| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222151037
Identifier: 222151037
GI number: 222151037
Start: 852761
End: 853771
Strand: Direct
Name: 222151037
Synonym: MCCL_0788
Alternate gene names: NA
Gene position: 852761-853771 (Clockwise)
Preceding gene: 222151036
Following gene: 222151038
Centisome position: 40.56
GC content: 42.14
Gene sequence:
>1011_bases GTGGATATTTTAATTGGAACAGGTTTCTTACTCCTTGTCCTTGTGCTGTTTACGTTATTTACATATAAAGCACCATCCGG TATGAAAGCAATGGGGGCATTAGCGAATGCAGCGATTGCAACATTTCTTGTCGAGGCGTTTCAGAAATACGTTGGTGGAA ATATATTTGGCATAAAGTTTCTAGAAGAATTAGGAGATACAGCTGGAAGTCTTGGTGGTGTAGCAGCGGCTGGTTTAGTT GCTTTATCTATTGGTGTATCTCCGGTTTACGCACTCGTTATAGCAGCAAGTTGTGGCGGCCTTGATTTATTGCCCGGGTT CGTTGCAGGGTATGTTGTTGGTCATCTAATGAAATATGCTGAAAAATATGTACCTGAAGGTGTCGATTTAATTGTAGGCA TTATCATTATTGCGCCACTTGCACGAATGCTGGCAATGTTTGTTACACCTTTAGTTAATAATACATTAATTAAAATTGGG GAAGTCATACAGCAATCTACAGATGCAAGTCCACTTGTTATGGGGTTTGTGCTTGGTGGTATTATTACGGTTGTAGGAAC AGCGCCACTAAGCTCGATGGCGCTAACAGCACTTCTTGGCCTGACTGGGTTACCGATGGCGATTGCTGCAATGGTATCAT TCAGTTCGGCGTTTATTAATTCAACGATGTTCTATAAATTGAAGCTAGGAGACCGTGCTTCTATCGTGGCTGTAGGTATC GAGCCTTTATCACAGGCAGATATTATATCTTTAAACCCTGTACCGATCTATTCTTGTAACTTTATCGGGGGCGCACTTGC GGGTATGGTTATTGCACATTCTGGAATGGTTAATGATGCACCTGGAACAGCGAGTCCTCTAGCCGGATTTCTAGTGATGT TCGGATTTAATGAGCCGCTTCAGATTATTGGATGGGGTAGCGTTATTGCGGTAATCTGTCTAATTGTCGGGCTAGTAGGA AGTCGTATATTCAAAGCTTATCCTCTGCGCAGGAAATCAGAATTTATATAA
Upstream 100 bases:
>100_bases TTCATAAAAAGTGTAAAATGTATGATACGATGATCGATTTTTTTTGTTACTATAGAAAGAACACATGTGTATATTATAAA AGCATGAAGGGATTGTTAAT
Downstream 100 bases:
>100_bases TTGATTTATACATCTAAAGTATGACAGTATGACATTATCTTTTTACATATTATTAATGGTATAATAGTATAGAATTTTGA TATAAGGAGATAACATATGT
Product: regulatory protein
Products: NA
Alternate protein names: Regulatory Protein; Regulatory Protein PfoR; Transcriptional Regulator; Perfringolysin O Regulatory Protein; Transcriptional Regulator PfoR
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MDILIGTGFLLLVLVLFTLFTYKAPSGMKAMGALANAAIATFLVEAFQKYVGGNIFGIKFLEELGDTAGSLGGVAAAGLV ALSIGVSPVYALVIAASCGGLDLLPGFVAGYVVGHLMKYAEKYVPEGVDLIVGIIIIAPLARMLAMFVTPLVNNTLIKIG EVIQQSTDASPLVMGFVLGGIITVVGTAPLSSMALTALLGLTGLPMAIAAMVSFSSAFINSTMFYKLKLGDRASIVAVGI EPLSQADIISLNPVPIYSCNFIGGALAGMVIAHSGMVNDAPGTASPLAGFLVMFGFNEPLQIIGWGSVIAVICLIVGLVG SRIFKAYPLRRKSEFI
Sequences:
>Translated_336_residues MDILIGTGFLLLVLVLFTLFTYKAPSGMKAMGALANAAIATFLVEAFQKYVGGNIFGIKFLEELGDTAGSLGGVAAAGLV ALSIGVSPVYALVIAASCGGLDLLPGFVAGYVVGHLMKYAEKYVPEGVDLIVGIIIIAPLARMLAMFVTPLVNNTLIKIG EVIQQSTDASPLVMGFVLGGIITVVGTAPLSSMALTALLGLTGLPMAIAAMVSFSSAFINSTMFYKLKLGDRASIVAVGI EPLSQADIISLNPVPIYSCNFIGGALAGMVIAHSGMVNDAPGTASPLAGFLVMFGFNEPLQIIGWGSVIAVICLIVGLVG SRIFKAYPLRRKSEFI >Mature_336_residues MDILIGTGFLLLVLVLFTLFTYKAPSGMKAMGALANAAIATFLVEAFQKYVGGNIFGIKFLEELGDTAGSLGGVAAAGLV ALSIGVSPVYALVIAASCGGLDLLPGFVAGYVVGHLMKYAEKYVPEGVDLIVGIIIIAPLARMLAMFVTPLVNNTLIKIG EVIQQSTDASPLVMGFVLGGIITVVGTAPLSSMALTALLGLTGLPMAIAAMVSFSSAFINSTMFYKLKLGDRASIVAVGI EPLSQADIISLNPVPIYSCNFIGGALAGMVIAHSGMVNDAPGTASPLAGFLVMFGFNEPLQIIGWGSVIAVICLIVGLVG SRIFKAYPLRRKSEFI
Specific function: Unknown
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34713; Mature: 34713
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILIGTGFLLLVLVLFTLFTYKAPSGMKAMGALANAAIATFLVEAFQKYVGGNIFGIKF CCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LEELGDTAGSLGGVAAAGLVALSIGVSPVYALVIAASCGGLDLLPGFVAGYVVGHLMKYA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EKYVPEGVDLIVGIIIIAPLARMLAMFVTPLVNNTLIKIGEVIQQSTDASPLVMGFVLGG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IITVVGTAPLSSMALTALLGLTGLPMAIAAMVSFSSAFINSTMFYKLKLGDRASIVAVGI HHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECC EPLSQADIISLNPVPIYSCNFIGGALAGMVIAHSGMVNDAPGTASPLAGFLVMFGFNEPL CCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCH QIIGWGSVIAVICLIVGLVGSRIFKAYPLRRKSEFI HEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MDILIGTGFLLLVLVLFTLFTYKAPSGMKAMGALANAAIATFLVEAFQKYVGGNIFGIKF CCEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LEELGDTAGSLGGVAAAGLVALSIGVSPVYALVIAASCGGLDLLPGFVAGYVVGHLMKYA HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EKYVPEGVDLIVGIIIIAPLARMLAMFVTPLVNNTLIKIGEVIQQSTDASPLVMGFVLGG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IITVVGTAPLSSMALTALLGLTGLPMAIAAMVSFSSAFINSTMFYKLKLGDRASIVAVGI HHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECC EPLSQADIISLNPVPIYSCNFIGGALAGMVIAHSGMVNDAPGTASPLAGFLVMFGFNEPL CCCCCCCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCH QIIGWGSVIAVICLIVGLVGSRIFKAYPLRRKSEFI HEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA