Definition Macrococcus caseolyticus JCSC5402, complete genome.
Accession NC_011999
Length 2,102,324

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The map label for this gene is 222151170

Identifier: 222151170

GI number: 222151170

Start: 1012553

End: 1013803

Strand: Direct

Name: 222151170

Synonym: MCCL_0921

Alternate gene names: NA

Gene position: 1012553-1013803 (Clockwise)

Preceding gene: 222151169

Following gene: 222151171

Centisome position: 48.16

GC content: 36.37

Gene sequence:

>1251_bases
ATGAGTAAATTGTCAAGACTTTATACAGAGAAGCAGATACAGATACTCAAGGACACGCAAAAACGTGATTGGTTCATGTT
AATAAATCATGGTGCAAAACGTACAGGTAAAACGATACTGAATAATGATTTGTTCTTACGTGAGTTGATACGTGTCAGAG
AGATAGCAGATAAAGAAGGATTAGAAACACCTCAGTACATTCTTGCAGGTGCAACGCTAGGAACGATACAGAAGAACGTA
CTAATAGAACTTACGAATAAATATGGATTAGAATTCAAGTTTGATAAATACAATTCATTCATGTTATTCGGTGTGCAGGT
CGTACAGACAGGTCATTCTAAAGTGAGTGGTATTGGTGCAATACGTGGTATGACTGCTTATGGTGCTTATATAAACGAAG
CATCACTTGCACATGAAGAAGTATTCGATGAGATTAAATCACGTTGCAGTGGTTATGGTGCACGTATATTAGTTGATACG
AACCCCGACCACCCCGAACATTGGCTGCTTAAAGATTATATTGAGAATACAGATGCTAAAGCAGGTATACTCAGCTATCA
ATTTAAGCTCGACGACAACACTTTTTTGAATGAACGATATAAACAGTCAATCAAAGCGAGTACCCCATCAGGCATGTTCT
ATGAGCGAAATATCAATGGTATGTGGGTAAGTGGTGACGGTGTTGTGTATTCTGACTTTGATTTGGAACAGAACACAATT
ACTGCCGATGAACTAAACGAGATACCGATGAAGGAATACTTCGCGGGTGTCGATTGGGGGTACGAGCACTATGGTTCAAT
CGTCGTTATGGCTAAAGATTTTAAAGAGAATCTATATCTTATTGAAGAACATGCACATCAACATAAATTTATTGATGAAT
GGGCGATGATTGCAAAAGATATAGAAGAAAGATACGGAAAAATTCCTTTTTATTGTGATACTGCAAGAACTGAACATATC
AAGAAGTTTAAAGATGAAGGGATTAACGCAGTTTACGCAAATAAAAATCGTATGGCAGGTGTAGAGCAGGTAGCTAAGTT
ATTTAAACTTAATTGCCTGTTTGTTGTATATGATCGTATGGATAGATTTAAACAAGAAATATATAAGTATGTATGGAATA
AAAACACTGGAGAACCTATTAAAGAGTTCGACGATGTATTAGACGCATTTAGATACGCTGTTTATACTCATACGTCCCAT
CAAAAACCACTATCAACAAACGACTTGATGAACATTAAGAGTCTTTTTTAA

Upstream 100 bases:

>100_bases
AAGTTGAATATCGAGAAACAAAGAAAAGAGTTGGCTAACGATCAATCACAAGAAGATAAGATTAAGCAATTACAAGATGC
CATTACAGAAGTGATTAATC

Downstream 100 bases:

>100_bases
GGAGGGAATATATTGAATTACAATTACAAAGAAAGTTATATCGCTAATGCGAATGATGACTTCACGATTAATAATGAAGA
AGATATCTATAACGCAGACG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase; Phage Terminase Large Subunit PBSX Family; Phage Terminase Large Subunit Pbsx Family; PBSX Family Phage Terminase Large Subunit; Bsr Protein; Terminase Large Subunit; Prophage Terminase Large Subunit; Terminase; Phage Terminase Large Subunit ATPase; Phage-Related Terminase Large Subunit

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSKLSRLYTEKQIQILKDTQKRDWFMLINHGAKRTGKTILNNDLFLRELIRVREIADKEGLETPQYILAGATLGTIQKNV
LIELTNKYGLEFKFDKYNSFMLFGVQVVQTGHSKVSGIGAIRGMTAYGAYINEASLAHEEVFDEIKSRCSGYGARILVDT
NPDHPEHWLLKDYIENTDAKAGILSYQFKLDDNTFLNERYKQSIKASTPSGMFYERNINGMWVSGDGVVYSDFDLEQNTI
TADELNEIPMKEYFAGVDWGYEHYGSIVVMAKDFKENLYLIEEHAHQHKFIDEWAMIAKDIEERYGKIPFYCDTARTEHI
KKFKDEGINAVYANKNRMAGVEQVAKLFKLNCLFVVYDRMDRFKQEIYKYVWNKNTGEPIKEFDDVLDAFRYAVYTHTSH
QKPLSTNDLMNIKSLF

Sequences:

>Translated_416_residues
MSKLSRLYTEKQIQILKDTQKRDWFMLINHGAKRTGKTILNNDLFLRELIRVREIADKEGLETPQYILAGATLGTIQKNV
LIELTNKYGLEFKFDKYNSFMLFGVQVVQTGHSKVSGIGAIRGMTAYGAYINEASLAHEEVFDEIKSRCSGYGARILVDT
NPDHPEHWLLKDYIENTDAKAGILSYQFKLDDNTFLNERYKQSIKASTPSGMFYERNINGMWVSGDGVVYSDFDLEQNTI
TADELNEIPMKEYFAGVDWGYEHYGSIVVMAKDFKENLYLIEEHAHQHKFIDEWAMIAKDIEERYGKIPFYCDTARTEHI
KKFKDEGINAVYANKNRMAGVEQVAKLFKLNCLFVVYDRMDRFKQEIYKYVWNKNTGEPIKEFDDVLDAFRYAVYTHTSH
QKPLSTNDLMNIKSLF
>Mature_415_residues
SKLSRLYTEKQIQILKDTQKRDWFMLINHGAKRTGKTILNNDLFLRELIRVREIADKEGLETPQYILAGATLGTIQKNVL
IELTNKYGLEFKFDKYNSFMLFGVQVVQTGHSKVSGIGAIRGMTAYGAYINEASLAHEEVFDEIKSRCSGYGARILVDTN
PDHPEHWLLKDYIENTDAKAGILSYQFKLDDNTFLNERYKQSIKASTPSGMFYERNINGMWVSGDGVVYSDFDLEQNTIT
ADELNEIPMKEYFAGVDWGYEHYGSIVVMAKDFKENLYLIEEHAHQHKFIDEWAMIAKDIEERYGKIPFYCDTARTEHIK
KFKDEGINAVYANKNRMAGVEQVAKLFKLNCLFVVYDRMDRFKQEIYKYVWNKNTGEPIKEFDDVLDAFRYAVYTHTSHQ
KPLSTNDLMNIKSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48298; Mature: 48167

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLSRLYTEKQIQILKDTQKRDWFMLINHGAKRTGKTILNNDLFLRELIRVREIADKEG
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCC
LETPQYILAGATLGTIQKNVLIELTNKYGLEFKFDKYNSFMLFGVQVVQTGHSKVSGIGA
CCCCHHHEECCHHHHHHHCEEEEEECCCCCEEEECCCCCEEEEEHHHHHCCCCHHHHHHH
IRGMTAYGAYINEASLAHEEVFDEIKSRCSGYGARILVDTNPDHPEHWLLKDYIENTDAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
AGILSYQFKLDDNTFLNERYKQSIKASTPSGMFYERNINGMWVSGDGVVYSDFDLEQNTI
CCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCEEEECCCCCCCCC
TADELNEIPMKEYFAGVDWGYEHYGSIVVMAKDFKENLYLIEEHAHQHKFIDEWAMIAKD
CHHHHHCCCHHHHHCCCCCCHHHHCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHH
IEERYGKIPFYCDTARTEHIKKFKDEGINAVYANKNRMAGVEQVAKLFKLNCLFVVYDRM
HHHHHCCCCEEECCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHEEHHHHH
DRFKQEIYKYVWNKNTGEPIKEFDDVLDAFRYAVYTHTSHQKPLSTNDLMNIKSLF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
SKLSRLYTEKQIQILKDTQKRDWFMLINHGAKRTGKTILNNDLFLRELIRVREIADKEG
CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHHHHCC
LETPQYILAGATLGTIQKNVLIELTNKYGLEFKFDKYNSFMLFGVQVVQTGHSKVSGIGA
CCCCHHHEECCHHHHHHHCEEEEEECCCCCEEEECCCCCEEEEEHHHHHCCCCHHHHHHH
IRGMTAYGAYINEASLAHEEVFDEIKSRCSGYGARILVDTNPDHPEHWLLKDYIENTDAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
AGILSYQFKLDDNTFLNERYKQSIKASTPSGMFYERNINGMWVSGDGVVYSDFDLEQNTI
CCEEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCEEEECCCCCCCCC
TADELNEIPMKEYFAGVDWGYEHYGSIVVMAKDFKENLYLIEEHAHQHKFIDEWAMIAKD
CHHHHHCCCHHHHHCCCCCCHHHHCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHH
IEERYGKIPFYCDTARTEHIKKFKDEGINAVYANKNRMAGVEQVAKLFKLNCLFVVYDRM
HHHHHCCCCEEECCHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHEEHHHHH
DRFKQEIYKYVWNKNTGEPIKEFDDVLDAFRYAVYTHTSHQKPLSTNDLMNIKSLF
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA