| Definition | Macrococcus caseolyticus JCSC5402, complete genome. |
|---|---|
| Accession | NC_011999 |
| Length | 2,102,324 |
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The map label for this gene is 222150927
Identifier: 222150927
GI number: 222150927
Start: 730798
End: 731688
Strand: Direct
Name: 222150927
Synonym: MCCL_0677
Alternate gene names: NA
Gene position: 730798-731688 (Clockwise)
Preceding gene: 222150926
Following gene: 222150928
Centisome position: 34.76
GC content: 26.6
Gene sequence:
>891_bases ATGAAATTGCTAATTACTGGAGCTACAGGACATTCAGGATTATTTTTTTTAGAACATTTAAATAACAATTCACAAAAAAT TTCAGAAGTTATTTGTGTAGTACGAAAAACATCTAACTTAAATTCACTAAAAAAATTTACAAATTTAAATCTTTCAACTA TTGAAGGTAATTTGACAGATGAATTATTTATTGACCAAGCAACTAAAGGTGTGGATGTGATACTAAATATTGCAAATATA AGATTTTCTGAGCTATTTATGCGATATGGATATAAAAATAATGTTAAGTGGCTCATCGGAATTCATACAACAGGTAGATA TTCAAAATTTAAATCTGCTTCTGCTGAATATATCGCTATTGAAGACAATTTACTTAATAACAGAAAAATTGATTTAACAA TTTTAAGACCTACAATGATTTATGGTAGCATGAAAGATCATAATATGAGTAAATTAATTAAATTTCTTGATAAATGCCCT ATATTCCCTATATTCGGAAATGGTAAAAATTTATTACAACCCGTTAGAGCTCAAGATTTAGGTAAAGCCTATTATGATGT TTTGAATAATTATGAAACGTGCAAAAATAAAGAATATGATTTGTCTGGTAAAGATGAGGTGGAATACATTGAAATTCTAA ATCTCATAACGAAAAAACTTAATAAGAAAGTCAAATATATTAAAATCCCTATTAACCTTTCTTATAAAATTGCAAATTTT GGACAAAAATATATACCTAAGTTTCCGATAAAAGGAGAACAGGTGTTGCGTATGCAAGAAGACAAGGTATATAGTCATGA TAATGCAGTATCAGATTTTAATTATTCTCCAATGTCTTTTAAAGAAGGAATCAATTTAGAAGTTGAAGAATATATAAACA ATTACAGATAG
Upstream 100 bases:
>100_bases AAACAAAAAGGTTACGAGAGAGCAAAAGAATTATATGATGAAGAAAAAGTAGTAGCAACACAGATAGATATATTCAAAAA AGTAACTAGGGGATGAGAAA
Downstream 100 bases:
>100_bases GTGAAAAAAATGATAAAAAGATCTTTTGATTTTGTGTCGGCTTCTGCAGGAATATTGGCACTTTCTCCAATAATGATTGT CACTGCTTTGGCTATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases-Like Protein; NmrA-Like Protein; Methyltransferase FkbM; NAD Dependent Epimerase/Dehydratase Family
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKLLITGATGHSGLFFLEHLNNNSQKISEVICVVRKTSNLNSLKKFTNLNLSTIEGNLTDELFIDQATKGVDVILNIANI RFSELFMRYGYKNNVKWLIGIHTTGRYSKFKSASAEYIAIEDNLLNNRKIDLTILRPTMIYGSMKDHNMSKLIKFLDKCP IFPIFGNGKNLLQPVRAQDLGKAYYDVLNNYETCKNKEYDLSGKDEVEYIEILNLITKKLNKKVKYIKIPINLSYKIANF GQKYIPKFPIKGEQVLRMQEDKVYSHDNAVSDFNYSPMSFKEGINLEVEEYINNYR
Sequences:
>Translated_296_residues MKLLITGATGHSGLFFLEHLNNNSQKISEVICVVRKTSNLNSLKKFTNLNLSTIEGNLTDELFIDQATKGVDVILNIANI RFSELFMRYGYKNNVKWLIGIHTTGRYSKFKSASAEYIAIEDNLLNNRKIDLTILRPTMIYGSMKDHNMSKLIKFLDKCP IFPIFGNGKNLLQPVRAQDLGKAYYDVLNNYETCKNKEYDLSGKDEVEYIEILNLITKKLNKKVKYIKIPINLSYKIANF GQKYIPKFPIKGEQVLRMQEDKVYSHDNAVSDFNYSPMSFKEGINLEVEEYINNYR >Mature_296_residues MKLLITGATGHSGLFFLEHLNNNSQKISEVICVVRKTSNLNSLKKFTNLNLSTIEGNLTDELFIDQATKGVDVILNIANI RFSELFMRYGYKNNVKWLIGIHTTGRYSKFKSASAEYIAIEDNLLNNRKIDLTILRPTMIYGSMKDHNMSKLIKFLDKCP IFPIFGNGKNLLQPVRAQDLGKAYYDVLNNYETCKNKEYDLSGKDEVEYIEILNLITKKLNKKVKYIKIPINLSYKIANF GQKYIPKFPIKGEQVLRMQEDKVYSHDNAVSDFNYSPMSFKEGINLEVEEYINNYR
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34175; Mature: 34175
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLITGATGHSGLFFLEHLNNNSQKISEVICVVRKTSNLNSLKKFTNLNLSTIEGNLTD CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCH ELFIDQATKGVDVILNIANIRFSELFMRYGYKNNVKWLIGIHTTGRYSKFKSASAEYIAI HHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEE EDNLLNNRKIDLTILRPTMIYGSMKDHNMSKLIKFLDKCPIFPIFGNGKNLLQPVRAQDL ECCCCCCCEEEEEEECCEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH GKAYYDVLNNYETCKNKEYDLSGKDEVEYIEILNLITKKLNKKVKYIKIPINLSYKIANF HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECC GQKYIPKFPIKGEQVLRMQEDKVYSHDNAVSDFNYSPMSFKEGINLEVEEYINNYR CHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCEEHHHHHCCCC >Mature Secondary Structure MKLLITGATGHSGLFFLEHLNNNSQKISEVICVVRKTSNLNSLKKFTNLNLSTIEGNLTD CEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCH ELFIDQATKGVDVILNIANIRFSELFMRYGYKNNVKWLIGIHTTGRYSKFKSASAEYIAI HHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCCCEEEE EDNLLNNRKIDLTILRPTMIYGSMKDHNMSKLIKFLDKCPIFPIFGNGKNLLQPVRAQDL ECCCCCCCEEEEEEECCEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH GKAYYDVLNNYETCKNKEYDLSGKDEVEYIEILNLITKKLNKKVKYIKIPINLSYKIANF HHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECC GQKYIPKFPIKGEQVLRMQEDKVYSHDNAVSDFNYSPMSFKEGINLEVEEYINNYR CHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA