITMGGETSYANFRSNGIYAPWIDYNG CCCCHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHEECCCCCCCEECCCCEEEEEECCCC HIPGSHFYIRPAYGGEVRLTATGTTNNWANLRSDGIYAPWIDFNGQIPGSHLYIRPGSGG CCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECEECCCCCCCCCEEEEECCCCC EVKFTRTGTTDVWADIRFGSWNAMSHEKYKNNIEKWNYNVLGIYKNDLVLHSYKVNSESD EEEEEECCCCCEEEEEEECCCCCCCHHHHHCCHHHCCCEEEEEEECCEEEEEEEECCCCC TLYARIHHGIVLRENSNLDQFPAEWRNGDGFDGNEVLWWNTKAVQELAFENDELRNKISD EEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHH LENRLKILEDKLNG HHHHHHHHHHHCCC >Mature Secondary Structure MLTKDISLQLMQTMKLVVLTSISDQNVVGNFEQLITMGGETSYANFRSNGIYAPWIDYNG CCCCHHHHHHHHHEEEEEEEECCCCCCCCCHHHHHEECCCCCCCEECCCCEEEEEECCCC HIPGSHFYIRPAYGGEVRLTATGTTNNWANLRSDGIYAPWIDFNGQIPGSHLYIRPGSGG CCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECEECCCCCCCCCEEEEECCCCC EVKFTRTGTTDVWADIRFGSWNAMSHEKYKNNIEKWNYNVLGIYKNDLVLHSYKVNSESD EEEEEECCCCCEEEEEEECCCCCCCHHHHHCCHHHCCCEEEEEEECCEEEEEEEECCCCC TLYARIHHGIVLRENSNLDQFPAEWRNGDGFDGNEVLWWNTKAVQELAFENDELRNKISD EEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHH LENRLKILEDKLNG HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA