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The map label for this gene is xerC [H]

Identifier: 222151085

GI number: 222151085

Start: 913058

End: 913930

Strand: Direct

Name: xerC [H]

Synonym: MCCL_0836

Alternate gene names: 222151085

Gene position: 913058-913930 (Clockwise)

Preceding gene: 222151084

Following gene: 222151086

Centisome position: 43.43

GC content: 38.49

Gene sequence:

>873_bases
ATGGATACTAATGATTTGCAAAGATTCTTAACTTACTTGAAGAATGAGCGTAATTTTTCAGACCATACTGTTACTGCCTA
TAAAAATGATGTATTGCAGTTTATTGCGTTTTTAGAACAGGAACAGTTAGATTTTAGAACTTTTGAATATCGTGATGCGA
GAAATTACCTCGTGAGTCAATATAATAAAGGGCTTGAACGTACGACGGTGTCGAGAAGAATTTCTGCATTACGCTCTTTT
TATGGGTTTTTATATGATGGAGATGAAAGTAATCCCTTTGTACAGCTTGTTCATCCGAAACAAAAGAAGTATCTACCCGA
GTTCTTCTATGAAAAAGAGATGACTTTATTGTTTAATAGTATCGATATGTCAAAACCCTTCGCAGTAAGGGATAAGTTTA
TACTTGAAATGCTGTATGCTACGGGAATGCGTGTTTCGGAGTTCATTGAGCTGAAGAGTGATGCGTTCGATCTGGGACTT
ATGACAGTAAAGGTGATGGGTAAAGGGCGTAAAGAAAGAATTATCCCCTATGGTGCCTATGCACATCGGTCACTACTAGA
TTATATGGATTTTAGAAACAGCATGACGATAACGCATGACTATCTACTGATCAATCAGCGGGGAGGCCCTCTGACTGCCA
GGGGACTGACGTATATTCTTGATATGCTGATTAAGAGGAGCAGTGCGGATGGACATATCCACCCCCATAAATTAAGACAT
ACATTCGCAACACACTTATTGAATAACGGAGCAGATTTGCGTACTGTTCAGGAATTGCTTGGCCATGTCAATTTATCGAC
AACAAGCAAATATACGCATATAACGAAAGCACACTTAAGAAATTCATATTTAAGCGCACATCCAAGAGCATAA

Upstream 100 bases:

>100_bases
GTGCCTTAGCCTCTTTAGAACATTTTAAAGTTACTTTATAGTGTTTTAGTTGTGTGTCAATTTTAAATTGTGATAGAATT
CAGATAAATAGGAGGGCTGT

Downstream 100 bases:

>100_bases
GGAGTGGAAGAATGAATAATCAATTACATGCTACGACAATCTTTGCAATCAGACATAATGGTCGAGCGGCGATGAGCGGT
GATGGACAAGTGACACTCGG

Product: tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MDTNDLQRFLTYLKNERNFSDHTVTAYKNDVLQFIAFLEQEQLDFRTFEYRDARNYLVSQYNKGLERTTVSRRISALRSF
YGFLYDGDESNPFVQLVHPKQKKYLPEFFYEKEMTLLFNSIDMSKPFAVRDKFILEMLYATGMRVSEFIELKSDAFDLGL
MTVKVMGKGRKERIIPYGAYAHRSLLDYMDFRNSMTITHDYLLINQRGGPLTARGLTYILDMLIKRSSADGHIHPHKLRH
TFATHLLNNGADLRTVQELLGHVNLSTTSKYTHITKAHLRNSYLSAHPRA

Sequences:

>Translated_290_residues
MDTNDLQRFLTYLKNERNFSDHTVTAYKNDVLQFIAFLEQEQLDFRTFEYRDARNYLVSQYNKGLERTTVSRRISALRSF
YGFLYDGDESNPFVQLVHPKQKKYLPEFFYEKEMTLLFNSIDMSKPFAVRDKFILEMLYATGMRVSEFIELKSDAFDLGL
MTVKVMGKGRKERIIPYGAYAHRSLLDYMDFRNSMTITHDYLLINQRGGPLTARGLTYILDMLIKRSSADGHIHPHKLRH
TFATHLLNNGADLRTVQELLGHVNLSTTSKYTHITKAHLRNSYLSAHPRA
>Mature_290_residues
MDTNDLQRFLTYLKNERNFSDHTVTAYKNDVLQFIAFLEQEQLDFRTFEYRDARNYLVSQYNKGLERTTVSRRISALRSF
YGFLYDGDESNPFVQLVHPKQKKYLPEFFYEKEMTLLFNSIDMSKPFAVRDKFILEMLYATGMRVSEFIELKSDAFDLGL
MTVKVMGKGRKERIIPYGAYAHRSLLDYMDFRNSMTITHDYLLINQRGGPLTARGLTYILDMLIKRSSADGHIHPHKLRH
TFATHLLNNGADLRTVQELLGHVNLSTTSKYTHITKAHLRNSYLSAHPRA

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=289, Percent_Identity=38.4083044982699, Blast_Score=197, Evalue=8e-52,
Organism=Escherichia coli, GI1789261, Length=297, Percent_Identity=35.6902356902357, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33919; Mature: 33919

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTNDLQRFLTYLKNERNFSDHTVTAYKNDVLQFIAFLEQEQLDFRTFEYRDARNYLVSQ
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
YNKGLERTTVSRRISALRSFYGFLYDGDESNPFVQLVHPKQKKYLPEFFYEKEMTLLFNS
HHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHH
IDMSKPFAVRDKFILEMLYATGMRVSEFIELKSDAFDLGLMTVKVMGKGRKERIIPYGAY
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCCCCHH
AHRSLLDYMDFRNSMTITHDYLLINQRGGPLTARGLTYILDMLIKRSSADGHIHPHKLRH
HHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TFATHLLNNGADLRTVQELLGHVNLSTTSKYTHITKAHLRNSYLSAHPRA
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDTNDLQRFLTYLKNERNFSDHTVTAYKNDVLQFIAFLEQEQLDFRTFEYRDARNYLVSQ
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
YNKGLERTTVSRRISALRSFYGFLYDGDESNPFVQLVHPKQKKYLPEFFYEKEMTLLFNS
HHCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEEEEECCHHHHHCHHHHHHHHHHHHHHH
IDMSKPFAVRDKFILEMLYATGMRVSEFIELKSDAFDLGLMTVKVMGKGRKERIIPYGAY
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHEEEECCCCCCCCCCCCCHH
AHRSLLDYMDFRNSMTITHDYLLINQRGGPLTARGLTYILDMLIKRSSADGHIHPHKLRH
HHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TFATHLLNNGADLRTVQELLGHVNLSTTSKYTHITKAHLRNSYLSAHPRA
HHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA