| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is pgsA [H]
Identifier: 222151123
GI number: 222151123
Start: 962183
End: 962764
Strand: Direct
Name: pgsA [H]
Synonym: MCCL_0874
Alternate gene names: 222151123
Gene position: 962183-962764 (Clockwise)
Preceding gene: 222151122
Following gene: 222151124
Centisome position: 45.77
GC content: 37.29
Gene sequence:
>582_bases ATGAATATACCAAATCAAATTACAGTAGCAAGGGTACTTTTAATACCGATATTTCTAGTATTCTTACTTTCAGATTTCAA TATGGGTGATATTTCTGTGCTCGGGTCTGAAGTGATGCGCATCGAACAGTTTATTGCAGCATTAATTTTTATTTTTGCTT CGCTGACGGACTGGATAGATGGCTATTTGGCGCGCAAATGGCAGCTCGTAACGAATATGGGGAAATTTCTAGATCCATTA GCAGATAAATTACTTGTTTCAAGTGGTCTGATAGCATTAGTCGAGCTTGATGCAATATCTTCATGGGTGGCAATTGTAAT TATTGCACGTGAATTTGCAGTTACAGGGCTTCGTCTTTTACAGATTGAACAAGGATTCGTGTCTGCAGCAGGACAATTAG GAAAGATCAAAACGGCTGTAACTATGCTTGCGATGACATTACTTTTGCTTAATGAACCATTTTCAGAGTGGACAGGTCTT AACAGTGGTTATCTTCTGATGTATGTAGCAGTATTCTTCACTGTATTATCTGGAATTGAATATTTTTATCACGGACGCGA TGTATTTAAAAATTCAAAGTAG
Upstream 100 bases:
>100_bases ATCAATAACCAGAAAGTTTCGGTTCCAAAGGAAGCGGAGAATCTTATCACACGAACTTATTTCTTCAAAGTTTCAAAAAA TTAGAGTTAGGATGAATAAA
Downstream 100 bases:
>100_bases CATAAAAAACATTTAGTATATTAGAAATACTAAATGTTTTTTATTGCAATAATTAAATTTTAGACGTGTTATTTTTCAGT TTTCTCAAGTATCACCGTAA
Product: phosphatidylglycerophosphate synthase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNIPNQITVARVLLIPIFLVFLLSDFNMGDISVLGSEVMRIEQFIAALIFIFASLTDWIDGYLARKWQLVTNMGKFLDPL ADKLLVSSGLIALVELDAISSWVAIVIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMLAMTLLLLNEPFSEWTGL NSGYLLMYVAVFFTVLSGIEYFYHGRDVFKNSK
Sequences:
>Translated_193_residues MNIPNQITVARVLLIPIFLVFLLSDFNMGDISVLGSEVMRIEQFIAALIFIFASLTDWIDGYLARKWQLVTNMGKFLDPL ADKLLVSSGLIALVELDAISSWVAIVIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMLAMTLLLLNEPFSEWTGL NSGYLLMYVAVFFTVLSGIEYFYHGRDVFKNSK >Mature_193_residues MNIPNQITVARVLLIPIFLVFLLSDFNMGDISVLGSEVMRIEQFIAALIFIFASLTDWIDGYLARKWQLVTNMGKFLDPL ADKLLVSSGLIALVELDAISSWVAIVIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMLAMTLLLLNEPFSEWTGL NSGYLLMYVAVFFTVLSGIEYFYHGRDVFKNSK
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=191, Percent_Identity=38.2198952879581, Blast_Score=100, Evalue=8e-23, Organism=Drosophila melanogaster, GI24650130, Length=113, Percent_Identity=35.3982300884956, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650126, Length=113, Percent_Identity=35.3982300884956, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24650128, Length=113, Percent_Identity=35.3982300884956, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21477; Mature: 21477
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPNQITVARVLLIPIFLVFLLSDFNMGDISVLGSEVMRIEQFIAALIFIFASLTDWID CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYLARKWQLVTNMGKFLDPLADKLLVSSGLIALVELDAISSWVAIVIIAREFAVTGLRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIEQGFVSAAGQLGKIKTAVTMLAMTLLLLNEPFSEWTGLNSGYLLMYVAVFFTVLSGIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHH YFYHGRDVFKNSK HHHCCHHHHCCCC >Mature Secondary Structure MNIPNQITVARVLLIPIFLVFLLSDFNMGDISVLGSEVMRIEQFIAALIFIFASLTDWID CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYLARKWQLVTNMGKFLDPLADKLLVSSGLIALVELDAISSWVAIVIIAREFAVTGLRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QIEQGFVSAAGQLGKIKTAVTMLAMTLLLLNEPFSEWTGLNSGYLLMYVAVFFTVLSGIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHH YFYHGRDVFKNSK HHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA